PCBP3 (Microcebus murinus)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 ENSMICG00000012679 T19014_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
Pcbp3
M188_0.6 		Mus musculus UUUYCC RNAcompete
Ray et al.(2013)
RNCMPT00215 		0.904
pcbp2
M211_0.6 		Danio rerio WWUCCC RNAcompete
Ray et al.(2013)
RNCMPT00246 		0.787
PCBP2
M043_0.6 		Homo sapiens CCYYCCH RNAcompete
Ray et al.(2013)
RNCMPT00044 		0.787
Pcbp1
M207_0.6 		Mus musculus CYUUCC RNAcompete
Ray et al.(2013)
RNCMPT00239 		0.766
PCBP1
M177_0.6 		Homo sapiens CCWWHCC RNAcompete
Ray et al.(2013)
RNCMPT00186 		0.766
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSMICP00000011548 KH 30 74
ENSMICP00000011548 KH 98 161
ENSMICP00000011548 KH 242 304

Links

Other KH family RBPs
Other Microcebus murinus RBPs

96 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AAH41241 Xenopus laevis AAH41241 I 0.782
AAH84195 Xenopus laevis AAH84195 I 0.782
Ame_R002707 Ailuropoda melanoleuca Ame_R002707 I 0.766
Ame_R007160 Ailuropoda melanoleuca Ame_R007160 I 0.988
Ame_R011627 Ailuropoda melanoleuca Ame_R011627 I 0.849
CAB50743 Xenopus laevis CAB50743 I 0.782
CAD29864 Xenopus laevis CAD29864 I 0.782
ENSACAG00000000783 Anolis carolinensis ENSACAG00000000783 I 0.787
PCBP3 Anolis carolinensis ENSACAG00000004607 I 0.904
ENSACAG00000009819 Anolis carolinensis ENSACAG00000009819 I 0.862
PCBP1_BOVIN Bos taurus ENSBTAG00000008985 I 0.766
Q3SYT9_BOVIN Bos taurus ENSBTAG00000020757 I 0.787
Q17QV0_BOVIN Bos taurus ENSBTAG00000030775 I 0.894
PCBP2 Canis familiaris ENSCAFG00000006821 I 0.787
PCBP1 Canis familiaris ENSCAFG00000013845 I 0.745
LOC100408015 Callithrix jacchus ENSCJAG00000001903 I 0.904
PCBP1 Callithrix jacchus ENSCJAG00000004017 I 0.739
LOC100409398 Callithrix jacchus ENSCJAG00000007694 I 0.734
LOC100392590 Callithrix jacchus ENSCJAG00000018590 I 0.814
A6MKZ3_CALJA Callithrix jacchus ENSCJAG00000022539 I 0.761
ENSCJAG00000034075 Callithrix jacchus ENSCJAG00000034075 I 0.782
ENSCPOG00000000967 Cavia porcellus ENSCPOG00000000967 I 0.787
PCBP3 Cavia porcellus ENSCPOG00000003648 I 0.904
PCBP1 Cavia porcellus ENSCPOG00000013511 I 0.766
pcbp2 Danio rerio ENSDARG00000013184 D 0.787
pcbp3 Danio rerio ENSDARG00000054378 I 0.971
PCBP2 Dasypus novemcinctus ENSDNOG00000008688 I 0.787
LOC100050579 Equus caballus ENSECAG00000002544 I 0.766
LOC100050101 Equus caballus ENSECAG00000012413 I 0.904
PCBP2 Equus caballus ENSECAG00000022389 I 0.787
PCBP2 Echinops telfairi ENSETEG00000014741 I 0.711
PCBP3 Echinops telfairi ENSETEG00000015988 I 0.755
PCBP3 Felis catus ENSFCAG00000014812 I 0.936
PCBP1 Homo sapiens ENSG00000169564 D 0.766
PCBP3 Homo sapiens ENSG00000183570 I 0.904
PCBP2 Homo sapiens ENSG00000197111 D 0.826
PCBP3 Gasterosteus aculeatus ENSGACG00000002266 I 0.872
ENSGACG00000003044 Gasterosteus aculeatus ENSGACG00000003044 I 0.705
ENSGACG00000003197 Gasterosteus aculeatus ENSGACG00000003197 I 0.766
ENSGACG00000006681 Gasterosteus aculeatus ENSGACG00000006681 I 0.766
PCBP3 Gasterosteus aculeatus ENSGACG00000014955 I 0.878
