estExt_Genewise1Plus.C_sca_18_chr2_1_00859 (Nectria haematococca)
S1

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00575 (S1) IPR003029 estExt_Genewise1Plus.C_sca_18_chr2_1_00859 T61180_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
eIF-2alpha
M231_0.6 		Drosophila melanogaster WGCAUG RNAcompete
Ray et al.(2013)
RNCMPT00273 		0.818
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
estExt_Genewise1Plus.C_sca_18_chr2_1_00859 S1 13 88

Links

Other S1 family RBPs
Other Nectria haematococca RBPs

256 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
CBG23235 Caenorhabditis briggsae CBG23235 N 0.000
CBN02327 Caenorhabditis brenneri CBN02327 N 0.000
CJA08180 Caenorhabditis japonica CJA08180 N 0.000
CRE11175 Caenorhabditis remanei CRE11175 N 0.000
zfp36l2 Danio rerio ENSDARG00000021806 I 0.000
ENSORLG00000008378 Oryzias latipes ENSORLG00000008378 I 0.000
ZFP36L2 Tetraodon nigroviridis ENSTNIG00000017103 I 0.000
ZFP36L2 Takifugu rubripes ENSTRUG00000006923 I 0.000
e_gw1.40.110.1 Trichoplax adhaerens e_gw1.40.110.1 I 0.000
ccch-1 Caenorhabditis elegans F38B7.1 N 0.000
gw1.534.24.1 Capitella teleta gw1.534.24.1 I 0.000
Minc02085 Meloidogyne incognita Minc02085 N 0.000