Q5ZHM3_CHICK (Gallus gallus)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 ENSGALG00000009177 T18869_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
FXR1
M152_0.6 		Homo sapiens AYGACR RNAcompete
Ray et al.(2013)
RNCMPT00161 		0.794
FXR2
M020_0.6 		Homo sapiens DGACRRR RNAcompete
Ray et al.(2013)
RNCMPT00020 		0.748
FMR1
M305_0.6 		Homo sapiens Sequence logo not available KAGCGRCUGG SELEX
Cook et al.(2011)
471_15805463.1 		0.713
FMR1
M304_0.6 		Homo sapiens Sequence logo not available GGGCKAAGGARK SELEX
Cook et al.(2011)
471_15805463 		0.713
FMR1
M016_0.6 		Homo sapiens KGACARG RNAcompete
Ray et al.(2013)
RNCMPT00016 		0.713
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSGALP00000014935 KH 220 279
ENSGALP00000014935 KH 283 351

Links

Other KH family RBPs
Other Gallus gallus RBPs

113 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AAC59682 Xenopus laevis AAC59682 I 0.763
AAC59683 Xenopus laevis AAC59683 I 0.938
AAH43638 Xenopus laevis AAH43638 I 0.771
AAH73457 Xenopus laevis AAH73457 I 0.771
AAI12953 Xenopus laevis AAI12953 I 0.946
AAI31885 Xenopus laevis AAI31885 I 0.771
AAI70204 Xenopus laevis AAI70204 I 0.946
AAY79165 Xenopus laevis AAY79165 I 0.771
AAY79166 Xenopus laevis AAY79166 I 0.771
amel4_ncbi_hmm37854 Apis mellifera amel4_ncbi_hmm37854 I 0.705
Ame_R012967 Ailuropoda melanoleuca Ame_R012967 I 0.756
Ame_R018977 Ailuropoda melanoleuca Ame_R018977 I 0.794
ENSPPYG00000007930 Pongo pygmaeus ENSPPYG00000007930 I 0.748
ENSPPYG00000014327 Pongo pygmaeus ENSPPYG00000014327 I 0.794
ENSPPYG00000020797 Pongo pygmaeus ENSPPYG00000020797 I 0.713
FMR1 Gasterosteus aculeatus ENSGACG00000018742 I 0.815
FMR1 Gorilla gorilla ENSGGOG00000010373 N 0.782
FMR1 Pan troglodytes ENSPTRG00000022349 I 0.770
FMR1 Loxodonta africana ENSLAFG00000013592 N 0.759
FMR1 Meleagris gallopavo ENSMGAG00000008270 N 0.761
FMR1 Procavia capensis ENSPCAG00000011936 N 0.746
FMR1 Oryzias latipes ENSORLG00000009094 I 0.841
FMR1 Macaca mulatta ENSMMUG00000015814 I 0.770
FMR1 Ochotona princeps ENSOPRG00000012759 N 0.782
Fmr1 Mus musculus ENSMUSG00000000838 I 0.757
FMR1 Otolemur garnettii ENSOGAG00000013061 N 0.744
FMR1 Ornithorhynchus anatinus ENSOANG00000001097 I 0.800
FMR1 Oryctolagus cuniculus ENSOCUG00000014621 N 0.769
FMR1 Spermophilus tridecemlineatus ENSSTOG00000003260 N 0.759
FMR1 Taeniopygia guttata ENSTGUG00000004735 I 0.750
FMR1 Homo sapiens ENSG00000102081 D 0.770
FMR1 Canis familiaris ENSCAFG00000019085 I 0.938
FMR1 Cavia porcellus ENSCPOG00000003723 N 0.748
fmr1 Xenopus tropicalis ENSXETG00000019647 I 0.946
fmr1 Danio rerio ENSDARG00000037433 I 0.811
FMR1 Anolis carolinensis ENSACAG00000007899 N 0.746
Fmr1 Dipodomys ordii ENSDORG00000012501 N 0.780
FMR1 Tursiops truncatus ENSTTRG00000000613 I 0.722
FMR1 Takifugu rubripes ENSTRUG00000005362 N 0.750
FMR1 Tetraodon nigroviridis ENSTNIG00000010121 N 0.780
FMR1 Sorex araneus ENSSARG00000003475 N 0.792
FMR1_RAT Rattus norvegicus ENSRNOG00000011900 I 0.736
FXR1 Tarsius syrichta ENSTSYG00000001610 I 0.794
FXR1 Sus scrofa ENSSSCG00000011769 I 0.786
FXR1 Oryctolagus cuniculus ENSOCUG00000023518 I 0.794
FXR1 Tetraodon nigroviridis ENSTNIG00000003790 I 0.725
FXR1 Ochotona princeps ENSOPRG00000009223 I 0.763
FXR1 Taeniopygia guttata ENSTGUG00000010560 I 0.794