PCBP3 Gallus gallus ENSGALG00000004394 I 0.862
PCBP3 Gallus gallus ENSGALG00000013155 I 0.867
PCBP3 Gorilla gorilla ENSGGOG00000003683 I 0.904
PCBP2 Gorilla gorilla ENSGGOG00000012613 I 0.787
PCBP1 Gorilla gorilla ENSGGOG00000028130 I 0.766
ENSLAFG00000013187 Loxodonta africana ENSLAFG00000013187 I 0.787
PCBP3 Loxodonta africana ENSLAFG00000020835 I 0.977
PCBP2 Macropus eugenii ENSMEUG00000001887 I 0.702
PCBP3 Macropus eugenii ENSMEUG00000012960 I 0.856
PCBP3 Meleagris gallopavo ENSMGAG00000001883 I 0.904
ENSMGAG00000006794 Meleagris gallopavo ENSMGAG00000006794 I 0.872
PCBP2 Microcebus murinus ENSMICG00000011651 I 0.787
PCBP3 Myotis lucifugus ENSMLUG00000003074 I 0.936
PCBP1 Myotis lucifugus ENSMLUG00000014173 I 0.766
PCBP3 Macaca mulatta ENSMMUG00000003825 I 0.904
PCBP2 Macaca mulatta ENSMMUG00000006608 I 0.809
ENSMODG00000000280 Monodelphis domestica ENSMODG00000000280 I 0.787
ENSMODG00000017748 Monodelphis domestica ENSMODG00000017748 I 0.741
Pcbp3 Mus musculus ENSMUSG00000001120 D 0.904
Pcbp1 Mus musculus ENSMUSG00000051695 D 0.766
Pcbp2 Mus musculus ENSMUSG00000056851 I 0.787
PCBP3 Oryctolagus cuniculus ENSOCUG00000002696 I 0.904
PCBP1_RABIT Oryctolagus cuniculus ENSOCUG00000003634 I 0.766
ENSOCUG00000022490 Oryctolagus cuniculus ENSOCUG00000022490 I 0.787
PCBP3 Otolemur garnettii ENSOGAG00000008044 I 0.977
PCBP3 Ochotona princeps ENSOPRG00000003431 I 0.909
PCBP2 Ochotona princeps ENSOPRG00000004680 I 0.787
PCBP3 Oryzias latipes ENSORLG00000000059 I 0.836
ENSORLG00000005176 Oryzias latipes ENSORLG00000005176 I 0.771
ENSORLG00000012872 Oryzias latipes ENSORLG00000012872 I 0.761
ENSORLG00000014385 Oryzias latipes ENSORLG00000014385 I 0.761
PCBP2 Procavia capensis ENSPCAG00000005154 I 0.787
ENSPPYG00000004581 Pongo pygmaeus ENSPPYG00000004581 I 0.787
ENSPPYG00000012328 Pongo pygmaeus ENSPPYG00000012328 I 0.766
PCBP2 Pan troglodytes ENSPTRG00000005018 I 0.787
PCBP1 Pan troglodytes ENSPTRG00000012025 I 0.766
PCBP3 Pan troglodytes ENSPTRG00000014010 I 0.904
PCBP3 Pteropus vampyrus ENSPVAG00000000832 I 0.723
PCBP2 Pteropus vampyrus ENSPVAG00000012284 I 0.787
Pcbp3 Rattus norvegicus ENSRNOG00000001245 I 0.904
Pcbp1 Rattus norvegicus ENSRNOG00000017708 I 0.766
PCBP2 Sus scrofa ENSSSCG00000000274 I 0.787
PCBP3-2 Taeniopygia guttata ENSTGUG00000008158 I 0.867
PCBP3 Tetraodon nigroviridis ENSTNIG00000010615 I 0.883
PCBP1 Tetraodon nigroviridis ENSTNIG00000012585 I 0.761
PCBP3 Takifugu rubripes ENSTRUG00000006280 I 0.883
ENSTRUG00000009361 Takifugu rubripes ENSTRUG00000009361 I 0.766
ENSTRUG00000011419 Takifugu rubripes ENSTRUG00000011419 I 0.776
PCBP3 Takifugu rubripes ENSTRUG00000013604 I 0.907
PCBP2 Tarsius syrichta ENSTSYG00000009771 I 0.827
PCBP3 Tursiops truncatus ENSTTRG00000015075 I 0.904
PCBP2 Tursiops truncatus ENSTTRG00000017174 I 0.787
pcbp3 Xenopus tropicalis ENSXETG00000012658 I 0.782
estExt_gwp.C_3950051 Branchiostoma floridae estExt_gwp.C_3950051 I 0.704
fgenesh2_pg.scaffold_166000022 Branchiostoma floridae fgenesh2_pg.scaffold_166000022 I 0.704