Q2KI16_BOVIN (Bos taurus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSBTAG00000008937 T34823_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
bru-3
M117_0.6 		Drosophila melanogaster KUGKUGU RNAcompete
Ray et al.(2013)
RNCMPT00122 		0.729
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSBTAP00000011768 RRM 23 91
ENSBTAP00000011768 RRM 314 384
ENSBTAP00000045811 RRM 36 104
ENSBTAP00000045832 RRM 37 105
ENSBTAP00000053798 RRM 36 106
ENSBTAP00000053798 RRM 127 195
ENSBTAP00000053798 RRM 436 506

Links

Other RRM family RBPs
Other Bos taurus RBPs

140 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
DGIL_AUG5s6024g1t1 Acyrtosiphon pisum DGIL_AUG5s6024g1t1 N 0.704
AAEL000695 Aedes aegypti AAEL000695 I 0.721
AAEL014033 Aedes aegypti AAEL014033 I 0.721
Ame_R017712 Ailuropoda melanoleuca Ame_R017712 N 0.976
Ame_R009875 Ailuropoda melanoleuca Ame_R009875 N 0.896
CELF2 Anolis carolinensis ENSACAG00000007661 N 0.976
CELF5 Anolis carolinensis ENSACAG00000016959 I 0.700
CELF1 Anolis carolinensis ENSACAG00000002114 N 0.906
AGAP004950 Anopheles gambiae AGAP004950 I 0.721
amel4_ncbi_hmm7761 Apis mellifera amel4_ncbi_hmm7761 I 0.714
BGIBMGA010431 Bombyx mori BGIBMGA010431 I 0.729
A7MB95_BOVIN Bos taurus ENSBTAG00000002520 N 0.896
estExt_fgenesh2_pm.C_730008 Branchiostoma floridae estExt_fgenesh2_pm.C_730008 I 0.857
e_gw.91.28.1 Branchiostoma floridae e_gw.91.28.1 I 0.788
LOC100391960 Callithrix jacchus ENSCJAG00000020663 I 1.000
LOC100392717 Callithrix jacchus ENSCJAG00000020133 N 0.896
CELF1 Canis familiaris ENSCAFG00000008452 N 0.896
CELF2 Canis familiaris ENSCAFG00000004973 N 0.976
e_gw1.172.82.1 Capitella teleta e_gw1.172.82.1 I 0.705
CELF2 Cavia porcellus ENSCPOG00000012567 N 0.976
CELF1 Cavia porcellus ENSCPOG00000007871 N 0.896
CELF2 Choloepus hoffmanni ENSCHOG00000002945 N 0.920
CELF1 Choloepus hoffmanni ENSCHOG00000004196 N 0.761
ENSCING00000003762 Ciona intestinalis ENSCING00000003762 N 0.709
CpipJ_CPIJ016329 Culex pipiens CpipJ_CPIJ016329 I 0.743
CPIJ016329 Culex quinquefasciatus CPIJ016329 I 0.743
celf1 Danio rerio ENSDARG00000005315 N 0.877
celf2 Danio rerio ENSDARG00000002131 N 0.948
CELF1 Dasypus novemcinctus ENSDNOG00000009523 N 0.759
Celf1 Dipodomys ordii ENSDORG00000013721 N 0.882
Celf2 Dipodomys ordii ENSDORG00000006455 N 0.779
GF10965 Drosophila ananassae FBgn0088005 I 0.729
GG13757 Drosophila erecta FBgn0106020 I 0.729
GH14684 Drosophila grimshawi FBgn0122160 I 0.729
bru-3 Drosophila melanogaster FBgn0262350 D 0.729
FBgn0262475 Drosophila melanogaster FBgn0262475 I 0.721
GI13095 Drosophila mojavensis FBgn0135852 I 0.729
