HNRNPM (Oryzias latipes)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSORLG00000005400 T40131_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSORLP00000006803 RRM 36 106
ENSORLP00000006803 RRM 130 199
ENSORLP00000006803 RRM 535 603

Links

Other RRM family RBPs
Other Oryzias latipes RBPs

70 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Ame_R005511 Ailuropoda melanoleuca Ame_R005511 N 0.733
Ame_R017061 Ailuropoda melanoleuca Ame_R017061 N 0.806
MYEF2 Anolis carolinensis ENSACAG00000004806 N 0.743
A6QQP0_BOVIN Bos taurus ENSBTAG00000008771 N 0.733
Q3SYX2_BOVIN Bos taurus ENSBTAG00000021039 N 0.806
MYEF2 Callithrix jacchus ENSCJAG00000001875 N 0.729
HNRNPM Callithrix jacchus ENSCJAG00000010802 N 0.810
MYEF2 Canis familiaris ENSCAFG00000014008 N 0.733
HNRNPM Canis familiaris ENSCAFG00000018524 N 0.806
HNRNPM Cavia porcellus ENSCPOG00000015182 N 0.806
HNRNPM Choloepus hoffmanni ENSCHOG00000013627 N 0.806
myef2 Danio rerio ENSDARG00000059398 N 0.719
HNRNPM Dasypus novemcinctus ENSDNOG00000012157 N 0.745
ENSDORG00000015835 Dipodomys ordii ENSDORG00000015835 N 0.729
HNRNPM Echinops telfairi ENSETEG00000019712 N 0.806
HNRNPM Equus caballus ENSECAG00000023868 N 0.806
LOC100070256 Equus caballus ENSECAG00000005741 N 0.733
HNRNPM Felis catus ENSFCAG00000015218 N 0.712
Q5ZHY2_CHICK Gallus gallus ENSGALG00000004905 N 0.733
Q5ZL80_CHICK Gallus gallus ENSGALG00000000377 N 0.807
MYEF2 Gasterosteus aculeatus ENSGACG00000016759 N 0.724
HNRNPM Gasterosteus aculeatus ENSGACG00000010265 N 0.938
HNRNPM Gorilla gorilla ENSGGOG00000003498 N 0.806
MYEF2 Gorilla gorilla ENSGGOG00000014968 N 0.729
HNRNPM Homo sapiens ENSG00000099783 N 0.806
MYEF2 Homo sapiens ENSG00000104177 N 0.733
HNRNPM Loxodonta africana ENSLAFG00000013603 N 0.806
MYEF2 Loxodonta africana ENSLAFG00000012990 N 0.738
HNRNPM Macaca mulatta ENSMMUG00000018806 N 0.806
MYEF2 Macaca mulatta ENSMMUG00000018834 N 0.733
HNRNPM Macropus eugenii ENSMEUG00000004789 N 0.745
MYEF2 Meleagris gallopavo ENSMGAG00000006915 N 0.733
HNRNPM Meleagris gallopavo ENSMGAG00000000700 N 0.797
HNRNPM Microcebus murinus ENSMICG00000002532 N 0.782
XM_001365870.1 Monodelphis domestica ENSMODG00000003801 N 0.806
Hnrnpm Mus musculus ENSMUSG00000059208 N 0.801
Myef2 Mus musculus ENSMUSG00000027201 N 0.724
HNRNPM Myotis lucifugus ENSMLUG00000006696 N 0.801
HNRNPM Ochotona princeps ENSOPRG00000001943 N 0.764
ENSOCUG00000000552 Oryctolagus cuniculus ENSOCUG00000000552 N 0.806
MYEF2 Oryctolagus cuniculus ENSOCUG00000013043 N 0.733
ENSOCUG00000024611 Oryctolagus cuniculus ENSOCUG00000024611 N 0.806
MYEF2 Oryzias latipes ENSORLG00000002730 N 0.738
HNRNPM Otolemur garnettii ENSOGAG00000003234 N 0.725
HNRNPM Pan troglodytes ENSPTRG00000010424 N 0.806
MYEF2 Pan troglodytes ENSPTRG00000007042 N 0.733
ENSPPYG00000009506 Pongo pygmaeus ENSPPYG00000009506 N 0.806
ENSPPYG00000006452 Pongo pygmaeus ENSPPYG00000006452 N 0.733
MYEF2 Procavia capensis ENSPCAG00000016660 N 0.733
HNRNPM Procavia capensis ENSPCAG00000009678 N 0.801
Myef2 Rattus norvegicus ENSRNOG00000005258 N 0.729
Hnrpm Rattus norvegicus ENSRNOG00000007921 N 0.806
ENSRNOG00000024645 Rattus norvegicus ENSRNOG00000024645 N 0.701
HNRNPM Sorex araneus ENSSARG00000000267 N 0.778
HNRNPM Spermophilus tridecemlineatus ENSSTOG00000008112 N 0.743
MYEF2 Sus scrofa ENSSSCG00000004661 N 0.724
HNRNPM Sus scrofa ENSSSCG00000013602 N 0.806
MYEF2 Taeniopygia guttata ENSTGUG00000007130 N 0.729
HNRNPM Takifugu rubripes ENSTRUG00000013783 N 0.919
MYEF2 Takifugu rubripes ENSTRUG00000016967 N 0.714
MYEF2 Tetraodon nigroviridis ENSTNIG00000009526 N 0.716
HNRNPM Tetraodon nigroviridis ENSTNIG00000015530 N 0.910
HNRNPM Tupaia belangeri ENSTBEG00000008718 N 0.791
HNRNPM Tursiops truncatus ENSTTRG00000009769 N 0.806
MYEF2 Tursiops truncatus ENSTTRG00000008076 N 0.733
MYEF2 Vicugna pacos ENSVPAG00000004721 N 0.733
AAI08588 Xenopus laevis AAI08588 N 0.743
AAI34826 Xenopus laevis AAI34826 N 0.768
hnrnpm Xenopus tropicalis ENSXETG00000001777 N 0.711
myef2 Xenopus tropicalis ENSXETG00000018412 N 0.757