Glyma15g14490.1 (Glycine max)
YTH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF04146 (YTH) IPR007275 Glyma15g14490.1 T62404_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
Glyma15g14490.1 YTH 378 468

Links

Other YTH family RBPs
Other Glycine max RBPs

150 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Glyma09g03590.1 Glycine max Glyma09g03590.1 N 0.923
Medtr2g036990 Medicago truncatula Medtr2g036990 N 0.912
Glyma17g04270.1 Glycine max Glyma17g04270.1 N 0.912
Medtr8g134440 Medicago truncatula Medtr8g134440 N 0.901
chr6.LjT36O06.80.nd Lotus japonicus chr6.LjT36O06.80.nd N 0.901
ppa018635m Prunus persica ppa018635m N 0.890
Glyma07g36110.1 Glycine max Glyma07g36110.1 N 0.890
cassava42992.valid.m1 Manihot esculenta cassava42992.valid.m1 N 0.879
cassava42993.valid.m1 Manihot esculenta cassava42993.valid.m1 N 0.879
GSVIVG00017649001 Vitis vinifera GSVIVG00017649001 N 0.879
29889.m003364 Ricinus communis 29889.m003364 N 0.857
Cucsa.135220 Cucumis sativus Cucsa.135220 N 0.857
B9HII9_POPTR Populus trichocarpa POPTR_0008s09960 N 0.857
MDP0000132385 Malus x domestica MDP0000132385 N 0.857
MDP0000306387 Malus x domestica MDP0000306387 N 0.857
mgf017987m Mimulus guttatus mgf017987m N 0.846
mgf014143m Mimulus guttatus mgf014143m N 0.846
mgf015583m Mimulus guttatus mgf015583m N 0.846
B9HX84_POPTR Populus trichocarpa POPTR_0010s16210 N 0.835
MDP0000231231 Malus x domestica MDP0000231231 N 0.824
ppa003664m Prunus persica ppa003664m N 0.824
MDP0000286471 Malus x domestica MDP0000286471 N 0.824
PDK_20s1352821g002 Phoenix dactylifera PDK_20s1352821g002 N 0.824
BRADI2G46590 Brachypodium distachyon BRADI2G46590 N 0.824
MDP0000171737 Malus x domestica MDP0000171737 N 0.813
BGIOSIBCE003171 Oryza indica BGIOSIBCE003171 N 0.813
LOC_Os01g48790 Oryza sativa LOC_Os01g48790 N 0.813
XM_002894050.1 Arabidopsis lyrata fgenesh2_kg.1__3903__AT1G48110.2 N 0.813
ECT7 Arabidopsis thaliana AT1G48110-TAIR-G N 0.813
PK02315.1 Cannabis sativa PK02315.1 N 0.813
BGIOSIBCE010884 Oryza indica BGIOSIBCE010884 N 0.802
ECT5 Arabidopsis thaliana AT3G13060-TAIR-G N 0.802
cassava17772.valid.m1 Manihot esculenta cassava17772.valid.m1 N 0.802
GRMZM2G127780 Zea mays GRMZM2G127780 N 0.802
XM_002882758.1 Arabidopsis lyrata fgenesh2_kg.3__1376__AT3G13060.2 N 0.802
LOC_Os03g20180 Oryza sativa LOC_Os03g20180 N 0.802
SB03G031190 Sorghum bicolor Sb03g031190 N 0.802
B9HI18_POPTR Populus trichocarpa POPTR_0008s08030 N 0.802
B9GMK5_POPTR Populus trichocarpa POPTR_0001s13870 N 0.802
GRMZM2G169116 Zea mays GRMZM2G169116 N 0.802
cassava17771.valid.m1 Manihot esculenta cassava17771.valid.m1 N 0.802
29955.m001158 Ricinus communis 29955.m001158 N 0.791
BRADI1G64100 Brachypodium distachyon BRADI1G64100 N 0.791
GSVIVG00036696001 Vitis vinifera GSVIVG00036696001 N 0.791
SB07G024500 Sorghum bicolor Sb07g024500 N 0.791
