PHUM156720 (Pediculus humanus)
CSD

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00313 (CSD) IPR002059 PHUM156720 T17134_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
YB-1
M111_0.6 		Homo sapiens AACAUCD RNAcompete
Ray et al.(2013)
RNCMPT00116 		0.831
YB-1
M081_0.6 		Homo sapiens AACAUC RNAcompete
Ray et al.(2013)
RNCMPT00083 		0.831
ybx2-a
M260_0.6 		Xenopus laevis GCCANACCAYCGC SELEX
Cook et al.(2011)
130_11376140 		0.792
ybx2-a
M254_0.6 		Xenopus laevis KAACAUCU SELEX
Cook et al.(2011)
115_7499328 		0.792
ybx2-a
M250_0.6 		Xenopus laevis UAACAUC SELEX
Cook et al.(2011)
114_7499328 		0.792
YBX2
M082_0.6 		Homo sapiens AACAWCD RNAcompete
Ray et al.(2013)
RNCMPT00084 		0.764
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
PHUM156720-PA CSD 23 93

Links

Other CSD family RBPs
Other Pediculus humanus RBPs

181 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AAEL006675 Aedes aegypti AAEL006675 I 0.000
AAEL008516 Aedes aegypti AAEL008516 I 0.000
AAH43735 Xenopus laevis AAH43735 I 0.000
AAH56021 Xenopus laevis AAH56021 I 0.000
DGIL_AUG5s1005g4t1 Acyrtosiphon pisum DGIL_AUG5s1005g4t1 I 0.000
elavl4 Xenopus tropicalis ENSXETG00000008680 I 0.000
ELAVL4 Takifugu rubripes ENSTRUG00000000523 I 0.000
ELAVL4 Oryzias latipes ENSORLG00000017130 I 0.000
fne Drosophila yakuba FBgn0067971 I 0.000
fne Drosophila melanogaster FBgn0086675 D 0.000
GA22283-RA Drosophila pseudoobscura FBgn0243690 I 0.000
GF21392 Drosophila ananassae FBgn0098394 I 0.000
GG17743 Drosophila erecta FBgn0109965 I 0.000
GH24423 Drosophila grimshawi FBgn0131879 I 0.000
GI16282 Drosophila mojavensis FBgn0139031 I 0.000
GJ16518 Drosophila virilis FBgn0203702 I 0.000
GK25647 Drosophila willistoni FBgn0227606 I 0.000
GL22975 Drosophila persimilis FBgn0160565 I 0.000
GM11591 Drosophila sechellia FBgn0166534 I 0.000
PHUM065370 Pediculus humanus PHUM065370 I 0.000