PCBP3 (Gallus gallus)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 ENSGALG00000013155 T18874_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
Pcbp3
M188_0.6 		Mus musculus UUUYCC RNAcompete
Ray et al.(2013)
RNCMPT00215 		0.963
pcbp2
M211_0.6 		Danio rerio WWUCCC RNAcompete
Ray et al.(2013)
RNCMPT00246 		0.894
PCBP2
M043_0.6 		Homo sapiens CCYYCCH RNAcompete
Ray et al.(2013)
RNCMPT00044 		0.888
Pcbp1
M207_0.6 		Mus musculus CYUUCC RNAcompete
Ray et al.(2013)
RNCMPT00239 		0.851
PCBP1
M177_0.6 		Homo sapiens CCWWHCC RNAcompete
Ray et al.(2013)
RNCMPT00186 		0.851
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSGALP00000021450 KH 15 75
ENSGALP00000021450 KH 99 162
ENSGALP00000021450 KH 246 308
ENSGALP00000021451 KH 14 74
ENSGALP00000021451 KH 98 161
ENSGALP00000021451 KH 281 343
ENSGALP00000021453 KH 15 75
ENSGALP00000021453 KH 99 162
ENSGALP00000021453 KH 243 305

Links

Other KH family RBPs
Other Gallus gallus RBPs

133 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
PCBP1 Homo sapiens ENSG00000169564 D 0.851
Pcbp3 Mus musculus ENSMUSG00000001120 D 0.963
Pcbp1 Mus musculus ENSMUSG00000051695 D 0.851
PCBP2 Homo sapiens ENSG00000197111 D 0.888
pcbp2 Danio rerio ENSDARG00000013184 D 0.894
ENSPPYG00000012328 Pongo pygmaeus ENSPPYG00000012328 I 0.851
PCBP2 Pan troglodytes ENSPTRG00000005018 I 0.888
PCBP1 Pan troglodytes ENSPTRG00000012025 I 0.851
PCBP3 Pan troglodytes ENSPTRG00000014010 I 0.963
PCBP2 Pteropus vampyrus ENSPVAG00000012284 I 0.888
Pcbp3 Rattus norvegicus ENSRNOG00000001245 I 0.963
ENSPPYG00000004581 Pongo pygmaeus ENSPPYG00000004581 I 0.888
PCBP2 Procavia capensis ENSPCAG00000005154 I 0.888
ENSORLG00000012872 Oryzias latipes ENSORLG00000012872 I 0.872
Pcbp2 Mus musculus ENSMUSG00000056851 I 0.888
PCBP3 Oryctolagus cuniculus ENSOCUG00000002696 I 0.963
PCBP1_RABIT Oryctolagus cuniculus ENSOCUG00000003634 I 0.851
ENSOCUG00000022490 Oryctolagus cuniculus ENSOCUG00000022490 I 0.888
PCBP1 Otolemur garnettii ENSOGAG00000008557 I 0.000
PCBP2 Ochotona princeps ENSOPRG00000004680 I 0.888
PCBP3 Oryzias latipes ENSORLG00000000059 I 0.894
ENSORLG00000005176 Oryzias latipes ENSORLG00000005176 I 0.883
ENSMODG00000017748 Monodelphis domestica ENSMODG00000017748 I 0.814
Pcbp1 Rattus norvegicus ENSRNOG00000017708 I 0.851
ENSRNOG00000019487 Rattus norvegicus ENSRNOG00000019487 I 0.772
PCBP2 Tarsius syrichta ENSTSYG00000009771 I 0.840
PCBP3 Tursiops truncatus ENSTTRG00000015075 I 0.963
PCBP2 Tursiops truncatus ENSTTRG00000017174 I 0.888
pcbp3 Xenopus tropicalis ENSXETG00000012658 I 0.894
Ame_R002707 Ailuropoda melanoleuca Ame_R002707 I 0.851
Ame_R011627 Ailuropoda melanoleuca Ame_R011627 I 0.787
AAH41241 Xenopus laevis AAH41241 I 0.894
AAH84195 Xenopus laevis AAH84195 I 0.894
CAB50743 Xenopus laevis CAB50743 I 0.894
PCBP3 Takifugu rubripes ENSTRUG00000013604 I 0.941
ENSTRUG00000011419 Takifugu rubripes ENSTRUG00000011419 I 0.867
