XP_002160322.1 (Hydra magnipapillata)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 XP_002160322.1 T59065_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
XP_002160322.1 RRM 19 86

Links

Other RRM family RBPs
Other Hydra magnipapillata RBPs

136 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
ENSLAFG00000029423 Loxodonta africana ENSLAFG00000029423 N 0.882
SF3B14 Gallus gallus ENSGALG00000016501 N 0.882
ENSMGAG00000014057 Meleagris gallopavo ENSMGAG00000014057 N 0.882
ENSMLUG00000002473 Myotis lucifugus ENSMLUG00000002473 N 0.882
XM_001098393.1 Macaca mulatta ENSMMUG00000001282 N 0.882
AC008073.5 Homo sapiens ENSG00000115128 N 0.882
ENSFCAG00000004304 Felis catus ENSFCAG00000004304 N 0.882
ENSCPOG00000008016 Cavia porcellus ENSCPOG00000008016 N 0.882
LOC100386467 Callithrix jacchus ENSCJAG00000007716 N 0.882
sf3b14 Danio rerio ENSDARG00000009753 N 0.882
ENSDNOG00000007148 Dasypus novemcinctus ENSDNOG00000007148 N 0.882
0610009D07Rik Dipodomys ordii ENSDORG00000009772 N 0.882
0610009D07Rik Mus musculus ENSMUSG00000037361 N 0.882
ENSOANG00000007627 Ornithorhynchus anatinus ENSOANG00000007627 N 0.882
SF3B14 Taeniopygia guttata ENSTGUG00000013191 N 0.882
ENSTBEG00000012532 Tupaia belangeri ENSTBEG00000012532 N 0.882
ENSTSYG00000013978 Tarsius syrichta ENSTSYG00000013978 N 0.882
ENSTTRG00000013430 Tursiops truncatus ENSTTRG00000013430 N 0.882
ENSVPAG00000005546 Vicugna pacos ENSVPAG00000005546 N 0.882
ENSSSCG00000008587 Sus scrofa ENSSSCG00000008587 N 0.882
ENSSARG00000011902 Sorex araneus ENSSARG00000011902 N 0.882
ENSOCUG00000022008 Oryctolagus cuniculus ENSOCUG00000022008 N 0.882
ENSPPYG00000012603 Pongo pygmaeus ENSPPYG00000012603 N 0.882
XM_515324.2 Pan troglodytes ENSPTRG00000011709 N 0.882
ENSPVAG00000011346 Pteropus vampyrus ENSPVAG00000011346 N 0.882
ENSCHOG00000000689 Choloepus hoffmanni ENSCHOG00000000689 N 0.882
LOC100056247 Equus caballus ENSECAG00000015618 N 0.882
ENSACAG00000011677 Anolis carolinensis ENSACAG00000011677 N 0.882
amel4_ncbi_hmm5835 Tribolium castaneum amel4_ncbi_hmm5835 N 0.882
Ame_R001592 Ailuropoda melanoleuca Ame_R001592 N 0.882
amel4_ncbi_hmm5835 Apis mellifera amel4_ncbi_hmm5835 N 0.882
nasonia_NCBI_hmm146063 Nasonia vitripennis nasonia_NCBI_hmm146063 N 0.882
XM_532889.2 Canis familiaris ENSCAFG00000003957 N 0.882
Q2KIQ7_BOVIN Bos taurus ENSBTAG00000003407 N 0.882
nasonia_NCBI_hmm648054 Nasonia vitripennis nasonia_NCBI_hmm648054 N 0.882
DGIL_AUG5s10565g5t1 Acyrtosiphon pisum DGIL_AUG5s10565g5t1 N 0.868
ENSTRUG00000006551 Takifugu rubripes ENSTRUG00000006551 N 0.868
ISCW024082 Ixodes scapularis ISCW024082 N 0.868
sf3b14 Xenopus tropicalis ENSXETG00000018204 N 0.868
XM_001364269.1 Monodelphis domestica ENSMODG00000002144 N 0.868
ENSTNIG00000009719 Tetraodon nigroviridis ENSTNIG00000009719 N 0.868
