mgf011994m (Mimulus guttatus)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 mgf011994m T21298_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
mgf011994m KH 151 220

Links

Other KH family RBPs
Other Mimulus guttatus RBPs

55 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
27955.m000377 Ricinus communis 27955.m000377 N 0.787
28128.m000156 Ricinus communis 28128.m000156 N 0.709
29945.m000086 Ricinus communis 29945.m000086 N 0.829
AT2G38610 Arabidopsis thaliana AT2G38610-TAIR-G N 0.734
AT3G08620 Arabidopsis thaliana AT3G08620-TAIR-G N 0.750
BGIOSIBCE013438 Oryza indica BGIOSIBCE013438 N 0.767
BGIOSIBCE024206 Oryza indica BGIOSIBCE024206 N 0.785
BRADI1G04120 Brachypodium distachyon BRADI1G04120 N 0.734
BRADI1G53760 Brachypodium distachyon BRADI1G53760 N 0.716
cassava25198.valid.m1 Manihot esculenta cassava25198.valid.m1 N 0.806
cassava38069.valid.m1 Manihot esculenta cassava38069.valid.m1 N 0.814
cassava39581.m1 Manihot esculenta cassava39581.m1 N 0.808
chr3.CM0634.210.nc Lotus japonicus chr3.CM0634.210.nc N 0.776
Cucsa.130740 Cucumis sativus Cucsa.130740 N 0.776
Cucsa.177080 Cucumis sativus Cucsa.177080 N 0.760
XM_002882529.1 Arabidopsis lyrata fgenesh2_kg.3__864__AT3G08620.1 N 0.737
XM_002881558.1 Arabidopsis lyrata fgenesh2_kg.4__1930__AT2G38610.2 N 0.734
Glyma02g40440.1 Glycine max Glyma02g40440.1 N 0.763
Glyma03g00370.1 Glycine max Glyma03g00370.1 N 0.723
Glyma09g40820.1 Glycine max Glyma09g40820.1 N 0.789
Glyma11g31530.1 Glycine max Glyma11g31530.1 N 0.800
Glyma14g38730.1 Glycine max Glyma14g38730.1 N 0.763
Glyma16g34750.1 Glycine max Glyma16g34750.1 N 0.822
Glyma18g05680.1 Glycine max Glyma18g05680.1 N 0.723
Glyma18g44980.1 Glycine max Glyma18g44980.1 N 0.803
GRMZM2G063643 Zea mays GRMZM2G063643 N 0.806
GRMZM2G108677 Zea mays GRMZM2G108677 N 0.795
GRMZM2G472052 Zea mays GRMZM2G472052 N 0.859
GSVIVG00024534001 Vitis vinifera GSVIVG00024534001 N 0.757
GSVIVG00029865001 Vitis vinifera GSVIVG00029865001 N 0.792
LjSGA_139736.1.1 Lotus japonicus LjSGA_139736.1.1 N 0.769
LjT28H07.110.nc Lotus japonicus LjT28H07.110.nc N 0.789
LOC_Os03g60110 Oryza sativa LOC_Os03g60110 N 0.795
LOC_Os07g12490 Oryza sativa LOC_Os07g12490 N 0.785
MDP0000077753 Malus x domestica MDP0000077753 N 0.704
MDP0000119110 Malus x domestica MDP0000119110 N 0.822
MDP0000186494 Malus x domestica MDP0000186494 N 0.811
MDP0000268130 Malus x domestica MDP0000268130 N 0.704
MDP0000501473 Malus x domestica MDP0000501473 N 0.822
MDP0000665847 Malus x domestica MDP0000665847 N 0.811
Medtr3g083820 Medicago truncatula Medtr3g083820 N 0.737
Medtr5g083520 Medicago truncatula Medtr5g083520 N 0.776
Medtr7g080640 Medicago truncatula Medtr7g080640 N 0.737
Medtr8g005290 Medicago truncatula Medtr8g005290 N 0.836
Medtr8g005390 Medicago truncatula Medtr8g005390 N 0.836
mgf005196m Mimulus guttatus mgf005196m N 0.750
PDK_20s1595621g003 Phoenix dactylifera PDK_20s1595621g003 N 0.787
PK22673.1 Cannabis sativa PK22673.1 N 0.803
PK23097.1 Cannabis sativa PK23097.1 N 0.822
B9IGX2_POPTR Populus trichocarpa POPTR_0006s11210 N 0.776
B9I777_POPTR Populus trichocarpa POPTR_0013s15580 N 0.814
B9INJ7_POPTR Populus trichocarpa POPTR_0019s15270 N 0.806
ppa009701m Prunus persica ppa009701m N 0.789
SB01G003680 Sorghum bicolor Sb01g003680 N 0.808
SB02G006770 Sorghum bicolor Sb02g006770 N 0.859