Aqu1.215178 (Amphimedon queenslandica)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 Aqu1.215178 T20626_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
CG11360
M122_0.6
Drosophila melanogaster GAGUDW RNAcompete
Ray et al.(2013)
RNCMPT00129
0.793
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
Aqu1.215178 KH 501 561
Aqu1.215178 KH 612 670

Links

Other KH family RBPs
Other Amphimedon queenslandica RBPs

110 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity
Action
MEX3C Procavia capensis ENSPCAG00000009258 I 0.820
ENSCING00000002603 Ciona intestinalis ENSCING00000002603 I 0.820
gw.320.9.1 Nematostella vectensis gw.320.9.1 I 0.818
Mex3c Mus musculus ENSMUSG00000037253 I 0.811
ENSOCUG00000012549 Oryctolagus cuniculus ENSOCUG00000012549 I 0.811
MEX3C Gasterosteus aculeatus ENSGACG00000007490 I 0.811
MEX3C Oryzias latipes ENSORLG00000004985 I 0.811
MEX3C Monodelphis domestica ENSMODG00000011001 I 0.811
MEX3C Cavia porcellus ENSCPOG00000009646 I 0.811
LOC100410023 Callithrix jacchus ENSCJAG00000001902 I 0.811
ENSCPOG00000008241 Cavia porcellus ENSCPOG00000008241 I 0.811
MEX3C Choloepus hoffmanni ENSCHOG00000004915 I 0.811
MEX3C Loxodonta africana ENSLAFG00000027818 I 0.811
MEX3C Homo sapiens ENSG00000176624 I 0.811
MEX3C Macaca mulatta ENSMMUG00000023652 I 0.811
MEX3C Pan troglodytes ENSPTRG00000010029 I 0.811
estExt_Genewise1.C_sca_540218 Lottia gigantea estExt_Genewise1.C_sca_540218 I 0.811
MEX3C Gorilla gorilla ENSGGOG00000014875 I 0.811
MEX3C Equus caballus ENSECAG00000021727 I 0.811
Ame_R004658 Ailuropoda melanoleuca Ame_R004658 I 0.811
MEX3C Takifugu rubripes ENSTRUG00000011888 I 0.811
MEX3C Tursiops truncatus ENSTTRG00000004570 I 0.811
estExt_fgenesh2_pg.C_2010087 Branchiostoma floridae estExt_fgenesh2_pg.C_2010087 I 0.811
Mex3c Rattus norvegicus ENSRNOG00000015777 I 0.811
MEX3C Dasypus novemcinctus ENSDNOG00000006544 I 0.811
MEX3C Pteropus vampyrus ENSPVAG00000015135 I 0.811
GK13594 Drosophila willistoni FBgn0215602 I 0.810
XP_002168292.1 Hydra magnipapillata XP_002168292.1 I 0.810
GH23938 Drosophila grimshawi FBgn0131395 I 0.810
GJ18673 Drosophila virilis FBgn0205827 I 0.810
MEX3B Gorilla gorilla ENSGGOG00000000597 I 0.803
MEX3B Homo sapiens ENSG00000183496 I 0.803
MEX3B Ochotona princeps ENSOPRG00000009604 I 0.803
MEX3B Pan troglodytes ENSPTRG00000007373 I 0.803
MEX3B Pteropus vampyrus ENSPVAG00000000093 I 0.803
mex3c Xenopus tropicalis ENSXETG00000022367 I 0.803
ENSPPYG00000006723 Pongo pygmaeus ENSPPYG00000006723 I 0.803
MEX3B Equus caballus ENSECAG00000013497 I 0.803
MEX3B Macaca mulatta ENSMMUG00000018639 I 0.803
MEX3B Monodelphis domestica ENSMODG00000019387 I 0.803
e_gw1.15.409.1 Daphnia pulex e_gw1.15.409.1 I 0.803
MEX3B Loxodonta africana ENSLAFG00000006027 I 0.803
BAH79688 Xenopus laevis BAH79688 I 0.803
MEX3B Bos taurus ENSBTAG00000016630 I 0.803
AAI30070 Xenopus laevis AAI30070 I 0.803
AAI28670 Xenopus laevis AAI28670 I 0.803
Ame_R007174 Ailuropoda melanoleuca Ame_R007174 I 0.803
A1L3F4 Xenopus laevis A1L3F4 I 0.803
MEX3B Callithrix jacchus ENSCJAG00000008043 I 0.803
amel4_ncbi_hmm6985 Apis mellifera amel4_ncbi_hmm6985 I 0.803