cassava6538.valid.m1 Manihot esculenta cassava6538.valid.m1 N 0.791
XM_002885156.1 Arabidopsis lyrata Al_scaffold_0003_1823 N 0.791
cassava12061.valid.m1 Manihot esculenta cassava12061.valid.m1 N 0.780
Medtr2g085380 Medicago truncatula Medtr2g085380 N 0.780
LOC_Os04g51940 Oryza sativa LOC_Os04g51940 N 0.780
ECT6 Arabidopsis thaliana AT3G17330-TAIR-G N 0.780
GRMZM2G025488 Zea mays GRMZM2G025488 N 0.780
B9HYD4_POPTR Populus trichocarpa POPTR_0010s18300 N 0.780
B9N5D4_POPTR Populus trichocarpa POPTR_0014s00320 N 0.780
29929.m004643 Ricinus communis 29929.m004643 N 0.780
XM_002887730.1 Arabidopsis lyrata fgenesh2_kg.2__2224__AT1G79270.1 N 0.769
BRADI3G42640 Brachypodium distachyon BRADI3G42640 N 0.769
Glyma08g17240.1 Glycine max Glyma08g17240.1 N 0.769
Medtr4g163280 Medicago truncatula Medtr4g163280 N 0.769
ECT8 Arabidopsis thaliana AT1G79270-TAIR-G N 0.769
mgf019821m Mimulus guttatus mgf019821m N 0.769
Glyma15g41960.1 Glycine max Glyma15g41960.1 N 0.769
BGIOSIBCE026930 Oryza indica BGIOSIBCE026930 N 0.769
29890.m000285 Ricinus communis 29890.m000285 N 0.769
BGIOSIBCE028829 Oryza indica BGIOSIBCE028829 N 0.769
GSVIVG00029460001 Vitis vinifera GSVIVG00029460001 N 0.769
PK23104.1 Cannabis sativa PK23104.1 N 0.769
ppa002483m Prunus persica ppa002483m N 0.769
ppa002588m Prunus persica ppa002588m N 0.769
LOC_Os08g12760 Oryza sativa LOC_Os08g12760 N 0.769
LOC_Os08g44200 Oryza sativa LOC_Os08g44200 N 0.769
B9HG69_POPTR Populus trichocarpa POPTR_0007s15150 N 0.769
Glyma08g24210.1 Glycine max Glyma08g24210.1 N 0.769
PDK_20s1631851g001 Phoenix dactylifera PDK_20s1631851g001 N 0.769
PK17832.1 Cannabis sativa PK17832.1 N 0.769
Glyma07g00280.1 Glycine max Glyma07g00280.1 N 0.769
chr3.CM0292.380.nc Lotus japonicus chr3.CM0292.380.nc N 0.769
Cucsa.356240 Cucumis sativus Cucsa.356240 N 0.769
mgf001716m Mimulus guttatus mgf001716m N 0.758
mgf014829m Mimulus guttatus mgf014829m N 0.758
LjSGA_032005.1 Lotus japonicus LjSGA_032005.1 N 0.758
MDP0000405927 Malus x domestica MDP0000405927 N 0.758
MDP0000287088 Malus x domestica MDP0000287088 N 0.758
cassava1916.valid.m1 Manihot esculenta cassava1916.valid.m1 N 0.758
cassava1918.valid.m1 Manihot esculenta cassava1918.valid.m1 N 0.758
cassava1917.valid.m1 Manihot esculenta cassava1917.valid.m1 N 0.758
MDP0000617859 Malus x domestica MDP0000617859 N 0.758
BGIOSIBCE016517 Oryza indica BGIOSIBCE016517 N 0.747
gw1.181.55.1 Physcomitrella patens gw1.181.55.1 N 0.747
GSVIVG00010494001 Vitis vinifera GSVIVG00010494001 N 0.747
GRMZM2G442195 Zea mays GRMZM2G442195 N 0.747
MDP0000552419 Malus x domestica MDP0000552419 N 0.747
SB07G006330 Sorghum bicolor Sb07g006330 N 0.747
MDP0000248088 Malus x domestica MDP0000248088 N 0.747
PK05579.1 Cannabis sativa PK05579.1 N 0.747
Sb01g046550 Sorghum bicolor Sb01g046550 N 0.736
BRADI3G18190 Brachypodium distachyon BRADI3G18190 N 0.736
