ENSCHOG00000013886 (Choloepus hoffmanni)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSCHOG00000013886 T35347_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSCHOP00000012295 RRM 21 88

Links

Other RRM family RBPs
Other Choloepus hoffmanni RBPs

92 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
ENSSARG00000011902 Sorex araneus ENSSARG00000011902 N 0.882
ENSSSCG00000008587 Sus scrofa ENSSSCG00000008587 N 0.882
ENSTBEG00000012532 Tupaia belangeri ENSTBEG00000012532 N 0.882
ENSPVAG00000011346 Pteropus vampyrus ENSPVAG00000011346 N 0.882
XM_515324.2 Pan troglodytes ENSPTRG00000011709 N 0.882
ENSOCUG00000022008 Oryctolagus cuniculus ENSOCUG00000022008 N 0.882
ENSPPYG00000012603 Pongo pygmaeus ENSPPYG00000012603 N 0.882
SF3B14 Taeniopygia guttata ENSTGUG00000013191 N 0.882
ENSTSYG00000013978 Tarsius syrichta ENSTSYG00000013978 N 0.882
Q2KIQ7_BOVIN Bos taurus ENSBTAG00000003407 N 0.882
ENSACAG00000011677 Anolis carolinensis ENSACAG00000011677 N 0.882
XM_532889.2 Canis familiaris ENSCAFG00000003957 N 0.882
ENSCHOG00000000689 Choloepus hoffmanni ENSCHOG00000000689 N 0.882
ENSTTRG00000013430 Tursiops truncatus ENSTTRG00000013430 N 0.882
ENSVPAG00000005546 Vicugna pacos ENSVPAG00000005546 N 0.882
0610009D07Rik Mus musculus ENSMUSG00000037361 N 0.882
ENSOANG00000007627 Ornithorhynchus anatinus ENSOANG00000007627 N 0.882
ENSDNOG00000007148 Dasypus novemcinctus ENSDNOG00000007148 N 0.882
0610009D07Rik Dipodomys ordii ENSDORG00000009772 N 0.882
LOC100056247 Equus caballus ENSECAG00000015618 N 0.882
sf3b14 Danio rerio ENSDARG00000009753 N 0.882
Ame_R001592 Ailuropoda melanoleuca Ame_R001592 N 0.882
LOC100386467 Callithrix jacchus ENSCJAG00000007716 N 0.882
ENSCPOG00000008016 Cavia porcellus ENSCPOG00000008016 N 0.882
AC008073.5 Homo sapiens ENSG00000115128 N 0.882
ENSFCAG00000004304 Felis catus ENSFCAG00000004304 N 0.882
ENSMGAG00000014057 Meleagris gallopavo ENSMGAG00000014057 N 0.882
ENSMLUG00000002473 Myotis lucifugus ENSMLUG00000002473 N 0.882
XM_001098393.1 Macaca mulatta ENSMMUG00000001282 N 0.882
SF3B14 Gallus gallus ENSGALG00000016501 N 0.882
ENSLAFG00000029423 Loxodonta africana ENSLAFG00000029423 N 0.882
sf3b14 Xenopus tropicalis ENSXETG00000018204 N 0.868
amel4_ncbi_hmm5835 Apis mellifera amel4_ncbi_hmm5835 N 0.853
nasonia_NCBI_hmm648054 Nasonia vitripennis nasonia_NCBI_hmm648054 N 0.853
amel4_ncbi_hmm5835 Tribolium castaneum amel4_ncbi_hmm5835 N 0.853
DGIL_AUG5s10565g5t1 Acyrtosiphon pisum DGIL_AUG5s10565g5t1 N 0.853
nasonia_NCBI_hmm146063 Nasonia vitripennis nasonia_NCBI_hmm146063 N 0.853
AAH57709 Xenopus laevis AAH57709 N 0.853
ENSTRUG00000006551 Takifugu rubripes ENSTRUG00000006551 N 0.853
ENSORLG00000015955 Oryzias latipes ENSORLG00000015955 N 0.853
ENSTNIG00000009719 Tetraodon nigroviridis ENSTNIG00000009719 N 0.853
XM_001364269.1 Monodelphis domestica ENSMODG00000002144 N 0.853
