MEX3B (Sorex araneus)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 ENSSARG00000006007 T19467_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
CG11360
M122_0.6 		Drosophila melanogaster GAGUDW RNAcompete
Ray et al.(2013)
RNCMPT00129 		0.727
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSSARP00000005449 KH 1 41
ENSSARP00000005449 KH 76 135

Links

Other KH family RBPs
Other Sorex araneus RBPs

152 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
CG11360 Drosophila melanogaster FBgn0039920 D 0.727
MEX3B Oryctolagus cuniculus ENSOCUG00000011603 I 0.990
Mex3c Rattus norvegicus ENSRNOG00000015777 I 0.810
D3ZFL6_RAT Rattus norvegicus ENSRNOG00000025142 I 0.990
Mex3d Rattus norvegicus ENSRNOG00000030830 I 0.754
MEX3C Sorex araneus ENSSARG00000006940 I 0.970
MEX3C Tupaia belangeri ENSTBEG00000014438 I 0.970
MEX3D Taeniopygia guttata ENSTGUG00000000201 I 0.779
MEX3B Tetraodon nigroviridis ENSTNIG00000003398 I 0.818
MEX3D Tetraodon nigroviridis ENSTNIG00000015325 I 0.762
MEX3B Takifugu rubripes ENSTRUG00000000367 I 0.961
MEX3D Takifugu rubripes ENSTRUG00000007986 I 0.950
MEX3C Takifugu rubripes ENSTRUG00000011888 I 0.933
MEX3C Tursiops truncatus ENSTTRG00000004570 I 0.810
MEX3D Tursiops truncatus ENSTTRG00000008132 I 0.754
MEX3A Tursiops truncatus ENSTTRG00000013346 I 0.727
MEX3C Pteropus vampyrus ENSPVAG00000015135 I 0.810
MEX3A Pteropus vampyrus ENSPVAG00000010333 I 0.761
MEX3B Pteropus vampyrus ENSPVAG00000000093 I 0.835
ENSOCUG00000012549 Oryctolagus cuniculus ENSOCUG00000012549 I 0.810
ENSOCUG00000014295 Oryctolagus cuniculus ENSOCUG00000014295 I 0.726
MEX3B Otolemur garnettii ENSOGAG00000016362 I 0.950
MEX3A Ochotona princeps ENSOPRG00000002937 I 0.736
MEX3D Ochotona princeps ENSOPRG00000008708 I 0.941
MEX3B Ochotona princeps ENSOPRG00000009604 I 0.835
MEX3C Oryzias latipes ENSORLG00000004985 I 0.818
MEX3C Procavia capensis ENSPCAG00000009258 I 0.818
MEX3D Procavia capensis ENSPCAG00000010972 I 0.931
MEX3B Procavia capensis ENSPCAG00000014150 I 1.000
ENSPPYG00000000729 Pongo pygmaeus ENSPPYG00000000729 I 0.736
ENSPPYG00000006723 Pongo pygmaeus ENSPPYG00000006723 I 0.835
ENSPPYG00000009324 Pongo pygmaeus ENSPPYG00000009324 I 0.754
MEX3B Pan troglodytes ENSPTRG00000007373 I 0.835
MEX3C Pan troglodytes ENSPTRG00000010029 I 0.810
MEX3D Pan troglodytes ENSPTRG00000010208 I 0.754
MEX3C Vicugna pacos ENSVPAG00000003137 I 0.970
mex3c Xenopus tropicalis ENSXETG00000022367 I 0.825
gw.320.9.1 Nematostella vectensis gw.320.9.1 I 0.744
BGIBMGA012436 Bombyx mori BGIBMGA012436 I 0.873
Ame_R004658 Ailuropoda melanoleuca Ame_R004658 I 0.810
Ame_R007174 Ailuropoda melanoleuca Ame_R007174 I 0.835
Ame_R011921 Ailuropoda melanoleuca Ame_R011921 I 0.905
