mgf004596m (Mimulus guttatus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 mgf004596m T53615_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
mgf004596m RRM 29 99
mgf004596m RRM 117 186
mgf004596m RRM 208 277
mgf004596m RRM 311 380

Links

Other RRM family RBPs
Other Mimulus guttatus RBPs

34 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
A9PEX9_POPTR Populus trichocarpa POPTR_0001s31160 N 0.794
Glyma02g11580.1 Glycine max Glyma02g11580.1 N 0.790
mgf005294m Mimulus guttatus mgf005294m N 0.790
cassava6947.valid.m1 Manihot esculenta cassava6947.valid.m1 N 0.786
29801.m003152 Ricinus communis 29801.m003152 N 0.779
Glyma07g33860.1 Glycine max Glyma07g33860.1 N 0.779
ppa002607m Prunus persica ppa002607m N 0.776
B9HS30_POPTR Populus trichocarpa POPTR_0009s10220 N 0.776
MDP0000156895 Malus x domestica MDP0000156895 N 0.772
MDP0000253709 Malus x domestica MDP0000253709 N 0.772
MDP0000497543 Malus x domestica MDP0000497543 N 0.769
Cucsa.244510 Cucumis sativus Cucsa.244510 N 0.765
30170.m013847 Ricinus communis 30170.m013847 N 0.765
Medtr4g130250 Medicago truncatula Medtr4g130250 N 0.765
GSVIVG00009455001 Vitis vinifera GSVIVG00009455001 N 0.762
cassava12359.valid.m1 Manihot esculenta cassava12359.valid.m1 N 0.758
Cucsa.219740 Cucumis sativus Cucsa.219740 N 0.751
B9GNU4_POPTR Populus trichocarpa POPTR_0014s02550 N 0.744
cassava17495.valid.m1 Manihot esculenta cassava17495.valid.m1 N 0.744
PK02172.1 Cannabis sativa PK02172.1 N 0.744
GSVIVG00022079001 Vitis vinifera GSVIVG00022079001 N 0.744
POPTR_0002s12570 Populus trichocarpa POPTR_0002s12570 N 0.737
mgf009542m Mimulus guttatus mgf009542m N 0.737
mgf004973m Mimulus guttatus mgf004973m N 0.726
Medtr1g024150 Medicago truncatula Medtr1g024150 N 0.722
Glyma14g09300.1 Glycine max Glyma14g09300.1 N 0.719
ppa002618m Prunus persica ppa002618m N 0.719
XM_002869128.1 Arabidopsis lyrata Al_scaffold_0007_654 N 0.719
ppa002620m Prunus persica ppa002620m N 0.719
Glyma17g35890.1 Glycine max Glyma17g35890.1 N 0.715
MDP0000283985 Malus x domestica MDP0000283985 N 0.715
Medtr3g147440 Medicago truncatula Medtr3g147440 N 0.708
XM_002883853.1 Arabidopsis lyrata scaffold_303734.1 N 0.705
PAB2 Arabidopsis thaliana AT4G34110-TAIR-G N 0.705