MEX3B Danio rerio ENSDARG00000058369 I 0.803
XP_001175528.1 Strongylocentrotus purpuratus XP_001175528.1 I 0.795
MEX3B Tetraodon nigroviridis ENSTNIG00000003398 I 0.795
MEX3B Takifugu rubripes ENSTRUG00000000367 I 0.795
XP_786425.2 Strongylocentrotus purpuratus XP_786425.2 I 0.795
MEX3B Macropus eugenii ENSMEUG00000002402 I 0.795
nasonia_NCBI_hmm456104 Nasonia vitripennis nasonia_NCBI_hmm456104 I 0.795
GL18139 Drosophila persimilis FBgn0155742 I 0.793
GD24410 Drosophila simulans FBgn0195748 I 0.793
GM26809 Drosophila sechellia FBgn0181661 I 0.793
GA10947-RA Drosophila pseudoobscura FBgn0071003 I 0.793
CG11360 Drosophila melanogaster FBgn0039920 D 0.793
GG16398 Drosophila erecta FBgn0108630 I 0.793
GE14558 Drosophila yakuba FBgn0232157 I 0.793
MEX3B Gasterosteus aculeatus ENSGACG00000012530 I 0.787
MEX3C Canis familiaris ENSCAFG00000000162 I 0.787
AAI30196 Xenopus laevis AAI30196 I 0.785
GF20555 Drosophila ananassae FBgn0097561 I 0.785
MEX3D Macropus eugenii ENSMEUG00000016404 I 0.779
MEX3D Monodelphis domestica ENSMODG00000004116 I 0.779
MEX3D Taeniopygia guttata ENSTGUG00000000201 I 0.779
LOC100410413 Callithrix jacchus ENSCJAG00000007711 I 0.777
MEX3A Cavia porcellus ENSCPOG00000020219 I 0.777
ENSPPYG00000000729 Pongo pygmaeus ENSPPYG00000000729 I 0.777
MEX3A Gorilla gorilla ENSGGOG00000004513 I 0.777
MEX3A Ochotona princeps ENSOPRG00000002937 I 0.777
Mex3a Dipodomys ordii ENSDORG00000002921 I 0.777
Ame_R015561 Ailuropoda melanoleuca Ame_R015561 I 0.777
MEX3A Monodelphis domestica ENSMODG00000016954 I 0.777
MEX3A Oryctolagus cuniculus ENSOCUG00000005640 I 0.777
MEX3A Danio rerio ENSDARG00000076638 I 0.777
MEX3A Bos taurus ENSBTAG00000019158 I 0.777
MEX3A Macaca mulatta ENSMMUG00000022307 I 0.777
MEX3D Gorilla gorilla ENSGGOG00000001083 I 0.770
MEX3D Takifugu rubripes ENSTRUG00000007986 I 0.770
MEX3D Tetraodon nigroviridis ENSTNIG00000015325 I 0.770
MEX3D Homo sapiens ENSG00000181588 I 0.770
MEX3D Tursiops truncatus ENSTTRG00000008132 I 0.770
MEX3B Cavia porcellus ENSCPOG00000023663 I 0.770
Mex3d Mus musculus ENSMUSG00000048696 I 0.770
MEX3B Dasypus novemcinctus ENSDNOG00000012736 I 0.770
MEX3D Gasterosteus aculeatus ENSGACG00000015299 I 0.770
ENSPPYG00000009324 Pongo pygmaeus ENSPPYG00000009324 I 0.770
Mex3d Rattus norvegicus ENSRNOG00000030830 I 0.770
MEX3D Pan troglodytes ENSPTRG00000010208 I 0.770
mex-3 Caenorhabditis elegans F53G12.5 I 0.769
CRE03823 Caenorhabditis remanei CRE03823 I 0.769
CBN20397 Caenorhabditis brenneri CBN20397 I 0.769
CBN24563 Caenorhabditis brenneri CBN24563 I 0.769
AAI42552 Xenopus laevis AAI42552 I 0.762
CJA18034 Caenorhabditis japonica CJA18034 I 0.760
MEX3A Tursiops truncatus ENSTTRG00000013346 I 0.760
AAI33220 Xenopus laevis AAI33220 I 0.754
AAI30114 Xenopus laevis AAI30114 I 0.754
CBG05100 Caenorhabditis briggsae CBG05100 I 0.752
MEX3D Ornithorhynchus anatinus ENSOANG00000011764 I 0.746
MEX3A Pteropus vampyrus ENSPVAG00000010333 I 0.736
MEX3A Microcebus murinus ENSMICG00000002233 I 0.719
SNAPOd2T00016811001 Oikopleura dioica SNAPOd2T00016811001 I 0.702
ENSOCUG00000014295 Oryctolagus cuniculus ENSOCUG00000014295 I 0.702