Ame_R015561 Ailuropoda melanoleuca Ame_R015561 I 0.736
XP_001175528.1 Strongylocentrotus purpuratus XP_001175528.1 I 0.760
XP_002168292.1 Hydra magnipapillata XP_002168292.1 I 0.727
XP_786425.2 Strongylocentrotus purpuratus XP_786425.2 I 0.760
A1L3F4 Xenopus laevis A1L3F4 I 0.826
AAI28670 Xenopus laevis AAI28670 I 0.825
AAI30070 Xenopus laevis AAI30070 I 0.826
AAI30114 Xenopus laevis AAI30114 I 0.746
AAI30196 Xenopus laevis AAI30196 I 0.744
AAI33220 Xenopus laevis AAI33220 I 0.746
AAI42552 Xenopus laevis AAI42552 I 0.754
estExt_Genewise1.C_sca_540218 Lottia gigantea estExt_Genewise1.C_sca_540218 I 0.777
estExt_fgenesh2_pg.C_2010087 Branchiostoma floridae estExt_fgenesh2_pg.C_2010087 I 0.826
mex-3 Caenorhabditis elegans F53G12.5 I 0.000
GA10947-RA Drosophila pseudoobscura FBgn0071003 I 0.727
GF20555 Drosophila ananassae FBgn0097561 I 0.719
GG16398 Drosophila erecta FBgn0108630 I 0.727
GH23938 Drosophila grimshawi FBgn0131395 I 0.727
GL18139 Drosophila persimilis FBgn0155742 I 0.727
GD24410 Drosophila simulans FBgn0195748 I 0.727
GJ18673 Drosophila virilis FBgn0205827 I 0.727
GK13594 Drosophila willistoni FBgn0215602 I 0.727
GE14558 Drosophila yakuba FBgn0232157 I 0.727
PHUM418100 Pediculus humanus PHUM418100 I 0.903
SNAPOd2T00016811001 Oikopleura dioica SNAPOd2T00016811001 I 0.000
Aqu1.215178 Amphimedon queenslandica Aqu1.215178 I 0.000
e_gw1.15.409.1 Daphnia pulex e_gw1.15.409.1 I 0.752
e_gw1.312.50.1 Capitella teleta e_gw1.312.50.1 I 0.861
e_gw1.3.1475.1 Trichoplax adhaerens e_gw1.3.1475.1 I 0.873
BAH79688 Xenopus laevis BAH79688 I 0.826
MEX3A Oryctolagus cuniculus ENSOCUG00000005640 I 0.736
CpipJ_CPIJ010634 Culex pipiens CpipJ_CPIJ010634 I 0.000
MEX3D Canis familiaris ENSCAFG00000023712 I 0.931
MEX3C Choloepus hoffmanni ENSCHOG00000004915 I 0.810
ENSCING00000002603 Ciona intestinalis ENSCING00000002603 I 0.785
LOC100410023 Callithrix jacchus ENSCJAG00000001902 I 0.810
LOC100410413 Callithrix jacchus ENSCJAG00000007711 I 0.736
MEX3B Callithrix jacchus ENSCJAG00000008043 I 0.835
ENSCPOG00000008241 Cavia porcellus ENSCPOG00000008241 I 0.828
MEX3C Cavia porcellus ENSCPOG00000009646 I 0.810
MEX3A Cavia porcellus ENSCPOG00000020219 I 0.736
MEX3B Cavia porcellus ENSCPOG00000023663 I 0.754
MEX3B Danio rerio ENSDARG00000058369 I 0.826
MEX3C Danio rerio ENSDARG00000068971 I 0.941
MEX3A Danio rerio ENSDARG00000076638 I 0.736
MEX3C Dasypus novemcinctus ENSDNOG00000006544 I 0.810
MEX3B Dasypus novemcinctus ENSDNOG00000012736 I 0.832
Mex3a Dipodomys ordii ENSDORG00000002921 I 0.736
MEX3B Canis familiaris ENSCAFG00000013759 I 0.990
MEX3C Canis familiaris ENSCAFG00000000162 I 0.817
amel4_ncbi_hmm6985 Apis mellifera amel4_ncbi_hmm6985 I 0.769
