PTSG_04415 (Salpingoeca rosetta)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 PTSG_04415 T17778_0.6 Broad (2011-Oct-27)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
PTSG_04415T0 KH 212 261

Links

Other KH family RBPs
Other Salpingoeca rosetta RBPs

142 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
B9GHH7_POPTR Populus trichocarpa POPTR_0001s47320 N 0.720
estExt_Genewise1.C_10689 Thielavia terrestris estExt_Genewise1.C_10689 N 0.800
estExt_genewise1_human.C_chr_1.20929 Pichia stipitis estExt_genewise1_human.C_chr_1.20929 N 0.720
estExt_Genewise1Plus.C_10659 Myceliophthora thermophila estExt_Genewise1Plus.C_10659 N 0.780
estExt_Genewise1Plus.C_430054 Neurospora tetrasperma estExt_Genewise1Plus.C_430054 N 0.740
estExt_Genewise1Plus.C_600117 Volvox carteri estExt_Genewise1Plus.C_600117 N 0.740
fgenesh1_kg.C_scaffold_5000048 Selaginella moellendorfii fgenesh1_kg.C_scaffold_5000048 N 0.760
fgenesh1_pg.scaffold_18000119 Nematostella vectensis fgenesh1_pg.scaffold_18000119 N 0.760
fgenesh2_pg.scaffold_196000015 Branchiostoma floridae fgenesh2_pg.scaffold_196000015 N 0.740
fgenesh2_pm.scaffold_78000001 Branchiostoma floridae fgenesh2_pm.scaffold_78000001 N 0.740
fgenesh3_pm.54__15 Postia placenta fgenesh3_pm.54__15 N 0.700
fgeneshTA2_pg.C_scaffold_14000176 Trichoplax adhaerens fgeneshTA2_pg.C_scaffold_14000176 N 0.760
GID1.0042265 Dictyostelium purpureum GID1.0042265 N 0.740
Glyma08g44800.1 Glycine max Glyma08g44800.1 N 0.700
Glyma18g08080.1 Glycine max Glyma18g08080.1 N 0.700
Glyma18g08100.1 Glycine max Glyma18g08100.1 N 0.700
estExt_fgeneshHS_pm.C_280002 Naegleria gruberi estExt_fgeneshHS_pm.C_280002 N 0.720
estExt_fgenesh2_pm.C_sca_70005 Lottia gigantea estExt_fgenesh2_pm.C_sca_70005 N 0.700
estExt_fgenesh1_pg.C_110137 Monosiga brevicollis estExt_fgenesh1_pg.C_110137 N 0.780
B9N5M8_POPTR Populus trichocarpa POPTR_0011s16880 N 0.720
XM_002882767.1 Arabidopsis lyrata scaffold_301521.1 N 0.740
rbp28 Schizosaccharomyces pombe SPAC2C4.11c N 0.700
PNO1 Saccharomyces cerevisiae YOR145C N 0.720
28525.m000262 Ricinus communis 28525.m000262 N 0.720
cassava30594.valid.m1 Manihot esculenta cassava30594.valid.m1 N 0.720
cassava7030.valid.m1 Manihot esculenta cassava7030.valid.m1 N 0.700
Chlre2_kg.scaffold_20000177 Chlamydomonas reinhardtii Chlre2_kg.scaffold_20000177 N 0.740
Cucsa.041830 Cucumis sativus Cucsa.041830 N 0.700
Cucsa.201760 Cucumis sativus Cucsa.201760 N 0.700
e_gw1.18.222.1 Chlorella NC64A e_gw1.18.222.1 N 0.700
e_gw1.226.39.1 Physcomitrella patens e_gw1.226.39.1 N 0.700
e_gw1.3.666.1 Neurospora discreta e_gw1.3.666.1 N 0.740
e_gww2.1.865.1 Phanerochaete chrysosporium e_gww2.1.865.1 N 0.700
estExt_fgenesh1_kg.C_140013 Cochliobolus heterostrophus C5 estExt_fgenesh1_kg.C_140013 N 0.700
EFA79428.1 Polysphondylium pallidum EFA79428.1 N 0.720
Medtr3g080390 Medicago truncatula Medtr3g080390 N 0.720
