MDP0000919119 (Malus x domestica)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 MDP0000919119 T57741_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
MDP0000919119 RRM 122 192
MDP0000919119 RRM 216 286

Links

Other RRM family RBPs
Other Malus x domestica RBPs

39 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
XM_002867599.1 Arabidopsis lyrata fgenesh2_kg.7__1798__AT4G24770.1 N 0.782
XM_002865734.1 Arabidopsis lyrata scaffold_801433.1 N 0.775
ATRBP31 Arabidopsis thaliana AT4G24770-TAIR-G N 0.746
CP31B Arabidopsis thaliana AT5G50250-TAIR-G N 0.746
BRADI4G38260 Brachypodium distachyon BRADI4G38260 N 0.810
PK05280.1 Cannabis sativa PK05280.1 N 0.859
PK28733.1 Cannabis sativa PK28733.1 N 0.739
Cucsa.196330 Cucumis sativus Cucsa.196330 N 0.796
Glyma04g36420.1 Glycine max Glyma04g36420.1 N 0.775
Glyma05g02800.1 Glycine max Glyma05g02800.1 N 0.754
Glyma06g18470.1 Glycine max Glyma06g18470.1 N 0.810
Glyma17g13470.1 Glycine max Glyma17g13470.1 N 0.761
MDP0000218595 Malus x domestica MDP0000218595 N 0.951
MDP0000224531 Malus x domestica MDP0000224531 N 0.000
MDP0000299693 Malus x domestica MDP0000299693 N 0.718
MDP0000528470 Malus x domestica MDP0000528470 N 0.901
cassava512.valid.m1 Manihot esculenta cassava512.valid.m1 N 0.796
cassava511.valid.m1 Manihot esculenta cassava511.valid.m1 N 0.831
cassava30233.valid.m1 Manihot esculenta cassava30233.valid.m1 N 0.810
mgf009747m Mimulus guttatus mgf009747m N 0.754
mgf008267m Mimulus guttatus mgf008267m N 0.796
mgf001484m Mimulus guttatus mgf001484m N 0.831
BGIOSIBCE028840 Oryza indica BGIOSIBCE028840 N 0.761
LOC_Os08g44290 Oryza sativa LOC_Os08g44290 N 0.761
LOC_Os09g39180 Oryza sativa LOC_Os09g39180 N 0.796
B9I3I8_POPTR Populus trichocarpa POPTR_0012s09200 N 0.803
B9IF14_POPTR Populus trichocarpa POPTR_0015s09810 N 0.754
A9PG08_POPTR Populus trichocarpa POPTR_0001s35830 N 0.810
ppa008913m Prunus persica ppa008913m N 0.923
ppa009286m Prunus persica ppa009286m N 0.796
30147.m013835 Ricinus communis 30147.m013835 N 0.803
SB02G011330 Sorghum bicolor Sb02g011330 N 0.796
GSVIVG00032361001 Vitis vinifera GSVIVG00032361001 N 0.852
GSVIVG00007596001 Vitis vinifera GSVIVG00007596001 N 0.796
GRMZM2G123234 Zea mays GRMZM2G123234 N 0.754
GRMZM2G011129 Zea mays GRMZM2G011129 N 0.824