nasonia_NCBI_hmm456104 Nasonia vitripennis nasonia_NCBI_hmm456104 I 0.769
AAEL012708 Aedes aegypti AAEL012708 I 0.000
AGAP013259 Anopheles gambiae AGAP013259 I 0.000
CBG05100 Caenorhabditis briggsae CBG05100 I 0.000
CBN20397 Caenorhabditis brenneri CBN20397 I 0.000
CBN24563 Caenorhabditis brenneri CBN24563 I 0.000
CJA18034 Caenorhabditis japonica CJA18034 I 0.000
CPIJ010634 Culex quinquefasciatus CPIJ010634 I 0.000
CRE03823 Caenorhabditis remanei CRE03823 I 0.000
MEX3C Anolis carolinensis ENSACAG00000010265 I 0.961
MEX3B Anolis carolinensis ENSACAG00000011072 I 0.980
Q2YDI4_BOVIN Bos taurus ENSBTAG00000014886 I 0.961
MEX3B Bos taurus ENSBTAG00000016630 I 0.835
MEX3A Bos taurus ENSBTAG00000019158 I 0.736
MEX3D Bos taurus ENSBTAG00000044028 I 0.931
Mex3c Dipodomys ordii ENSDORG00000007962 I 0.970
MEX3B Equus caballus ENSECAG00000013497 I 0.835
MEX3C Equus caballus ENSECAG00000021727 I 0.810
MEX3D Macropus eugenii ENSMEUG00000016404 I 0.770
MEX3D Meleagris gallopavo ENSMGAG00000002325 I 0.951
MEX3A Microcebus murinus ENSMICG00000002233 I 0.000
MEX3C Microcebus murinus ENSMICG00000005815 I 0.970
MEX3C Myotis lucifugus ENSMLUG00000012585 I 0.970
MEX3B Macaca mulatta ENSMMUG00000018639 I 0.835
MEX3A Macaca mulatta ENSMMUG00000022307 I 0.736
MEX3C Macaca mulatta ENSMMUG00000023652 I 0.810
MEX3D Monodelphis domestica ENSMODG00000004116 I 0.770
MEX3C Monodelphis domestica ENSMODG00000011001 I 0.810
MEX3A Monodelphis domestica ENSMODG00000016954 I 0.736
MEX3B Monodelphis domestica ENSMODG00000019387 I 0.990
Mex3c Mus musculus ENSMUSG00000037253 I 0.810
Mex3d Mus musculus ENSMUSG00000048696 I 0.754
Mex3b Mus musculus ENSMUSG00000057706 I 0.990
MEX3C Ornithorhynchus anatinus ENSOANG00000008116 I 0.961
MEX3C Macropus eugenii ENSMEUG00000015929 I 0.970
MEX3B Macropus eugenii ENSMEUG00000002402 I 0.826
MEX3C Erinaceus europaeus ENSEEUG00000010864 I 0.970
MEX3C Echinops telfairi ENSETEG00000003647 I 0.980
MEX3D Felis catus ENSFCAG00000002615 I 0.941
MEX3C Homo sapiens ENSG00000176624 I 0.810
MEX3D Homo sapiens ENSG00000181588 I 0.754
MEX3B Homo sapiens ENSG00000183496 I 0.835
MEX3C Gasterosteus aculeatus ENSGACG00000007490 I 0.802
MEX3B Gasterosteus aculeatus ENSGACG00000012530 I 0.793
MEX3D Gasterosteus aculeatus ENSGACG00000015299 I 0.754
MEX3D Gallus gallus ENSGALG00000001106 I 0.951
MEX3B Gorilla gorilla ENSGGOG00000000597 I 0.835
MEX3D Gorilla gorilla ENSGGOG00000001083 I 0.754
MEX3A Gorilla gorilla ENSGGOG00000004513 I 0.736
MEX3C Gorilla gorilla ENSGGOG00000014875 I 0.810
MEX3B Loxodonta africana ENSLAFG00000006027 I 0.990
MEX3C Loxodonta africana ENSLAFG00000027818 I 0.810
MEX3D Ornithorhynchus anatinus ENSOANG00000011764 I 0.738