GRMZM2G108677 (Zea mays)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 GRMZM2G108677 T21370_0.6 MaizeSequence (2009-Oct-16)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
GRMZM2G108677_P01 KH 142 214

Links

Other KH family RBPs
Other Zea mays RBPs

51 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
27955.m000377 Ricinus communis 27955.m000377 N 0.800
29945.m000086 Ricinus communis 29945.m000086 N 0.808
AT2G38610 Arabidopsis thaliana AT2G38610-TAIR-G N 0.772
AT3G08620 Arabidopsis thaliana AT3G08620-TAIR-G N 0.737
BGIOSIBCE013438 Oryza indica BGIOSIBCE013438 N 0.932
BGIOSIBCE024206 Oryza indica BGIOSIBCE024206 N 0.732
BRADI1G04120 Brachypodium distachyon BRADI1G04120 N 0.825
BRADI1G53760 Brachypodium distachyon BRADI1G53760 N 0.744
BRADI2G22090 Brachypodium distachyon BRADI2G22090 N 0.714
cassava25198.valid.m1 Manihot esculenta cassava25198.valid.m1 N 0.808
cassava38069.valid.m1 Manihot esculenta cassava38069.valid.m1 N 0.753
cassava39581.m1 Manihot esculenta cassava39581.m1 N 0.808
chr3.CM0634.210.nc Lotus japonicus chr3.CM0634.210.nc N 0.789
Cucsa.130740 Cucumis sativus Cucsa.130740 N 0.750
Cucsa.177080 Cucumis sativus Cucsa.177080 N 0.773
XM_002882529.1 Arabidopsis lyrata fgenesh2_kg.3__864__AT3G08620.1 N 0.711
XM_002881558.1 Arabidopsis lyrata fgenesh2_kg.4__1930__AT2G38610.2 N 0.772
Glyma03g00370.1 Glycine max Glyma03g00370.1 N 0.711
Glyma09g40820.1 Glycine max Glyma09g40820.1 N 0.763
Glyma11g31530.1 Glycine max Glyma11g31530.1 N 0.773
Glyma16g34750.1 Glycine max Glyma16g34750.1 N 0.795
Glyma18g05680.1 Glycine max Glyma18g05680.1 N 0.723
Glyma18g44980.1 Glycine max Glyma18g44980.1 N 0.776
GRMZM2G063643 Zea mays GRMZM2G063643 N 0.849
GRMZM2G085582 Zea mays GRMZM2G085582 N 0.711
GRMZM2G472052 Zea mays GRMZM2G472052 N 0.863
GSVIVG00029865001 Vitis vinifera GSVIVG00029865001 N 0.836
LjSGA_139736.1.1 Lotus japonicus LjSGA_139736.1.1 N 0.704
LjT28H07.110.nc Lotus japonicus LjT28H07.110.nc N 0.763
LOC_Os01g60260 Oryza sativa LOC_Os01g60260 N 0.707
LOC_Os03g60110 Oryza sativa LOC_Os03g60110 N 0.959
LOC_Os07g12490 Oryza sativa LOC_Os07g12490 N 0.732
MDP0000119110 Malus x domestica MDP0000119110 N 0.808
MDP0000186494 Malus x domestica MDP0000186494 N 0.784
MDP0000501473 Malus x domestica MDP0000501473 N 0.808
MDP0000665847 Malus x domestica MDP0000665847 N 0.784
Medtr3g083820 Medicago truncatula Medtr3g083820 N 0.750
Medtr7g080640 Medicago truncatula Medtr7g080640 N 0.750
Medtr8g005290 Medicago truncatula Medtr8g005290 N 0.808
Medtr8g005390 Medicago truncatula Medtr8g005390 N 0.808
mgf005196m Mimulus guttatus mgf005196m N 0.763
mgf011994m Mimulus guttatus mgf011994m N 0.795
PDK_20s1595621g003 Phoenix dactylifera PDK_20s1595621g003 N 0.800
PK22673.1 Cannabis sativa PK22673.1 N 0.750
PK23097.1 Cannabis sativa PK23097.1 N 0.795
B9IGX2_POPTR Populus trichocarpa POPTR_0006s11210 N 0.789
B9I777_POPTR Populus trichocarpa POPTR_0013s15580 N 0.740
B9INJ7_POPTR Populus trichocarpa POPTR_0019s15270 N 0.781
ppa009701m Prunus persica ppa009701m N 0.763
SB01G003680 Sorghum bicolor Sb01g003680 N 0.986
SB02G006770 Sorghum bicolor Sb02g006770 N 0.849