ENSORLG00000015955 Oryzias latipes ENSORLG00000015955 N 0.868
ENSCSAVG00000008970 Ciona savignyi ENSCSAVG00000008970 N 0.868
ENSCING00000012689 Ciona intestinalis ENSCING00000012689 N 0.868
estExt_GenewiseH_1.C_6800062 Branchiostoma floridae estExt_GenewiseH_1.C_6800062 N 0.868
ENSGACG00000004803 Gasterosteus aculeatus ENSGACG00000004803 N 0.853
estExt_fgenesh1_pg.C_1580052 Nematostella vectensis estExt_fgenesh1_pg.C_1580052 N 0.853
AAH57709 Xenopus laevis AAH57709 N 0.853
CPIJ008576 Culex quinquefasciatus CPIJ008576 N 0.838
SNAPOd2T00023714001 Oikopleura dioica SNAPOd2T00023714001 N 0.838
PHUM617060 Pediculus humanus PHUM617060 N 0.838
CpipJ_CPIJ008576 Culex pipiens CpipJ_CPIJ008576 N 0.838
estExt_fgenesh2_kg.C_sca_670005 Lottia gigantea estExt_fgenesh2_kg.C_sca_670005 N 0.838
AAEL005909 Aedes aegypti AAEL005909 N 0.838
estExt_fgenesh1_kg.C_20004 Daphnia pulex estExt_fgenesh1_kg.C_20004 N 0.826
s_454910 Phytophthora sojae s_454910 N 0.826
PITG_10282 Phytophthora infestans PITG_10282 N 0.826
estExt_fgenesh1_pg.C_130126 Phytophthora capsici estExt_fgenesh1_pg.C_130126 N 0.826
68671 Helobdella robusta 68671 N 0.824
AGAP002780 Anopheles gambiae AGAP002780 N 0.824
fgeneshTA2_pm.C_scaffold_21000029 Trichoplax adhaerens fgeneshTA2_pm.C_scaffold_21000029 N 0.812
GRMZM2G358416 Zea mays GRMZM2G358416 N 0.809
SB01G003790 Sorghum bicolor Sb01g003790 N 0.809
Sjc_0071370 Schistosoma japonicum Sjc_0071370 N 0.809
e_gw1.17.197.1 Volvox carteri e_gw1.17.197.1 N 0.809
GRMZM2G107745 Zea mays GRMZM2G107745 N 0.809
Smp_032060 Schistosoma mansoni Smp_032060 N 0.809
GJ12004 Drosophila virilis FBgn0199256 N 0.797
GK17258 Drosophila willistoni FBgn0219257 N 0.797
fgenesh1_pm.C_scaffold_108000003 Phytophthora ramorum fgenesh1_pm.C_scaffold_108000003 N 0.797
GD13137 Drosophila simulans FBgn0184859 N 0.797
GH16287 Drosophila grimshawi FBgn0123758 N 0.797
GF10910 Drosophila ananassae FBgn0087950 N 0.797
GA12181-RA Drosophila pseudoobscura FBgn0072229 N 0.797
GM13852 Drosophila sechellia FBgn0168783 N 0.797
GG14070 Drosophila erecta FBgn0106332 N 0.797
GE20495 Drosophila yakuba FBgn0068445 N 0.797
GL22529 Drosophila persimilis FBgn0160121 N 0.797
CG13298 Drosophila melanogaster FBgn0035692 N 0.797
GI13232 Drosophila mojavensis FBgn0135989 N 0.797
estExt_fgenesh1_pg.C_2760028 Capitella teleta estExt_fgenesh1_pg.C_2760028 N 0.794
Minc01156 Meloidogyne incognita Minc01156 N 0.794
BGIOSIBCE013412 Oryza indica BGIOSIBCE013412 N 0.794
estExt_Genewise1Plus.C_10491 Micromonas pusilla estExt_Genewise1Plus.C_10491 N 0.794
SPRG_00106 Saprolegnia parasitica SPRG_00106 N 0.794
BRADI1G04240 Brachypodium distachyon BRADI1G04240 N 0.794
LOC_Os03g59710 Oryza sativa LOC_Os03g59710 N 0.794
ENSCHOG00000013886 Choloepus hoffmanni ENSCHOG00000013886 N 0.779