ENSGACG00000004803 Gasterosteus aculeatus ENSGACG00000004803 N 0.838
estExt_GenewiseH_1.C_6800062 Branchiostoma floridae estExt_GenewiseH_1.C_6800062 N 0.838
CpipJ_CPIJ008576 Culex pipiens CpipJ_CPIJ008576 N 0.824
ISCW024082 Ixodes scapularis ISCW024082 N 0.824
PHUM617060 Pediculus humanus PHUM617060 N 0.824
AAEL005909 Aedes aegypti AAEL005909 N 0.824
estExt_fgenesh2_kg.C_sca_670005 Lottia gigantea estExt_fgenesh2_kg.C_sca_670005 N 0.824
CPIJ008576 Culex quinquefasciatus CPIJ008576 N 0.824
AGAP002780 Anopheles gambiae AGAP002780 N 0.809
estExt_fgenesh1_pg.C_1580052 Nematostella vectensis estExt_fgenesh1_pg.C_1580052 N 0.809
estExt_fgenesh1_kg.C_20004 Daphnia pulex estExt_fgenesh1_kg.C_20004 N 0.797
ENSCSAVG00000008970 Ciona savignyi ENSCSAVG00000008970 N 0.794
68671 Helobdella robusta 68671 N 0.794
Minc01156 Meloidogyne incognita Minc01156 N 0.794
ENSCING00000012689 Ciona intestinalis ENSCING00000012689 N 0.794
estExt_fgenesh1_pg.C_2760028 Capitella teleta estExt_fgenesh1_pg.C_2760028 N 0.779
XP_002160322.1 Hydra magnipapillata XP_002160322.1 N 0.779
GK17258 Drosophila willistoni FBgn0219257 N 0.768
GH16287 Drosophila grimshawi FBgn0123758 N 0.768
GI13232 Drosophila mojavensis FBgn0135989 N 0.768
GL22529 Drosophila persimilis FBgn0160121 N 0.768
GM13852 Drosophila sechellia FBgn0168783 N 0.768
GG14070 Drosophila erecta FBgn0106332 N 0.768
GF10910 Drosophila ananassae FBgn0087950 N 0.768
CG13298 Drosophila melanogaster FBgn0035692 N 0.768
GE20495 Drosophila yakuba FBgn0068445 N 0.768
GA12181-RA Drosophila pseudoobscura FBgn0072229 N 0.768
GJ12004 Drosophila virilis FBgn0199256 N 0.768
GD13137 Drosophila simulans FBgn0184859 N 0.768
Smp_032060 Schistosoma mansoni Smp_032060 N 0.765
PPA24922 Pristionchus pacificus PPA24922 N 0.765
Sjc_0071370 Schistosoma japonicum Sjc_0071370 N 0.765
LOAG_04189 Loa loa LOAG_04189 N 0.754
C50D2.5 Caenorhabditis elegans C50D2.5 N 0.750
CBG06987 Caenorhabditis briggsae CBG06987 N 0.750
CBN08400 Caenorhabditis brenneri CBN08400 N 0.750
CRE22109 Caenorhabditis remanei CRE22109 N 0.750
CJA01433 Caenorhabditis japonica CJA01433 N 0.750
e_gw1.17.197.1 Volvox carteri e_gw1.17.197.1 N 0.735
Aqu1.214150 Amphimedon queenslandica Aqu1.214150 N 0.721
SB01G003790 Sorghum bicolor Sb01g003790 N 0.721
estExt_fgenesh2_pg.C_240194 Selaginella moellendorfii estExt_fgenesh2_pg.C_240194 N 0.721
GRMZM2G358416 Zea mays GRMZM2G358416 N 0.721
GRMZM2G107745 Zea mays GRMZM2G107745 N 0.721
e_gw1.13.49.1 Emiliania huxleyi e_gw1.13.49.1 N 0.710
fgeneshTA2_pm.C_scaffold_21000029 Trichoplax adhaerens fgeneshTA2_pm.C_scaffold_21000029 N 0.710
BRADI1G04240 Brachypodium distachyon BRADI1G04240 N 0.706
LOC_Os03g59710 Oryza sativa LOC_Os03g59710 N 0.706
SNAPOd2T00023714001 Oikopleura dioica SNAPOd2T00023714001 N 0.706
BGIOSIBCE013412 Oryza indica BGIOSIBCE013412 N 0.706