Scas_Contig632.19 Saccharomyces castellii Scas_Contig632.19 N 0.700
MDP0000265633 Malus x domestica MDP0000265633 N 0.720
MDP0000754021 Malus x domestica MDP0000754021 N 0.720
Pa_3_1680 Podospora anserina Pa_3_1680 N 0.720
PNO1 Ashbya gossypii PNO1 N 0.700
ppa009897m Prunus persica ppa009897m N 0.720
ppa011086m Prunus persica ppa011086m N 0.720
SAKL0G03740g Lachancea kluyveri SAKL0G03740g N 0.720
XP_001202155.1 Strongylocentrotus purpuratus XP_001202155.1 N 0.760
XP_001202160.1 Strongylocentrotus purpuratus XP_001202160.1 N 0.760
XP_002162789.1 Hydra magnipapillata XP_002162789.1 N 0.800
XP_791733.2 Strongylocentrotus purpuratus XP_791733.2 N 0.760
XP_798188.2 Strongylocentrotus purpuratus XP_798188.2 N 0.760
ZYRO0D11440g Zygosaccharomyces rouxii ZYRO0D11440g N 0.700
AAH42279 Xenopus laevis AAH42279 N 0.760
AAQ24169 Xenopus laevis AAQ24169 N 0.760
MDP0000136407 Malus x domestica MDP0000136407 N 0.720
MDP0000120063 Malus x domestica MDP0000120063 N 0.720
LjSGA_017760.2 Lotus japonicus LjSGA_017760.2 N 0.720
Skud_Contig1833.8 Saccharomyces kudriavzevii Skud_Contig1833.8 N 0.720
BGIBMGA014064 Bombyx mori BGIBMGA014064 N 0.720
20359_YOR145C Saccharomyces mikatae 20359_YOR145C N 0.706
20872_YOR145C Saccharomyces paradoxus 20872_YOR145C N 0.720
23888_YOR145C Saccharomyces bayanus 23888_YOR145C N 0.720
A7THL8_VANPO Vanderwaltozyma polyspora A7THL8_VANPO N 0.720
Ame_R013855 Ailuropoda melanoleuca Ame_R013855 N 0.760
CAGL0K09460g Candida glabrata CAGL0K09460g N 0.720
Cd36_35296 Candida dubliniensis Cd36_35296 N 0.720
estExt_fgenesh1_pg.C_190237 Phytophthora capsici estExt_fgenesh1_pg.C_190237 N 0.700
fgeneshCV_pg.C_scaffold_11000142 Chlorella vulgaris fgeneshCV_pg.C_scaffold_11000142 N 0.740
Genemark1.5719_g Coccomyxa C 169 Genemark1.5719_g N 0.740
KLLA0C06446g Kluyveromyces lactis KLLA0C06446g N 0.720
KLTH0G02574g Kluyveromyces thermotolerans KLTH0G02574g N 0.720
Kwal_18864 Kluyveromyces waltii Kwal_18864 N 0.720
Q8AVH4 Xenopus laevis Q8AVH4 N 0.760
AMAG_12889 Allomyces macrogynus AMAG_12889 N 0.720
pno1 Dictyostelium discoideum DDB_G0287557 N 0.740
PNO1 Anolis carolinensis ENSACAG00000001218 N 0.780
PNO1_BOVIN Bos taurus ENSBTAG00000010604 N 0.760
PNO1 Canis familiaris ENSCAFG00000003256 N 0.760
ENSCING00000009577 Ciona intestinalis ENSCING00000009577 N 0.740
LOC100389955 Callithrix jacchus ENSCJAG00000006564 N 0.760
ENSCJAG00000022611 Callithrix jacchus ENSCJAG00000022611 N 0.720
PNO1 Cavia porcellus ENSCPOG00000010130 N 0.760
ENSCSAVG00000001303 Ciona savignyi ENSCSAVG00000001303 N 0.740
pno1 Danio rerio ENSDARG00000008502 N 0.760
Pno1 Dipodomys ordii ENSDORG00000006867 N 0.760
LOC100061904 Equus caballus ENSECAG00000011263 N 0.760
PNO1 Erinaceus europaeus ENSEEUG00000009611 N 0.760
PNO1 Homo sapiens ENSG00000115946 N 0.760
PNO1 Gasterosteus aculeatus ENSGACG00000012047 N 0.760
