BRADI3G13740 (Brachypodium distachyon)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 BRADI3G13740 T33227_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
BRADI3G13740.1 RRM 159 226
BRADI3G13740.1 RRM 256 324

Links

Other RRM family RBPs
Other Brachypodium distachyon RBPs

75 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
29485.m000140 Ricinus communis 29485.m000140 N 0.832
29650.m000268 Ricinus communis 29650.m000268 N 0.752
30068.m002593 Ricinus communis 30068.m002593 N 0.891
XM_002894411.1 Arabidopsis lyrata Al_scaffold_0001_4812 N 0.737
CID11 Arabidopsis thaliana AT1G32790-TAIR-G N 0.847
CID8 Arabidopsis thaliana AT1G53650-TAIR-G N 0.730
CID9 Arabidopsis thaliana AT3G14450-TAIR-G N 0.745
CID10 Arabidopsis thaliana AT3G49390-TAIR-G N 0.766
ATRBP37 Arabidopsis thaliana AT4G10610-TAIR-G N 0.839
CID13 Arabidopsis thaliana AT5G24440-TAIR-G N 0.701
BGIOSIBCE006292 Oryza indica BGIOSIBCE006292 N 0.737
BGIOSIBCE022210 Oryza indica BGIOSIBCE022210 N 0.723
BGIOSIBCE026288 Oryza indica BGIOSIBCE026288 N 0.956
BRADI1G39150 Brachypodium distachyon BRADI1G39150 N 0.737
BRADI2G06650 Brachypodium distachyon BRADI2G06650 N 0.759
BRADI3G09250 Brachypodium distachyon BRADI3G09250 N 0.730
cassava23841.valid.m1 Manihot esculenta cassava23841.valid.m1 N 0.766
cassava37978.valid.m1 Manihot esculenta cassava37978.valid.m1 N 0.825
cassava37979.valid.m1 Manihot esculenta cassava37979.valid.m1 N 0.825
cassava38063.valid.m1 Manihot esculenta cassava38063.valid.m1 N 0.825
cassava38064.valid.m1 Manihot esculenta cassava38064.valid.m1 N 0.825
cassava38065.valid.m1 Manihot esculenta cassava38065.valid.m1 N 0.825
cassava41363.m1 Manihot esculenta cassava41363.m1 N 0.825
cassava41364.m1 Manihot esculenta cassava41364.m1 N 0.825
cassava43127.valid.m1 Manihot esculenta cassava43127.valid.m1 N 0.876
cassava45236.m1 Manihot esculenta cassava45236.m1 N 0.715
chr3.CM0059.50.nd Lotus japonicus chr3.CM0059.50.nd N 0.745
Cucsa.071470 Cucumis sativus Cucsa.071470 N 0.703
Cucsa.273320 Cucumis sativus Cucsa.273320 N 0.825
estExt_Genewise1.C_1960042 Physcomitrella patens estExt_Genewise1.C_1960042 N 0.891
e_gw1.62.48.1 Physcomitrella patens e_gw1.62.48.1 N 0.891
XM_002893696.1 Arabidopsis lyrata fgenesh2_kg.1__3419__AT1G32790.2 N 0.847
XM_002882834.1 Arabidopsis lyrata fgenesh2_kg.3__1570__AT3G14450.1 N 0.752
XM_002877626.1 Arabidopsis lyrata fgenesh2_kg.5__1290__AT3G49390.2 N 0.766
XM_002872481.1 Arabidopsis lyrata fgenesh2_kg.6__3042__AT4G10610.1 N 0.854
Glyma04g40750.1 Glycine max Glyma04g40750.1 N 0.847
Glyma04g40760.1 Glycine max Glyma04g40760.1 N 0.832
Glyma06g14030.1 Glycine max Glyma06g14030.1 N 0.854
Glyma06g14050.1 Glycine max Glyma06g14050.1 N 0.847
Glyma08g18810.1 Glycine max Glyma08g18810.1 N 0.774
Glyma15g40060.1 Glycine max Glyma15g40060.1 N 0.766
GRMZM2G029058 Zea mays GRMZM2G029058 N 0.708
GRMZM2G051043 Zea mays GRMZM2G051043 N 0.730
GRMZM2G069102 Zea mays GRMZM2G069102 N 0.920
GRMZM2G069816 Zea mays GRMZM2G069816 N 0.723
GRMZM2G173428 Zea mays GRMZM2G173428 N 0.934
GRMZM2G349794 Zea mays GRMZM2G349794 N 0.818
GSVIVG00001961001 Vitis vinifera GSVIVG00001961001 N 0.774
GSVIVG00019674001 Vitis vinifera GSVIVG00019674001 N 0.883
GSVIVG00038633001 Vitis vinifera GSVIVG00038633001 N 0.883
gw1.10.957.1 Selaginella moellendorfii gw1.10.957.1 N 0.854
gw1.29.636.1 Selaginella moellendorfii gw1.29.636.1 N 0.854
LOC_Os01g11120 Oryza sativa LOC_Os01g11120 N 0.766
LOC_Os02g14760 Oryza sativa LOC_Os02g14760 N 0.737
LOC_Os06g35030 Oryza sativa LOC_Os06g35030 N 0.737
LOC_Os08g02330 Oryza sativa LOC_Os08g02330 N 0.956
MDP0000233630 Malus x domestica MDP0000233630 N 0.861
Medtr3g122880 Medicago truncatula Medtr3g122880 N 0.832
Medtr3g122920 Medicago truncatula Medtr3g122920 N 0.832
mgf005336m Mimulus guttatus mgf005336m N 0.701
mgf012896m Mimulus guttatus mgf012896m N 0.861
mgf013366m Mimulus guttatus mgf013366m N 0.825
mgf014445m Mimulus guttatus mgf014445m N 0.730
PDK_20s1822231g001 Phoenix dactylifera PDK_20s1822231g001 N 0.745
PK04894.1 Cannabis sativa PK04894.1 N 0.854
PK12463.1 Cannabis sativa PK12463.1 N 0.883
PK28889.1 Cannabis sativa PK28889.1 N 0.774
B9GIT2_POPTR Populus trichocarpa POPTR_0001s45290 N 0.745
B9IDI5_POPTR Populus trichocarpa POPTR_0015s00770 N 0.708
ppa006808m Prunus persica ppa006808m N 0.847
ppa009298m Prunus persica ppa009298m N 0.774
SB03G002180 Sorghum bicolor Sb03g002180 N 0.730
Sb04g008740 Sorghum bicolor Sb04g008740 N 0.737
SB07G001560 Sorghum bicolor Sb07g001560 N 0.934
SB10G021290 Sorghum bicolor Sb10g021290 N 0.708