PCBP2 (Myotis lucifugus)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 ENSMLUG00000009971 T19038_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
PCBP2
M043_0.6 		Homo sapiens CCYYCCH RNAcompete
Ray et al.(2013)
RNCMPT00044 		0.856
pcbp2
M211_0.6 		Danio rerio WWUCCC RNAcompete
Ray et al.(2013)
RNCMPT00246 		0.819
Pcbp1
M207_0.6 		Mus musculus CYUUCC RNAcompete
Ray et al.(2013)
RNCMPT00239 		0.798
PCBP1
M177_0.6 		Homo sapiens CCWWHCC RNAcompete
Ray et al.(2013)
RNCMPT00186 		0.798
Pcbp3
M188_0.6 		Mus musculus UUUYCC RNAcompete
Ray et al.(2013)
RNCMPT00215 		0.745
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSMLUP00000009098 KH 15 75
ENSMLUP00000009098 KH 125 162
ENSMLUP00000009098 KH 290 352

Links

Other KH family RBPs
Other Myotis lucifugus RBPs

90 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
BC1G_04395 Botrytis cinerea BC1G_04395 N 0.000
AFLA_046450 Aspergillus flavus CADAFLAG00005972 N 0.000
AFUA_2G08570 Aspergillus fumigatus CADAFUAG00004718 N 0.000
An12g03930 Aspergillus niger CADANGAG00009835 N 0.000
NFIA_084190 Neosartorya fischeri CADNFIAG00008064 N 0.000
CNBG_4502 Cryptococcus neoformans CNBG_4502 N 0.000
estExt_fgenesh1_kg.C_sca_10_chr8_2_00014 Nectria haematococca estExt_fgenesh1_kg.C_sca_10_chr8_2_00014 N 0.000
estExt_fgenesh1_pm.C_20437 Schizophyllum commune estExt_fgenesh1_pm.C_20437 N 0.000
estExt_fgenesh2_kg.C_120041 Serpula lacrymans estExt_fgenesh2_kg.C_120041 N 0.000
estExt_fgenesh2_kg.C_20664 Agaricus bisporus estExt_fgenesh2_kg.C_20664 N 0.000
estExt_Genewise1Plus.C_40730 Myceliophthora thermophila estExt_Genewise1Plus.C_40730 N 0.000
estExt_Genewise1Plus.C_50921 Neurospora discreta estExt_Genewise1Plus.C_50921 N 0.000
estExt_Genewise1_worm.C_60324 Laccaria bicolor estExt_Genewise1_worm.C_60324 N 0.000
e_gw1.10.746.1 Trichoderma virens e_gw1.10.746.1 N 0.000
e_gw1.17.191.1 Trichoderma reesei e_gw1.17.191.1 N 0.000
e_gw1.3.1174.1 Thielavia terrestris e_gw1.3.1174.1 N 0.000
e_gw1.40.70.1 Melampsora laricis populina e_gw1.40.70.1 N 0.000
fgenesh1_pg.C_scaffold_1000747 Cryphonectria parasitica fgenesh1_pg.C_scaffold_1000747 N 0.000
fgenesh1_pm.00772_#_82 Aspergillus carbonarius fgenesh1_pm.00772_#_82 N 0.000
fgeneshMC_pm.5_#_40 Mucor circinelloides fgeneshMC_pm.5_#_40 N 0.000
FVEG_07036 Fusarium verticillioides FVEG_07036 N 0.000
gw1.1.1171.1 Sporobolomyces roseus gw1.1.1171.1 N 0.000
gw1.1.2136.1 Pleurotus ostreatus gw1.1.2136.1 N 0.000
gw1.29.143.1 Phycomyces blakesleeanus gw1.29.143.1 N 0.000
gwh2.1.1054.1 Phanerochaete chrysosporium gwh2.1.1054.1 N 0.000
NCU00210 Neurospora crassa NCU00210 N 0.000
Pa_7_2520 Podospora anserina Pa_7_2520 N 0.000
Pc13g04070 Penicillium chrysogenum Pc13g04070 N 0.000
PGTG_01720 Puccinia graminis PGTG_01720 N 0.000
PMAA_070830 Penicillium marneffei PMAA_070830 N 0.000
SJAG_01064 Schizosaccharomyces japonicus SJAG_01064 N 0.000
SPPG_00516 Spizellomyces punctatus SPPG_00516 N 0.000
SS1G_13629 Sclerotinia sclerotiorum SS1G_13629 N 0.000
UM04861 Ustilago maydis UM04861 N 0.000
XP_001187788.1 Strongylocentrotus purpuratus XP_001187788.1 N 0.000
XP_802051.1 Strongylocentrotus purpuratus XP_802051.1 N 0.000