D4ADH2_RAT Rattus norvegicus ENSRNOG00000039295 I 0.778
PCBP2 Sus scrofa ENSSSCG00000000274 I 0.888
PCBP2 Tupaia belangeri ENSTBEG00000015592 I 0.707
PCBP3-2 Taeniopygia guttata ENSTGUG00000008158 I 0.995
PCBP1 Taeniopygia guttata ENSTGUG00000016232 I 0.707
PCBP3 Tetraodon nigroviridis ENSTNIG00000010615 I 0.941
PCBP1 Tetraodon nigroviridis ENSTNIG00000012585 I 0.872
PCBP3 Takifugu rubripes ENSTRUG00000006280 I 0.941
ENSTRUG00000009361 Takifugu rubripes ENSTRUG00000009361 I 0.878
CAD29864 Xenopus laevis CAD29864 I 0.894
ENSMODG00000000280 Monodelphis domestica ENSMODG00000000280 I 0.888
ENSACAG00000000783 Anolis carolinensis ENSACAG00000000783 I 0.888
A6MKZ3_CALJA Callithrix jacchus ENSCJAG00000022539 I 0.840
ENSCJAG00000034075 Callithrix jacchus ENSCJAG00000034075 I 0.883
ENSCPOG00000000967 Cavia porcellus ENSCPOG00000000967 I 0.888
PCBP3 Cavia porcellus ENSCPOG00000003648 I 0.963
PCBP1 Cavia porcellus ENSCPOG00000013511 I 0.851
PCBP2 Dasypus novemcinctus ENSDNOG00000008688 I 0.888
Pcbp2 Dipodomys ordii ENSDORG00000001384 I 0.000
LOC100050579 Equus caballus ENSECAG00000002544 I 0.851
LOC100392590 Callithrix jacchus ENSCJAG00000018590 I 0.878
LOC100409398 Callithrix jacchus ENSCJAG00000007694 I 0.824
PCBP1 Callithrix jacchus ENSCJAG00000004017 I 0.824
PCBP3 Anolis carolinensis ENSACAG00000004607 I 0.963
ENSACAG00000009819 Anolis carolinensis ENSACAG00000009819 I 0.995
PCBP1_BOVIN Bos taurus ENSBTAG00000008985 I 0.851
Q3SYT9_BOVIN Bos taurus ENSBTAG00000020757 I 0.888
Q17QV0_BOVIN Bos taurus ENSBTAG00000030775 I 0.952
PCBP2 Canis familiaris ENSCAFG00000006821 I 0.888
PCBP1 Canis familiaris ENSCAFG00000013845 I 0.830
LOC100408015 Callithrix jacchus ENSCJAG00000001903 I 0.963
LOC100050101 Equus caballus ENSECAG00000012413 I 0.963
PCBP2 Equus caballus ENSECAG00000022389 I 0.888
PCBP2 Echinops telfairi ENSETEG00000014741 I 0.804
PCBP2 Macropus eugenii ENSMEUG00000001887 I 0.798
PCBP3 Macropus eugenii ENSMEUG00000012960 I 0.920
PCBP3 Meleagris gallopavo ENSMGAG00000001883 I 0.963
ENSMGAG00000006794 Meleagris gallopavo ENSMGAG00000006794 I 0.952
PCBP1 Microcebus murinus ENSMICG00000002140 I 0.000
PCBP2 Microcebus murinus ENSMICG00000011651 I 0.888
PCBP1 Myotis lucifugus ENSMLUG00000014173 I 0.851
PCBP3 Macaca mulatta ENSMMUG00000003825 I 0.963
ENSLAFG00000013187 Loxodonta africana ENSLAFG00000013187 I 0.888
PCBP1 Gorilla gorilla ENSGGOG00000028130 I 0.851
PCBP2 Gorilla gorilla ENSGGOG00000012613 I 0.888
PCBP3 Homo sapiens ENSG00000183570 I 0.963
PCBP3 Gasterosteus aculeatus ENSGACG00000002266 I 0.941
ENSGACG00000003197 Gasterosteus aculeatus ENSGACG00000003197 I 0.862
ENSGACG00000006681 Gasterosteus aculeatus ENSGACG00000006681 I 0.872
PCBP3 Gasterosteus aculeatus ENSGACG00000014955 I 0.936
PCBP3 Gallus gallus ENSGALG00000004394 I 0.920
PCBP3 Gorilla gorilla ENSGGOG00000003683 I 0.963
PCBP2 Macaca mulatta ENSMMUG00000006608 I 0.888