mgf016066m (Mimulus guttatus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 mgf016066m T53752_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
mgf016066m RRM 46 114
mgf016066m RRM 133 203

Links

Other RRM family RBPs
Other Mimulus guttatus RBPs

27 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
PK13311.1 Cannabis sativa PK13311.1 N 0.779
Glyma05g09040.1 Glycine max Glyma05g09040.1 N 0.771
Glyma16g07660.1 Glycine max Glyma16g07660.1 N 0.779
Glyma19g00530.1 Glycine max Glyma19g00530.1 N 0.779
Glyma19g10300.1 Glycine max Glyma19g10300.1 N 0.779
mgf019396m Mimulus guttatus mgf019396m N 0.707
chr2.LjT32G18.130.nc Lotus japonicus chr2.LjT32G18.130.nc N 0.771
MDP0000202850 Malus x domestica MDP0000202850 N 0.707
MDP0000270712 Malus x domestica MDP0000270712 N 0.736
MDP0000303054 Malus x domestica MDP0000303054 N 0.736
MDP0000303178 Malus x domestica MDP0000303178 N 0.707
ppa006963m Prunus persica ppa006963m N 0.700
Cucsa.340040 Cucumis sativus Cucsa.340040 N 0.786
Cucsa.240780 Cucumis sativus Cucsa.240780 N 0.714
cassava897.valid.m1 Manihot esculenta cassava897.valid.m1 N 0.757
AT5G40490 Arabidopsis thaliana AT5G40490-TAIR-G N 0.757
XM_002870653.1 Arabidopsis lyrata fgenesh2_kg.7__3369__AT5G40490.1 N 0.757
GSVIVG00012784001 Vitis vinifera GSVIVG00012784001 N 0.736
GSVIVG00014729001 Vitis vinifera GSVIVG00014729001 N 0.721
GSVIVG00032402001 Vitis vinifera GSVIVG00032402001 N 0.764
B9GI65_POPTR Populus trichocarpa POPTR_0001s35360 N 0.750
B9GFZ7_POPTR Populus trichocarpa POPTR_0001s37920 N 0.707
29629.m001425 Ricinus communis 29629.m001425 N 0.736
29917.m002004 Ricinus communis 29917.m002004 N 0.764
cassava24310.valid.m1 Manihot esculenta cassava24310.valid.m1 N 0.700
cassava7031.valid.m1 Manihot esculenta cassava7031.valid.m1 N 0.714
ppa007179m Prunus persica ppa007179m N 0.771