GL21647 Drosophila persimilis FBgn0159240 I 0.721
GA28624-RA Drosophila pseudoobscura FBgn0249984 I 0.736
GM24582 Drosophila sechellia FBgn0179445 I 0.729
GD12651 Drosophila simulans FBgn0184378 I 0.729
GJ13842 Drosophila virilis FBgn0201061 I 0.729
GK17101 Drosophila willistoni FBgn0219100 I 0.729
GE20053 Drosophila yakuba FBgn0237378 I 0.729
CELF2 Echinops telfairi ENSETEG00000008414 N 0.757
CELF2 Equus caballus ENSECAG00000006649 N 0.976
CELF1 Equus caballus ENSECAG00000007741 N 0.896
CELF2 Erinaceus europaeus ENSEEUG00000005658 N 0.976
CELF1 Erinaceus europaeus ENSEEUG00000009782 N 0.769
A5A2G2_CHICK Gallus gallus ENSGALG00000002413 I 0.721
CELF2_CHICK Gallus gallus ENSGALG00000006713 N 0.976
CELF1_CHICK Gallus gallus ENSGALG00000008097 N 0.906
A5A2G4_CHICK Gallus gallus ENSGALG00000001966 I 0.736
CELF6 Gasterosteus aculeatus ENSGACG00000016626 I 0.721
CELF2 Gasterosteus aculeatus ENSGACG00000004426 N 0.873
CELF5 Gasterosteus aculeatus ENSGACG00000012870 I 0.700
CELF1 Gasterosteus aculeatus ENSGACG00000014226 N 0.798
ENSGGOG00000023049 Gorilla gorilla ENSGGOG00000023049 I 0.700
CELF2 Gorilla gorilla ENSGGOG00000009330 I 1.000
CELF1 Gorilla gorilla ENSGGOG00000004106 N 0.723
90208 Helobdella robusta 90208 I 0.702
CELF1 Homo sapiens ENSG00000149187 N 0.896
CELF2 Homo sapiens ENSG00000048740 N 0.976
LOAG_05508 Loa loa LOAG_05508 I 0.721
CELF4 Loxodonta africana ENSLAFG00000021352 I 0.714
CELF2 Loxodonta africana ENSLAFG00000013612 N 0.976
CELF1 Loxodonta africana ENSLAFG00000003484 N 0.896
CELF1 Macaca mulatta ENSMMUG00000011657 N 0.896
CELF2 Macaca mulatta ENSMMUG00000011468 N 0.976
CELF1 Macropus eugenii ENSMEUG00000007763 N 0.906
CELF2 Macropus eugenii ENSMEUG00000015276 N 0.825
CELF1 Meleagris gallopavo ENSMGAG00000010629 N 0.906
CELF2 Meleagris gallopavo ENSMGAG00000004551 N 0.721
CELF1 Microcebus murinus ENSMICG00000007157 N 0.854
CELF2 Microcebus murinus ENSMICG00000007867 N 0.976
CELF6 Monodelphis domestica ENSMODG00000001784 I 0.707
CELF1 Monodelphis domestica ENSMODG00000019913 N 0.906
CELF2 Monodelphis domestica ENSMODG00000016763 N 0.801
Celf2 Mus musculus ENSMUSG00000002107 N 0.976
Celf1 Mus musculus ENSMUSG00000005506 N 0.887
CELF1 Myotis lucifugus ENSMLUG00000016631 N 0.751
nasonia_NCBI_hmm496514 Nasonia vitripennis nasonia_NCBI_hmm496514 I 0.721
CELF2 Ochotona princeps ENSOPRG00000011502 N 0.976
CELF1 Ochotona princeps ENSOPRG00000003239 N 0.882
CELF1 Ornithorhynchus anatinus ENSOANG00000007896 N 0.901
CELF6 Ornithorhynchus anatinus ENSOANG00000011308 I 0.729
CELF2 Ornithorhynchus anatinus ENSOANG00000015432 I 1.000
