mgf015583m (Mimulus guttatus)
YTH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF04146 (YTH) IPR007275 mgf015583m T62428_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
mgf015583m YTH 391 481

Links

Other YTH family RBPs
Other Mimulus guttatus RBPs

136 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
mgf014143m Mimulus guttatus mgf014143m N 1.000
mgf017987m Mimulus guttatus mgf017987m N 0.989
GSVIVG00017649001 Vitis vinifera GSVIVG00017649001 N 0.890
cassava42992.valid.m1 Manihot esculenta cassava42992.valid.m1 N 0.890
cassava42993.valid.m1 Manihot esculenta cassava42993.valid.m1 N 0.890
chr6.LjT36O06.80.nd Lotus japonicus chr6.LjT36O06.80.nd N 0.890
Glyma17g04270.1 Glycine max Glyma17g04270.1 N 0.890
ppa018635m Prunus persica ppa018635m N 0.879
B9HX84_POPTR Populus trichocarpa POPTR_0010s16210 N 0.879
B9HII9_POPTR Populus trichocarpa POPTR_0008s09960 N 0.879
Glyma07g36110.1 Glycine max Glyma07g36110.1 N 0.868
Medtr2g036990 Medicago truncatula Medtr2g036990 N 0.868
Medtr8g134440 Medicago truncatula Medtr8g134440 N 0.868
Cucsa.135220 Cucumis sativus Cucsa.135220 N 0.868
29889.m003364 Ricinus communis 29889.m003364 N 0.868
Glyma15g14490.1 Glycine max Glyma15g14490.1 N 0.846
PK02315.1 Cannabis sativa PK02315.1 N 0.846
PDK_20s1352821g002 Phoenix dactylifera PDK_20s1352821g002 N 0.846
MDP0000306387 Malus x domestica MDP0000306387 N 0.846
MDP0000132385 Malus x domestica MDP0000132385 N 0.846
Glyma09g03590.1 Glycine max Glyma09g03590.1 N 0.835
BRADI1G64100 Brachypodium distachyon BRADI1G64100 N 0.835
ECT6 Arabidopsis thaliana AT3G17330-TAIR-G N 0.835
ECT7 Arabidopsis thaliana AT1G48110-TAIR-G N 0.835
XM_002885156.1 Arabidopsis lyrata Al_scaffold_0003_1823 N 0.835
XM_002894050.1 Arabidopsis lyrata fgenesh2_kg.1__3903__AT1G48110.2 N 0.835
BGIOSIBCE010884 Oryza indica BGIOSIBCE010884 N 0.824
LOC_Os03g20180 Oryza sativa LOC_Os03g20180 N 0.824
LOC_Os01g48790 Oryza sativa LOC_Os01g48790 N 0.791
BRADI2G46590 Brachypodium distachyon BRADI2G46590 N 0.791
BGIOSIBCE003171 Oryza indica BGIOSIBCE003171 N 0.791
PK23104.1 Cannabis sativa PK23104.1 N 0.780
SB03G031190 Sorghum bicolor Sb03g031190 N 0.780
GRMZM2G169116 Zea mays GRMZM2G169116 N 0.780
GRMZM2G127780 Zea mays GRMZM2G127780 N 0.780
cassava17772.valid.m1 Manihot esculenta cassava17772.valid.m1 N 0.780
cassava17771.valid.m1 Manihot esculenta cassava17771.valid.m1 N 0.780
SB07G006330 Sorghum bicolor Sb07g006330 N 0.780
ppa003664m Prunus persica ppa003664m N 0.780
LOC_Os04g51940 Oryza sativa LOC_Os04g51940 N 0.780
MDP0000286471 Malus x domestica MDP0000286471 N 0.769
MDP0000231231 Malus x domestica MDP0000231231 N 0.769
