Ame_R007160 (Ailuropoda melanoleuca)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 Ame_R007160 T21584_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
Pcbp3
M188_0.6 		Mus musculus UUUYCC RNAcompete
Ray et al.(2013)
RNCMPT00215 		0.910
pcbp2
M211_0.6 		Danio rerio WWUCCC RNAcompete
Ray et al.(2013)
RNCMPT00246 		0.793
PCBP2
M043_0.6 		Homo sapiens CCYYCCH RNAcompete
Ray et al.(2013)
RNCMPT00044 		0.793
Pcbp1
M207_0.6 		Mus musculus CYUUCC RNAcompete
Ray et al.(2013)
RNCMPT00239 		0.771
PCBP1
M177_0.6 		Homo sapiens CCWWHCC RNAcompete
Ray et al.(2013)
RNCMPT00186 		0.771
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
Ame_R007160 KH 4 48
Ame_R007160 KH 72 135
Ame_R007160 KH 258 320

Links

Other KH family RBPs
Other Ailuropoda melanoleuca RBPs

97 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
PCBP3 Microcebus murinus ENSMICG00000012679 I 0.988
PCBP3 Loxodonta africana ENSLAFG00000020835 I 0.983
pcbp3 Danio rerio ENSDARG00000054378 I 0.983
PCBP3 Otolemur garnettii ENSOGAG00000008044 I 0.983
PCBP3 Myotis lucifugus ENSMLUG00000003074 I 0.942
PCBP3 Felis catus ENSFCAG00000014812 I 0.942
PCBP3 Ochotona princeps ENSOPRG00000003431 I 0.914
PCBP3 Takifugu rubripes ENSTRUG00000013604 I 0.913
LOC100050101 Equus caballus ENSECAG00000012413 I 0.910
PCBP3 Gorilla gorilla ENSGGOG00000003683 I 0.910
PCBP3 Homo sapiens ENSG00000183570 I 0.910
Pcbp3 Mus musculus ENSMUSG00000001120 D 0.910
Pcbp3 Rattus norvegicus ENSRNOG00000001245 I 0.910
PCBP3 Tursiops truncatus ENSTTRG00000015075 I 0.910
PCBP3 Pan troglodytes ENSPTRG00000014010 I 0.910
PCBP3 Oryctolagus cuniculus ENSOCUG00000002696 I 0.910
PCBP3 Cavia porcellus ENSCPOG00000003648 I 0.910
PCBP3 Macaca mulatta ENSMMUG00000003825 I 0.910
PCBP3 Meleagris gallopavo ENSMGAG00000001883 I 0.910
PCBP3 Anolis carolinensis ENSACAG00000004607 I 0.910
LOC100408015 Callithrix jacchus ENSCJAG00000001903 I 0.910
Q17QV0_BOVIN Bos taurus ENSBTAG00000030775 I 0.899
PCBP3 Takifugu rubripes ENSTRUG00000006280 I 0.888
PCBP3 Tetraodon nigroviridis ENSTNIG00000010615 I 0.888
PCBP3 Gasterosteus aculeatus ENSGACG00000014955 I 0.883
PCBP3 Gasterosteus aculeatus ENSGACG00000002266 I 0.878
ENSMGAG00000006794 Meleagris gallopavo ENSMGAG00000006794 I 0.877
PCBP3 Gallus gallus ENSGALG00000013155 I 0.872
PCBP3-2 Taeniopygia guttata ENSTGUG00000008158 I 0.872
ENSACAG00000009819 Anolis carolinensis ENSACAG00000009819 I 0.867
PCBP3 Gallus gallus ENSGALG00000004394 I 0.867
PCBP3 Macropus eugenii ENSMEUG00000012960 I 0.862
Ame_R011627 Ailuropoda melanoleuca Ame_R011627 I 0.860
PCBP3 Oryzias latipes ENSORLG00000000059 I 0.841
PCBP2 Tarsius syrichta ENSTSYG00000009771 I 0.832
PCBP2 Homo sapiens ENSG00000197111 D 0.831
LOC100392590 Callithrix jacchus ENSCJAG00000018590 I 0.820
PCBP2 Macaca mulatta ENSMMUG00000006608 I 0.814
ENSCPOG00000000967 Cavia porcellus ENSCPOG00000000967 I 0.793
pcbp2 Danio rerio ENSDARG00000013184 D 0.793
Pcbp2 Mus musculus ENSMUSG00000056851 I 0.793
ENSMODG00000000280 Monodelphis domestica ENSMODG00000000280 I 0.793
