PSPC1 (Taeniopygia guttata)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSTGUG00000011295 T41959_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
SFPQ
M308_0.6 		Homo sapiens Sequence logo not available UGGAGAGGAAC SELEX
Cook et al.(2011)
489_12403470 		0.759
SFPQ
M168_0.6 		Homo sapiens KURRUKK RNAcompete
Ray et al.(2013)
RNCMPT00177 		0.759
NONO
M309_0.6 		Homo sapiens Sequence logo not available GAGAGGAAC SELEX
Cook et al.(2011)
490_12403470 		0.705
NONO
M307_0.6 		Homo sapiens AGGGA SELEX
Cook et al.(2011)
488_9001221 		0.705
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSTGUP00000011650 RRM 27 91
ENSTGUP00000011650 RRM 101 166

Links

Other RRM family RBPs
Other Taeniopygia guttata RBPs

100 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
ENSCING00000008519 Ciona intestinalis ENSCING00000008519 N 0.000