B9N817_POPTR Populus trichocarpa POPTR_0018s14670 N 0.736
GRMZM2G330019 Zea mays GRMZM2G330019 N 0.736
mgf019846m Mimulus guttatus mgf019846m N 0.736
GSVIVG00032236001 Vitis vinifera GSVIVG00032236001 N 0.736
GRMZM2G076062 Zea mays GRMZM2G076062 N 0.736
LjSGA_011466.1 Lotus japonicus LjSGA_011466.1 N 0.736
PK01736.1 Cannabis sativa PK01736.1 N 0.736
LjT10H22.120.nd Lotus japonicus LjT10H22.120.nd N 0.725
SB02G003990 Sorghum bicolor Sb02g003990 N 0.725
A9PED2_POPTR Populus trichocarpa POPTR_0019s04990 N 0.725
BRADI2G12380 Brachypodium distachyon BRADI2G12380 N 0.725
PDK_20s1906441g001 Phoenix dactylifera PDK_20s1906441g001 N 0.725
ppa002677m Prunus persica ppa002677m N 0.725
cassava22612.valid.m1 Manihot esculenta cassava22612.valid.m1 N 0.725
MDP0000488588 Malus x domestica MDP0000488588 N 0.725
GRMZM2G144726 Zea mays GRMZM2G144726 N 0.725
B9HBC4_POPTR Populus trichocarpa POPTR_0006s07970 N 0.725
MDP0000199885 Malus x domestica MDP0000199885 N 0.725
29950.m001140 Ricinus communis 29950.m001140 N 0.725
29765.m000746 Ricinus communis 29765.m000746 N 0.714
cassava13322.valid.m1 Manihot esculenta cassava13322.valid.m1 N 0.714
cassava13323.valid.m1 Manihot esculenta cassava13323.valid.m1 N 0.714
cassava13324.valid.m1 Manihot esculenta cassava13324.valid.m1 N 0.714
cassava14932.m1 Manihot esculenta cassava14932.m1 N 0.714
BGIOSIBCE017245 Oryza indica BGIOSIBCE017245 N 0.714
Medtr4g136900 Medicago truncatula Medtr4g136900 N 0.714
BGIOSIBCE023845 Oryza indica BGIOSIBCE023845 N 0.714
SB06G027960 Sorghum bicolor Sb06g027960 N 0.714
MDP0000124048 Malus x domestica MDP0000124048 N 0.714
MDP0000256033 Malus x domestica MDP0000256033 N 0.714
MDP0000488248 Malus x domestica MDP0000488248 N 0.714
GSVIVG00033395001 Vitis vinifera GSVIVG00033395001 N 0.714
LOC_Os07g07490 Oryza sativa LOC_Os07g07490 N 0.714
gw1.198.66.1 Physcomitrella patens gw1.198.66.1 N 0.714
gw1.1.157.1 Selaginella moellendorfii gw1.1.157.1 N 0.714
LOC_Os05g01520 Oryza sativa LOC_Os05g01520 N 0.714
mgf009938m Mimulus guttatus mgf009938m N 0.703
mgf013935m Mimulus guttatus mgf013935m N 0.703
GRMZM2G126338 Zea mays GRMZM2G126338 N 0.703
Cucsa.142200 Cucumis sativus Cucsa.142200 N 0.703
mgf013853m Mimulus guttatus mgf013853m N 0.703
PK26094.1 Cannabis sativa PK26094.1 N 0.703
LOC_Os01g22630 Oryza sativa LOC_Os01g22630 N 0.703
LOC_Os03g53670 Oryza sativa LOC_Os03g53670 N 0.703
SB01G005500 Sorghum bicolor Sb01g005500 N 0.703
SB01G008170 Sorghum bicolor Sb01g008170 N 0.703
GSVIVG00025494001 Vitis vinifera GSVIVG00025494001 N 0.703
GSVIVG00023248001 Vitis vinifera GSVIVG00023248001 N 0.703
PDK_20s1308332g001 Phoenix dactylifera PDK_20s1308332g001 N 0.703
ppa003557m Prunus persica ppa003557m N 0.703
ECT1 Arabidopsis thaliana AT3G03950-TAIR-G N 0.703
BRADI1G74560 Brachypodium distachyon BRADI1G74560 N 0.703
MDP0000718677 Malus x domestica MDP0000718677 N 0.703