ENSACAG00000000783 Anolis carolinensis ENSACAG00000000783 I 0.793
PCBP2 Pan troglodytes ENSPTRG00000005018 I 0.793
PCBP2 Pteropus vampyrus ENSPVAG00000012284 I 0.793
PCBP2 Sus scrofa ENSSSCG00000000274 I 0.793
ENSPPYG00000004581 Pongo pygmaeus ENSPPYG00000004581 I 0.793
PCBP2 Procavia capensis ENSPCAG00000005154 I 0.793
PCBP2 Canis familiaris ENSCAFG00000006821 I 0.793
PCBP2 Ochotona princeps ENSOPRG00000004680 I 0.793
ENSOCUG00000022490 Oryctolagus cuniculus ENSOCUG00000022490 I 0.793
Q3SYT9_BOVIN Bos taurus ENSBTAG00000020757 I 0.793
PCBP2 Gorilla gorilla ENSGGOG00000012613 I 0.793
PCBP2 Dasypus novemcinctus ENSDNOG00000008688 I 0.793
PCBP2 Equus caballus ENSECAG00000022389 I 0.793
ENSLAFG00000013187 Loxodonta africana ENSLAFG00000013187 I 0.793
PCBP2 Tursiops truncatus ENSTTRG00000017174 I 0.793
PCBP2 Microcebus murinus ENSMICG00000011651 I 0.793
pcbp3 Xenopus tropicalis ENSXETG00000012658 I 0.787
CAD29864 Xenopus laevis CAD29864 I 0.787
AAH41241 Xenopus laevis AAH41241 I 0.787
AAH84195 Xenopus laevis AAH84195 I 0.787
ENSCJAG00000034075 Callithrix jacchus ENSCJAG00000034075 I 0.787
CAB50743 Xenopus laevis CAB50743 I 0.787
ENSTRUG00000011419 Takifugu rubripes ENSTRUG00000011419 I 0.781
ENSORLG00000005176 Oryzias latipes ENSORLG00000005176 I 0.777
LOC100050579 Equus caballus ENSECAG00000002544 I 0.771
ENSPPYG00000012328 Pongo pygmaeus ENSPPYG00000012328 I 0.771
PCBP1 Pan troglodytes ENSPTRG00000012025 I 0.771
Pcbp1 Rattus norvegicus ENSRNOG00000017708 I 0.771
Ame_R002707 Ailuropoda melanoleuca Ame_R002707 I 0.771
PCBP1 Myotis lucifugus ENSMLUG00000014173 I 0.771
ENSTRUG00000009361 Takifugu rubripes ENSTRUG00000009361 I 0.771
PCBP1 Cavia porcellus ENSCPOG00000013511 I 0.771
Pcbp1 Mus musculus ENSMUSG00000051695 D 0.771
PCBP1_BOVIN Bos taurus ENSBTAG00000008985 I 0.771
PCBP1_RABIT Oryctolagus cuniculus ENSOCUG00000003634 I 0.771
ENSGACG00000006681 Gasterosteus aculeatus ENSGACG00000006681 I 0.771
PCBP1 Gorilla gorilla ENSGGOG00000028130 I 0.771
PCBP1 Homo sapiens ENSG00000169564 D 0.771
ENSGACG00000003197 Gasterosteus aculeatus ENSGACG00000003197 I 0.771
PCBP1 Tetraodon nigroviridis ENSTNIG00000012585 I 0.766
A6MKZ3_CALJA Callithrix jacchus ENSCJAG00000022539 I 0.766
ENSORLG00000012872 Oryzias latipes ENSORLG00000012872 I 0.766
ENSORLG00000014385 Oryzias latipes ENSORLG00000014385 I 0.766
PCBP3 Echinops telfairi ENSETEG00000015988 I 0.761
PCBP1 Canis familiaris ENSCAFG00000013845 I 0.750
ENSMODG00000017748 Monodelphis domestica ENSMODG00000017748 I 0.746
PCBP1 Callithrix jacchus ENSCJAG00000004017 I 0.745
LOC100409398 Callithrix jacchus ENSCJAG00000007694 I 0.739
PCBP3 Pteropus vampyrus ENSPVAG00000000832 I 0.729
PCBP2 Echinops telfairi ENSETEG00000014741 I 0.716
ENSGACG00000003044 Gasterosteus aculeatus ENSGACG00000003044 I 0.711
estExt_gwp.C_3950051 Branchiostoma floridae estExt_gwp.C_3950051 I 0.709
fgenesh2_pg.scaffold_166000022 Branchiostoma floridae fgenesh2_pg.scaffold_166000022 I 0.709
PCBP2 Macropus eugenii ENSMEUG00000001887 I 0.707
PCBP3 Tetraodon nigroviridis ENSTNIG00000008872 I 0.700