e_gw1.24.298.1 (Selaginella moellendorfii)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 e_gw1.24.298.1 T49886_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
e_gw1.24.298.1 RRM 8 76
e_gw1.24.298.1 RRM 111 180

Links

Other RRM family RBPs
Other Selaginella moellendorfii RBPs

34 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
gw1.3.93.1 Selaginella moellendorfii gw1.3.93.1 N 0.734
Medtr2g030270 Medicago truncatula Medtr2g030270 N 0.727
B9GTG8_POPTR Populus trichocarpa POPTR_0002s22120 N 0.727
Medtr5g105300 Medicago truncatula Medtr5g105300 N 0.727
mgf009385m Mimulus guttatus mgf009385m N 0.727
chr6.LjT16B20.40.nc Lotus japonicus chr6.LjT16B20.40.nc N 0.727
estExt_Genewise1Plus.C_180065 Selaginella moellendorfii estExt_Genewise1Plus.C_180065 N 0.727
Cucsa.180480 Cucumis sativus Cucsa.180480 N 0.727
cassava12077.valid.m1 Manihot esculenta cassava12077.valid.m1 N 0.719
cassava12078.valid.m1 Manihot esculenta cassava12078.valid.m1 N 0.719
ppa005119m Prunus persica ppa005119m N 0.719
30048.m000319 Ricinus communis 30048.m000319 N 0.719
ppa005132m Prunus persica ppa005132m N 0.719
MDP0000642684 Malus x domestica MDP0000642684 N 0.712
29608.m000212 Ricinus communis 29608.m000212 N 0.712
Glyma14g00970.1 Glycine max Glyma14g00970.1 N 0.712
cassava23136.valid.m1 Manihot esculenta cassava23136.valid.m1 N 0.712
MDP0000320618 Malus x domestica MDP0000320618 N 0.712
Glyma02g47690.1 Glycine max Glyma02g47690.1 N 0.712
mgf009486m Mimulus guttatus mgf009486m N 0.707
LOC_Os11g41890 Oryza sativa LOC_Os11g41890 N 0.707
GRMZM2G014400 Zea mays GRMZM2G014400 N 0.705
Cucsa.042370 Cucumis sativus Cucsa.042370 N 0.705
SB02G037690 Sorghum bicolor Sb02g037690 N 0.705
cassava865.valid.m1 Manihot esculenta cassava865.valid.m1 N 0.705
SB02G005620 Sorghum bicolor Sb02g005620 N 0.705
BRADI1G23280 Brachypodium distachyon BRADI1G23280 N 0.705
GRMZM2G162954 Zea mays GRMZM2G162954 N 0.705
MDP0000907782 Malus x domestica MDP0000907782 N 0.705
GSVIVG00037771001 Vitis vinifera GSVIVG00037771001 N 0.705
GRMZM2G022313 Zea mays GRMZM2G022313 N 0.705
SB02G005670 Sorghum bicolor Sb02g005670 N 0.705
B9HCV4_POPTR Populus trichocarpa POPTR_0006s01680 N 0.705
B9IAN1_POPTR Populus trichocarpa POPTR_0014s15970 N 0.702