Aqu1.214150 Amphimedon queenslandica Aqu1.214150 N 0.779
estExt_Genewise1.C_630098 Physcomitrella patens estExt_Genewise1.C_630098 N 0.779
estExt_fgenesh2_pg.C_240194 Selaginella moellendorfii estExt_fgenesh2_pg.C_240194 N 0.779
PPA24922 Pristionchus pacificus PPA24922 N 0.779
B9HNI9_POPTR Populus trichocarpa POPTR_0009s07180 N 0.779
e_gw1.13.49.1 Emiliania huxleyi e_gw1.13.49.1 N 0.768
estExt_GenewiseW_1.C_340090 Chlamydomonas reinhardtii estExt_GenewiseW_1.C_340090 N 0.765
estExt_Genewise1Plus.C_10695 Chlorella NC64A estExt_Genewise1Plus.C_10695 N 0.765
PK21780.1 Cannabis sativa PK21780.1 N 0.765
29868.m000351 Ricinus communis 29868.m000351 N 0.765
EDO06533.1 Babesia bovis EDO06533.1 N 0.765
ppa013407m Prunus persica ppa013407m N 0.765
B9GG60_POPTR Populus trichocarpa POPTR_0001s28000 N 0.765
GSVIVG00037329001 Vitis vinifera GSVIVG00037329001 N 0.765
MDP0000185506 Malus x domestica MDP0000185506 N 0.765
ppa013405m Prunus persica ppa013405m N 0.765
estExt_Genemark1.C_140122 Coccomyxa C 169 estExt_Genemark1.C_140122 N 0.765
cassava30358.valid.m1 Manihot esculenta cassava30358.valid.m1 N 0.765
estExt_fgeneshCV_pm.C_140033 Chlorella vulgaris estExt_fgeneshCV_pm.C_140033 N 0.765
PHATR_8132 Phaeodactylum tricornutum Phatr8132 N 0.754
LOAG_04189 Loa loa LOAG_04189 N 0.754
C50D2.5 Caenorhabditis elegans C50D2.5 N 0.750
CBG06987 Caenorhabditis briggsae CBG06987 N 0.750
CRE22109 Caenorhabditis remanei CRE22109 N 0.750
DDB_G0286297 Dictyostelium discoideum DDB_G0286297 N 0.750
CBN08400 Caenorhabditis brenneri CBN08400 N 0.750
Medtr5g096400 Medicago truncatula Medtr5g096400 N 0.739
AT5G12190 Arabidopsis thaliana AT5G12190-TAIR-G N 0.739
XM_002873508.1 Arabidopsis lyrata scaffold_601250.1 N 0.739
chr2.CM0308.280.nc Lotus japonicus chr2.CM0308.280.nc N 0.739
Glyma02g44710.1 Glycine max Glyma02g44710.1 N 0.739
mgf016428m Mimulus guttatus mgf016428m N 0.739
Glyma14g04020.1 Glycine max Glyma14g04020.1 N 0.735
CJA01433 Caenorhabditis japonica CJA01433 N 0.735
TA13725 Theileria annulata TA13725 N 0.735
MDP0000916880 Malus x domestica MDP0000916880 N 0.735
PCHAS_144180 Plasmodium chabaudi PCHAS_144180 N 0.725
Cucsa.086930 Cucumis sativus Cucsa.086930 N 0.725
PFL1200c Plasmodium falciparum PFL1200c N 0.721
PVX_123875 Plasmodium vivax PVX_123875 N 0.721
PKH_144160 Plasmodium knowlesi PKH_144160 N 0.721
eugene.1500010066 Ostreococcus lucimarinus eugene.1500010066 N 0.721
32497 Aureococcus anophagefferens 32497 N 0.716
THAPSDRAFT_20086 Thalassiosira pseudonana Thaps20086 N 0.710
PBANKA_143980 Plasmodium berghei PBANKA_143980 N 0.710
160.m00066 Tetrahymena thermophila 160.m00066 N 0.710
e_gw1.11.964.1 Ostreococcus RCC809 e_gw1.11.964.1 N 0.706
GSPATP00004048001 Paramecium tetraurelia GSPATP00004048001 N 0.706