MDP0000270712 (Malus x domestica)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 MDP0000270712 T57542_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
MDP0000270712 RRM 48 116
MDP0000270712 RRM 136 206

Links

Other RRM family RBPs
Other Malus x domestica RBPs

31 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
MDP0000303054 Malus x domestica MDP0000303054 N 1.000
ppa007179m Prunus persica ppa007179m N 0.907
GSVIVG00032402001 Vitis vinifera GSVIVG00032402001 N 0.843
MDP0000303178 Malus x domestica MDP0000303178 N 0.843
PK13311.1 Cannabis sativa PK13311.1 N 0.843
29917.m002004 Ricinus communis 29917.m002004 N 0.836
B9GI65_POPTR Populus trichocarpa POPTR_0001s35360 N 0.807
Glyma19g10300.1 Glycine max Glyma19g10300.1 N 0.800
Glyma16g07660.1 Glycine max Glyma16g07660.1 N 0.800
Cucsa.340040 Cucumis sativus Cucsa.340040 N 0.793
Glyma19g00530.1 Glycine max Glyma19g00530.1 N 0.793
Glyma05g09040.1 Glycine max Glyma05g09040.1 N 0.793
cassava897.valid.m1 Manihot esculenta cassava897.valid.m1 N 0.793
chr2.LjT32G18.130.nc Lotus japonicus chr2.LjT32G18.130.nc N 0.779
XM_002870653.1 Arabidopsis lyrata fgenesh2_kg.7__3369__AT5G40490.1 N 0.743
AT5G40490 Arabidopsis thaliana AT5G40490-TAIR-G N 0.743
mgf016066m Mimulus guttatus mgf016066m N 0.736
ppa006963m Prunus persica ppa006963m N 0.729
GSVIVG00012784001 Vitis vinifera GSVIVG00012784001 N 0.721
29629.m001425 Ricinus communis 29629.m001425 N 0.721
cassava7031.valid.m1 Manihot esculenta cassava7031.valid.m1 N 0.721
GSVIVG00014729001 Vitis vinifera GSVIVG00014729001 N 0.714
MDP0000202850 Malus x domestica MDP0000202850 N 0.714
MDP0000191633 Malus x domestica MDP0000191633 N 0.714
Cucsa.240780 Cucumis sativus Cucsa.240780 N 0.714
MDP0000220851 Malus x domestica MDP0000220851 N 0.707
B9GFZ7_POPTR Populus trichocarpa POPTR_0001s37920 N 0.707
PK22392.1 Cannabis sativa PK22392.1 N 0.707
AT3G13224 Arabidopsis thaliana AT3G13224-TAIR-G N 0.707
ppa007812m Prunus persica ppa007812m N 0.700
XM_002882764.1 Arabidopsis lyrata fgenesh2_kg.3__1405__AT3G13224.1 N 0.700