AT3G13230 Arabidopsis thaliana AT3G13230-TAIR-G N 0.740
nasonia_NCBI_hmm120183 Nasonia vitripennis nasonia_NCBI_hmm120183 N 0.740
DGIL_AUG5s4501g8t1 Acyrtosiphon pisum DGIL_AUG5s4501g8t1 N 0.720
AMAG_14219 Allomyces macrogynus AMAG_14219 N 0.720
Bm1_42995 Brugia malayi Bm1_42995 N 0.720
CLUG_01545 Candida lusitaniae CLUG_01545 N 0.720
CPAG_01545 Candida parapsilosis CPAG_01545 N 0.720
CTRG_05813 Candida tropicalis CTRG_05813 N 0.720
DEHA0G05258g Debaryomyces hansenii DEHA0G05258g N 0.720
LELG_05249 Lodderomyces elongisporus LELG_05249 N 0.720
LOAG_05624 Loa loa LOAG_05624 N 0.720
orf19.7618 Candida albicans orf19.7618 N 0.720
PGUG_02960 Candida guilliermondii PGUG_02960 N 0.700
RO3G_00885 Rhizopus oryzae RO3G_00885 N 0.700
RO3G_05288 Rhizopus oryzae RO3G_05288 N 0.700
WUBG_12774 Wuchereria bancrofti WUBG_12774 N 0.720
PK08146.1 Cannabis sativa PK08146.1 N 0.720
amel4_ncbi_hmm14037 Apis mellifera amel4_ncbi_hmm14037 N 0.740
PNO1_CHICK Gallus gallus ENSGALG00000009093 N 0.760
PNO1 Gorilla gorilla ENSGGOG00000009158 N 0.760
PNO1 Loxodonta africana ENSLAFG00000000046 N 0.760
Pno1 Rattus norvegicus ENSRNOG00000005524 N 0.760
PNO1 Sus scrofa ENSSSCG00000008352 N 0.760
PNO1 Taeniopygia guttata ENSTGUG00000002369 N 0.740
PNO1 Tetraodon nigroviridis ENSTNIG00000009825 N 0.780
PNO1 Takifugu rubripes ENSTRUG00000012470 N 0.780
PNO1 Tursiops truncatus ENSTTRG00000014002 N 0.760
PNO1 Vicugna pacos ENSVPAG00000012083 N 0.760
pno1 Xenopus tropicalis ENSXETG00000017349 N 0.760
GA11169-RA Drosophila pseudoobscura FBgn0071224 N 0.706
GH12628 Drosophila grimshawi FBgn0120107 N 0.706
GI11042 Drosophila mojavensis FBgn0133805 N 0.706
GJ15820 Drosophila virilis FBgn0203007 N 0.706
PNO1_IXOSC Ixodes scapularis ISCW023560 N 0.700
NCU07956 Neurospora crassa NCU07956 N 0.740
PHATRDRAFT_9929 Phaeodactylum tricornutum Phatr9929 N 0.700
PNO1 Pteropus vampyrus ENSPVAG00000012695 N 0.760
PNO1 Pan troglodytes ENSPTRG00000011999 N 0.760
ENSPPYG00000012353 Pongo pygmaeus ENSPPYG00000012353 N 0.760
PNO1 Macropus eugenii ENSMEUG00000004504 N 0.760
PNO1 Meleagris gallopavo ENSMGAG00000004514 N 0.760
PNO1 Microcebus murinus ENSMICG00000010897 N 0.760
PNO1 Myotis lucifugus ENSMLUG00000010850 N 0.760
XM_001110046.1 Macaca mulatta ENSMMUG00000003556 N 0.740
Q7YRC8_MACMU Macaca mulatta ENSMMUG00000017461 N 0.760
XM_001095777.1 Macaca mulatta ENSMMUG00000030357 N 0.760
PNO1 Monodelphis domestica ENSMODG00000003567 N 0.760
Pno1 Mus musculus ENSMUSG00000020116 N 0.760
PNO1 Ornithorhynchus anatinus ENSOANG00000008388 N 0.760
ENSOCUG00000006100 Oryctolagus cuniculus ENSOCUG00000006100 N 0.760
ENSOCUG00000022236 Oryctolagus cuniculus ENSOCUG00000022236 N 0.760
PNO1 Ochotona princeps ENSOPRG00000009643 N 0.760
Q6VBQ6_ORYLA Oryzias latipes ENSORLG00000002371 N 0.760
PNO1 Procavia capensis ENSPCAG00000016146 N 0.760
PHUM356890 Pediculus humanus PHUM356890 N 0.740