MDP0000171737 Malus x domestica MDP0000171737 N 0.769
PDK_20s1906441g001 Phoenix dactylifera PDK_20s1906441g001 N 0.769
29955.m001158 Ricinus communis 29955.m001158 N 0.769
BRADI3G18190 Brachypodium distachyon BRADI3G18190 N 0.769
GRMZM2G442195 Zea mays GRMZM2G442195 N 0.758
BGIOSIBCE026930 Oryza indica BGIOSIBCE026930 N 0.758
B9GMK5_POPTR Populus trichocarpa POPTR_0001s13870 N 0.758
B9HYD4_POPTR Populus trichocarpa POPTR_0010s18300 N 0.758
XM_002882758.1 Arabidopsis lyrata fgenesh2_kg.3__1376__AT3G13060.2 N 0.758
MDP0000405927 Malus x domestica MDP0000405927 N 0.758
Medtr2g085380 Medicago truncatula Medtr2g085380 N 0.758
ppa002483m Prunus persica ppa002483m N 0.758
Medtr4g163280 Medicago truncatula Medtr4g163280 N 0.758
MDP0000287088 Malus x domestica MDP0000287088 N 0.758
B9HG69_POPTR Populus trichocarpa POPTR_0007s15150 N 0.758
LOC_Os08g12760 Oryza sativa LOC_Os08g12760 N 0.758
MDP0000199885 Malus x domestica MDP0000199885 N 0.758
mgf019821m Mimulus guttatus mgf019821m N 0.758
Glyma07g00280.1 Glycine max Glyma07g00280.1 N 0.758
MDP0000256033 Malus x domestica MDP0000256033 N 0.758
ECT5 Arabidopsis thaliana AT3G13060-TAIR-G N 0.758
ppa002588m Prunus persica ppa002588m N 0.758
MDP0000617859 Malus x domestica MDP0000617859 N 0.758
LjT10H22.120.nd Lotus japonicus LjT10H22.120.nd N 0.758
Glyma08g24210.1 Glycine max Glyma08g24210.1 N 0.758
SB07G024500 Sorghum bicolor Sb07g024500 N 0.747
MDP0000552419 Malus x domestica MDP0000552419 N 0.747
B9N5D4_POPTR Populus trichocarpa POPTR_0014s00320 N 0.747
cassava1916.valid.m1 Manihot esculenta cassava1916.valid.m1 N 0.747
Glyma08g17240.1 Glycine max Glyma08g17240.1 N 0.747
cassava1918.valid.m1 Manihot esculenta cassava1918.valid.m1 N 0.747
Glyma15g41960.1 Glycine max Glyma15g41960.1 N 0.747
gw1.1.157.1 Selaginella moellendorfii gw1.1.157.1 N 0.747
gw1.181.55.1 Physcomitrella patens gw1.181.55.1 N 0.747
cassava1917.valid.m1 Manihot esculenta cassava1917.valid.m1 N 0.747
MDP0000248088 Malus x domestica MDP0000248088 N 0.747
cassava13322.valid.m1 Manihot esculenta cassava13322.valid.m1 N 0.747
cassava13323.valid.m1 Manihot esculenta cassava13323.valid.m1 N 0.747
cassava13324.valid.m1 Manihot esculenta cassava13324.valid.m1 N 0.747
cassava14932.m1 Manihot esculenta cassava14932.m1 N 0.747
cassava12061.valid.m1 Manihot esculenta cassava12061.valid.m1 N 0.747
B9HI18_POPTR Populus trichocarpa POPTR_0008s08030 N 0.747
chr3.CM0292.380.nc Lotus japonicus chr3.CM0292.380.nc N 0.747
LjSGA_011466.1 Lotus japonicus LjSGA_011466.1 N 0.747
LjSGA_032005.1 Lotus japonicus LjSGA_032005.1 N 0.747
