GRMZM2G162954 (Zea mays)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 GRMZM2G162954 T54170_0.6 MaizeSequence (2009-Oct-16)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
GRMZM2G162954_P01 RRM 10 78
GRMZM2G162954_P01 RRM 110 179

Links

Other RRM family RBPs
Other Zea mays RBPs

73 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
GRMZM2G144890 Zea mays GRMZM2G144890 N 0.971
SB02G005670 Sorghum bicolor Sb02g005670 N 0.950
SB02G005620 Sorghum bicolor Sb02g005620 N 0.950
GRMZM2G013065 Zea mays GRMZM2G013065 N 0.942
BGIOSIBCE025402 Oryza indica BGIOSIBCE025402 N 0.928
SB02G037690 Sorghum bicolor Sb02g037690 N 0.921
LOC_Os07g39560 Oryza sativa LOC_Os07g39560 N 0.921
GRMZM2G014400 Zea mays GRMZM2G014400 N 0.921
GRMZM2G022313 Zea mays GRMZM2G022313 N 0.914
BRADI1G23280 Brachypodium distachyon BRADI1G23280 N 0.899
LOC_Os11g41890 Oryza sativa LOC_Os11g41890 N 0.857
BRADI4G12200 Brachypodium distachyon BRADI4G12200 N 0.843
29608.m000212 Ricinus communis 29608.m000212 N 0.835
30048.m000319 Ricinus communis 30048.m000319 N 0.827
B9HCV4_POPTR Populus trichocarpa POPTR_0006s01680 N 0.827
cassava865.valid.m1 Manihot esculenta cassava865.valid.m1 N 0.820
27613.m000635 Ricinus communis 27613.m000635 N 0.820
cassava12078.valid.m1 Manihot esculenta cassava12078.valid.m1 N 0.820
cassava12077.valid.m1 Manihot esculenta cassava12077.valid.m1 N 0.820
Cucsa.042370 Cucumis sativus Cucsa.042370 N 0.813
cassava31392.valid.m1 Manihot esculenta cassava31392.valid.m1 N 0.813
PK25912.1 Cannabis sativa PK25912.1 N 0.813
PK13457.1 Cannabis sativa PK13457.1 N 0.813
GSVIVG00037771001 Vitis vinifera GSVIVG00037771001 N 0.806
Medtr2g030270 Medicago truncatula Medtr2g030270 N 0.806
B9I165_POPTR Populus trichocarpa POPTR_0011s09050 N 0.806
ppa005132m Prunus persica ppa005132m N 0.806
mgf009385m Mimulus guttatus mgf009385m N 0.806
B9GJW8_POPTR Populus trichocarpa POPTR_0001s37230 N 0.806
cassava23136.valid.m1 Manihot esculenta cassava23136.valid.m1 N 0.806
ppa005119m Prunus persica ppa005119m N 0.806
mgf012147m Mimulus guttatus mgf012147m N 0.799
POPTR_0016s01150 Populus trichocarpa POPTR_0016s01150 N 0.799
Glyma18g09090.1 Glycine max Glyma18g09090.1 N 0.799
Glyma02g47690.1 Glycine max Glyma02g47690.1 N 0.799
B9GTG8_POPTR Populus trichocarpa POPTR_0002s22120 N 0.799
ppa004834m Prunus persica ppa004834m N 0.799
MDP0000320618 Malus x domestica MDP0000320618 N 0.799
GSVIVG00030040001 Vitis vinifera GSVIVG00030040001 N 0.799
Medtr3g076980 Medicago truncatula Medtr3g076980 N 0.799
ppa005122m Prunus persica ppa005122m N 0.799
MDP0000204698 Malus x domestica MDP0000204698 N 0.799
chr2.LjT48A12.20.nd Lotus japonicus chr2.LjT48A12.20.nd N 0.793
MDP0000609551 Malus x domestica MDP0000609551 N 0.791
Glyma14g00970.1 Glycine max Glyma14g00970.1 N 0.791
mgf004139m Mimulus guttatus mgf004139m N 0.791
Glyma02g46650.1 Glycine max Glyma02g46650.1 N 0.791
Glyma08g43740.1 Glycine max Glyma08g43740.1 N 0.791
MDP0000188788 Malus x domestica MDP0000188788 N 0.791
MDP0000907782 Malus x domestica MDP0000907782 N 0.791
MDP0000642684 Malus x domestica MDP0000642684 N 0.791
AT3G07810 Arabidopsis thaliana AT3G07810-TAIR-G N 0.791
XM_002882506.1 Arabidopsis lyrata fgenesh2_kg.3__820__AT3G07810.2 N 0.791
XM_002863283.1 Arabidopsis lyrata Al_scaffold_0008_26 N 0.791
cassava10847.m1 Manihot esculenta cassava10847.m1 N 0.791
Medtr5g105300 Medicago truncatula Medtr5g105300 N 0.784
Glyma14g02020.1 Glycine max Glyma14g02020.1 N 0.784
B9IAN1_POPTR Populus trichocarpa POPTR_0014s15970 N 0.780
chr2.LjT48A12.190.nd Lotus japonicus chr2.LjT48A12.190.nd N 0.777
chr6.LjT16B20.40.nc Lotus japonicus chr6.LjT16B20.40.nc N 0.777
chr6.LjT11E14.110.nc Lotus japonicus chr6.LjT11E14.110.nc N 0.777
Cucsa.180480 Cucumis sativus Cucsa.180480 N 0.777
Cucsa.120420 Cucumis sativus Cucsa.120420 N 0.777
AT5G47620 Arabidopsis thaliana AT5G47620-TAIR-G N 0.777
AT4G26650 Arabidopsis thaliana AT4G26650-TAIR-G N 0.770
XM_002869554.1 Arabidopsis lyrata fgenesh2_kg.7__1574__AT4G26650.1 N 0.770
XM_002862650.1 Arabidopsis lyrata fgenesh2_kg.8__1457__AT5G55550.1 N 0.763
mgf009486m Mimulus guttatus mgf009486m N 0.757
AT5G55550 Arabidopsis thaliana AT5G55550-TAIR-G N 0.755
gw1.3.93.1 Selaginella moellendorfii gw1.3.93.1 N 0.734
Medtr4g155980 Medicago truncatula Medtr4g155980 N 0.719
e_gw1.24.298.1 Selaginella moellendorfii e_gw1.24.298.1 N 0.705
SB05G025410 Sorghum bicolor Sb05g025410 N 0.705