CELF1 Oryctolagus cuniculus ENSOCUG00000001311 N 0.896
CELF2 Oryctolagus cuniculus ENSOCUG00000004961 N 0.976
CELF6 Oryzias latipes ENSORLG00000013392 I 0.721
CELF2 Oryzias latipes ENSORLG00000017111 N 0.770
CELF2 Oryzias latipes ENSORLG00000003894 N 0.869
CELF1 Pan troglodytes ENSPTRG00000003568 N 0.769
CELF2 Pan troglodytes ENSPTRG00000002284 N 0.976
PHUM315130 Pediculus humanus PHUM315130 I 0.729
ENSPPYG00000003302 Pongo pygmaeus ENSPPYG00000003302 N 0.887
ENSPPYG00000002083 Pongo pygmaeus ENSPPYG00000002083 N 0.976
CELF2 Procavia capensis ENSPCAG00000010882 N 0.830
CELF1 Procavia capensis ENSPCAG00000002631 N 0.863
CELF1 Pteropus vampyrus ENSPVAG00000007340 N 0.744
Cugbp1 Rattus norvegicus ENSRNOG00000010379 N 0.887
Cugbp2 Rattus norvegicus ENSRNOG00000023661 N 0.976
Brunol4 Rattus norvegicus ENSRNOG00000014503 I 0.707
Smp_041280 Schistosoma mansoni Smp_041280 I 0.707
CELF1 Sorex araneus ENSSARG00000003207 N 0.769
CELF2 Sus scrofa ENSSSCG00000011121 N 0.700
BRUNOL4 Taeniopygia guttata ENSTGUG00000001649 I 0.721
CUGBP2-1 Taeniopygia guttata ENSTGUG00000002136 N 0.976
CUGBP1 Taeniopygia guttata ENSTGUG00000010377 N 0.906
CELF3 Takifugu rubripes ENSTRUG00000012064 I 0.700
CELF1 Takifugu rubripes ENSTRUG00000000617 N 0.704
CELF1 Takifugu rubripes ENSTRUG00000001711 N 0.887
CELF2 Takifugu rubripes ENSTRUG00000010147 N 0.948
CELF6 Takifugu rubripes ENSTRUG00000012391 I 0.714
CELF2 Takifugu rubripes ENSTRUG00000016905 N 0.869
CELF5 Takifugu rubripes ENSTRUG00000017937 I 0.707
CELF2 Tarsius syrichta ENSTSYG00000005118 N 0.801
CELF1 Tarsius syrichta ENSTSYG00000003866 N 0.744
CELF2 Tetraodon nigroviridis ENSTNIG00000007201 N 0.948
CELF5 Tetraodon nigroviridis ENSTNIG00000010634 I 0.707
CELF2 Tetraodon nigroviridis ENSTNIG00000016009 N 0.873
CELF1 Tupaia belangeri ENSTBEG00000005140 N 0.759
CELF2 Tupaia belangeri ENSTBEG00000007939 N 0.976
CELF1 Tursiops truncatus ENSTTRG00000014157 N 0.896
CELF2 Tursiops truncatus ENSTTRG00000014665 N 0.811
CELF2 Vicugna pacos ENSVPAG00000009360 N 0.801
CELF1 Vicugna pacos ENSVPAG00000000336 N 0.896
O57406 Xenopus laevis O57406 N 0.887
Q6PF35 Xenopus laevis Q6PF35 N 0.873
ACH69783 Xenopus laevis ACH69783 N 0.935
AAI08575 Xenopus laevis AAI08575 N 0.887
AAH70706 Xenopus laevis AAH70706 N 0.873
AAH57743 Xenopus laevis AAH57743 N 0.873
AAH45035 Xenopus laevis AAH45035 N 0.972
AAC41243 Xenopus laevis AAC41243 N 0.887
AAB09041 Xenopus laevis AAB09041 N 0.972
Q7ZXE2 Xenopus laevis Q7ZXE2 N 0.972
celf1 Xenopus tropicalis ENSXETG00000009044 N 0.887
celf2 Xenopus tropicalis ENSXETG00000021992 N 0.972