PK17832.1 Cannabis sativa PK17832.1 N 0.747
GSVIVG00036696001 Vitis vinifera GSVIVG00036696001 N 0.747
BRADI3G42640 Brachypodium distachyon BRADI3G42640 N 0.747
BGIOSIBCE016517 Oryza indica BGIOSIBCE016517 N 0.736
cassava6538.valid.m1 Manihot esculenta cassava6538.valid.m1 N 0.736
BGIOSIBCE028829 Oryza indica BGIOSIBCE028829 N 0.736
GSVIVG00032236001 Vitis vinifera GSVIVG00032236001 N 0.736
PDK_20s1631851g001 Phoenix dactylifera PDK_20s1631851g001 N 0.736
BRADI2G12380 Brachypodium distachyon BRADI2G12380 N 0.736
ppa003557m Prunus persica ppa003557m N 0.736
Cucsa.356240 Cucumis sativus Cucsa.356240 N 0.736
mgf014829m Mimulus guttatus mgf014829m N 0.736
mgf001716m Mimulus guttatus mgf001716m N 0.736
GRMZM2G025488 Zea mays GRMZM2G025488 N 0.736
PK26094.1 Cannabis sativa PK26094.1 N 0.736
ECT8 Arabidopsis thaliana AT1G79270-TAIR-G N 0.736
XM_002887730.1 Arabidopsis lyrata fgenesh2_kg.2__2224__AT1G79270.1 N 0.736
LOC_Os08g44200 Oryza sativa LOC_Os08g44200 N 0.736
29929.m004643 Ricinus communis 29929.m004643 N 0.736
GSVIVG00029460001 Vitis vinifera GSVIVG00029460001 N 0.736
MDP0000488248 Malus x domestica MDP0000488248 N 0.736
Sb01g046550 Sorghum bicolor Sb01g046550 N 0.725
GRMZM2G330019 Zea mays GRMZM2G330019 N 0.725
GRMZM2G076062 Zea mays GRMZM2G076062 N 0.725
mgf009938m Mimulus guttatus mgf009938m N 0.725
29890.m000285 Ricinus communis 29890.m000285 N 0.725
mgf013853m Mimulus guttatus mgf013853m N 0.725
SB06G027960 Sorghum bicolor Sb06g027960 N 0.725
PK05579.1 Cannabis sativa PK05579.1 N 0.725
PK01736.1 Cannabis sativa PK01736.1 N 0.714
mgf019846m Mimulus guttatus mgf019846m N 0.714
LOC_Os05g01520 Oryza sativa LOC_Os05g01520 N 0.714
LOC_Os01g22630 Oryza sativa LOC_Os01g22630 N 0.714
BGIOSIBCE017245 Oryza indica BGIOSIBCE017245 N 0.714
chr6.CM0885.320.nc Lotus japonicus chr6.CM0885.320.nc N 0.714
chr6.CM0885.260.nc Lotus japonicus chr6.CM0885.260.nc N 0.714
Medtr2g005610 Medicago truncatula Medtr2g005610 N 0.714
gw1.198.66.1 Physcomitrella patens gw1.198.66.1 N 0.714
29765.m000746 Ricinus communis 29765.m000746 N 0.714
GSVIVG00010494001 Vitis vinifera GSVIVG00010494001 N 0.714
ppa002677m Prunus persica ppa002677m N 0.703
mgf013935m Mimulus guttatus mgf013935m N 0.703
BRADI1G74560 Brachypodium distachyon BRADI1G74560 N 0.703
B9N817_POPTR Populus trichocarpa POPTR_0018s14670 N 0.703
B9N0D5_POPTR Populus trichocarpa POPTR_0004s23250 N 0.703
GSVIVG00023248001 Vitis vinifera GSVIVG00023248001 N 0.703
XM_002884922.1 Arabidopsis lyrata fgenesh2_kg.3__1434__AT3G13460.1 N 0.703
ECT2 Arabidopsis thaliana AT3G13460-TAIR-G N 0.703
Glyma16g00490.1 Glycine max Glyma16g00490.1 N 0.703