fxr1 Xenopus tropicalis ENSXETG00000019441 I 0.786
FXR1 Vicugna pacos ENSVPAG00000003384 I 0.794
FXR1 Oryzias latipes ENSORLG00000011787 I 0.725
FXR1 Pteropus vampyrus ENSPVAG00000002823 I 0.802
FXR1 Takifugu rubripes ENSTRUG00000003486 I 0.733
FXR1 Tursiops truncatus ENSTTRG00000014698 I 0.794
FXR1 Meleagris gallopavo ENSMGAG00000009602 I 0.802
FXR1 Callithrix jacchus ENSCJAG00000012802 I 0.794
FXR1 Cavia porcellus ENSCPOG00000010418 I 0.794
FXR1 Loxodonta africana ENSLAFG00000001908 I 0.794
fxr1 Danio rerio ENSDARG00000022968 I 0.740
FXR1 Gorilla gorilla ENSGGOG00000009957 I 0.794
FXR1 Equus caballus ENSECAG00000007560 I 0.794
FXR1 Gasterosteus aculeatus ENSGACG00000006052 I 0.748
FXR1 Erinaceus europaeus ENSEEUG00000006823 I 0.786
FXR1 Homo sapiens ENSG00000114416 D 0.794
FXR1 Echinops telfairi ENSETEG00000006891 I 0.794
FXR1 Pan troglodytes ENSPTRG00000015656 I 0.794
FXR1 Monodelphis domestica ENSMODG00000021294 I 0.786
FXR1 Myotis lucifugus ENSMLUG00000006840 I 0.794
FXR1 Ornithorhynchus anatinus ENSOANG00000011045 I 0.786
FXR1 Macaca mulatta ENSMMUG00000012105 I 0.794
Fxr1 Mus musculus ENSMUSG00000027680 I 0.786
FXR1 Canis familiaris ENSCAFG00000011582 I 0.794
FXR1 Anolis carolinensis ENSACAG00000003918 I 0.786
FXR1_BOVIN Bos taurus ENSBTAG00000016457 I 0.794
FXR2 Erinaceus europaeus ENSEEUG00000013410 I 0.748
FXR2 Anolis carolinensis ENSACAG00000000561 I 0.748
FXR2 Takifugu rubripes ENSTRUG00000010696 I 0.723
FXR2 Canis familiaris ENSCAFG00000016685 I 0.756
FXR2 Tursiops truncatus ENSTTRG00000010231 I 0.748
FXR2 Bos taurus ENSBTAG00000005462 I 0.748
FXR2 Dasypus novemcinctus ENSDNOG00000001047 I 0.733
FXR2 Vicugna pacos ENSVPAG00000000147 I 0.748
FXR2 Cavia porcellus ENSCPOG00000023303 I 0.748
FXR2 Callithrix jacchus ENSCJAG00000015063 I 0.748
FXR2 Tetraodon nigroviridis ENSTNIG00000005118 I 0.723
FXR2 Echinops telfairi ENSETEG00000018613 I 0.748
FXR2 Pan troglodytes ENSPTRG00000008698 I 0.748
FXR2 Oryctolagus cuniculus ENSOCUG00000010393 I 0.748
FXR2 Microcebus murinus ENSMICG00000014799 I 0.748
FXR2 Procavia capensis ENSPCAG00000013184 I 0.740
FXR2 Oryzias latipes ENSORLG00000011571 I 0.769
FXR2 Macaca mulatta ENSMMUG00000013510 I 0.748
FXR2 Ochotona princeps ENSOPRG00000017108 I 0.740
FXR2 Monodelphis domestica ENSMODG00000007179 I 0.748
Fxr2 Mus musculus ENSMUSG00000018765 I 0.748
FXR2 Myotis lucifugus ENSMLUG00000003438 I 0.718
FXR2 Loxodonta africana ENSLAFG00000001114 I 0.740
FXR2 Tupaia belangeri ENSTBEG00000002514 I 0.748
FXR2 Homo sapiens ENSG00000129245 D 0.748
FXR2 Felis catus ENSFCAG00000009620 I 0.748
FXR2 Spermophilus tridecemlineatus ENSSTOG00000005657 I 0.748
FXR2 Sus scrofa ENSSSCG00000017953 I 0.748
Fxr2 Rattus norvegicus ENSRNOG00000011876 I 0.748
FXR2 Pteropus vampyrus ENSPVAG00000016306 I 0.748
LOC100147323 Equus caballus ENSECAG00000007051 I 0.748
LOC100414871 Callithrix jacchus ENSCJAG00000003925 I 0.776
nasonia_NCBI_hmm462784 Nasonia vitripennis nasonia_NCBI_hmm462784 I 0.712
P51113 Xenopus laevis P51113 I 0.938
P51115 Xenopus laevis P51115 I 0.771
Q0II33_BOVIN Bos taurus ENSBTAG00000012552 N 0.766
Q2KHP9 Xenopus laevis Q2KHP9 I 0.946
Q5F3S6_CHICK Gallus gallus ENSGALG00000008864 I 0.802
Q7ZTQ5 Xenopus laevis Q7ZTQ5 I 0.771