Ame_R007160 (Ailuropoda melanoleuca)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 Ame_R007160 T21584_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
Pcbp3
M188_0.6 		Mus musculus UUUYCC RNAcompete
Ray et al.(2013)
RNCMPT00215 		0.910
pcbp2
M211_0.6 		Danio rerio WWUCCC RNAcompete
Ray et al.(2013)
RNCMPT00246 		0.793
PCBP2
M043_0.6 		Homo sapiens CCYYCCH RNAcompete
Ray et al.(2013)
RNCMPT00044 		0.793
PCBP1
M177_0.6 		Homo sapiens CCWWHCC RNAcompete
Ray et al.(2013)
RNCMPT00186 		0.771
Pcbp1
M207_0.6 		Mus musculus CYUUCC RNAcompete
Ray et al.(2013)
RNCMPT00239 		0.771
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
Ame_R007160 KH 4 48
Ame_R007160 KH 72 135
Ame_R007160 KH 258 320

Links

Other KH family RBPs
Other Ailuropoda melanoleuca RBPs

97 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
A6MKZ3_CALJA Callithrix jacchus ENSCJAG00000022539 I 0.766
AAH41241 Xenopus laevis AAH41241 I 0.787
AAH84195 Xenopus laevis AAH84195 I 0.787
Ame_R002707 Ailuropoda melanoleuca Ame_R002707 I 0.771
CAB50743 Xenopus laevis CAB50743 I 0.787
CAD29864 Xenopus laevis CAD29864 I 0.787
ENSACAG00000000783 Anolis carolinensis ENSACAG00000000783 I 0.793
ENSCJAG00000034075 Callithrix jacchus ENSCJAG00000034075 I 0.787
ENSCPOG00000000967 Cavia porcellus ENSCPOG00000000967 I 0.793
ENSGACG00000003197 Gasterosteus aculeatus ENSGACG00000003197 I 0.771
ENSGACG00000006681 Gasterosteus aculeatus ENSGACG00000006681 I 0.771
ENSLAFG00000013187 Loxodonta africana ENSLAFG00000013187 I 0.793
ENSMODG00000000280 Monodelphis domestica ENSMODG00000000280 I 0.793
ENSOCUG00000022490 Oryctolagus cuniculus ENSOCUG00000022490 I 0.793
ENSORLG00000005176 Oryzias latipes ENSORLG00000005176 I 0.777
ENSORLG00000012872 Oryzias latipes ENSORLG00000012872 I 0.766
ENSPPYG00000004581 Pongo pygmaeus ENSPPYG00000004581 I 0.793
ENSPPYG00000012328 Pongo pygmaeus ENSPPYG00000012328 I 0.771
ENSTRUG00000009361 Takifugu rubripes ENSTRUG00000009361 I 0.771
ENSTRUG00000011419 Takifugu rubripes ENSTRUG00000011419 I 0.781
LOC100050579 Equus caballus ENSECAG00000002544 I 0.771
LOC100392590 Callithrix jacchus ENSCJAG00000018590 I 0.820
LOC100409398 Callithrix jacchus ENSCJAG00000007694 I 0.739
PCBP1 Pan troglodytes ENSPTRG00000012025 I 0.771
PCBP1 Tetraodon nigroviridis ENSTNIG00000012585 I 0.766
Pcbp1 Mus musculus ENSMUSG00000051695 D 0.771
Pcbp1 Rattus norvegicus ENSRNOG00000017708 I 0.771
PCBP1 Myotis lucifugus ENSMLUG00000014173 I 0.771
PCBP1 Homo sapiens ENSG00000169564 D 0.771
PCBP1 Cavia porcellus ENSCPOG00000013511 I 0.771
PCBP1 Callithrix jacchus ENSCJAG00000004017 I 0.745
PCBP1 Gorilla gorilla ENSGGOG00000028130 I 0.771
PCBP1 Microcebus murinus ENSMICG00000002140 I 0.000
PCBP1 Canis familiaris ENSCAFG00000013845 I 0.750
PCBP1_BOVIN Bos taurus ENSBTAG00000008985 I 0.771
PCBP1_RABIT Oryctolagus cuniculus ENSOCUG00000003634 I 0.771
PCBP2 Macaca mulatta ENSMMUG00000006608 I 0.814
PCBP2 Tarsius syrichta ENSTSYG00000009771 I 0.832
PCBP2 Canis familiaris ENSCAFG00000006821 I 0.793
pcbp2 Danio rerio ENSDARG00000013184 D 0.793
PCBP2 Sus scrofa ENSSSCG00000000274 I 0.793
PCBP2 Dasypus novemcinctus ENSDNOG00000008688 I 0.793
PCBP2 Pteropus vampyrus ENSPVAG00000012284 I 0.793
PCBP2 Myotis lucifugus ENSMLUG00000009971 I 0.000
PCBP2 Microcebus murinus ENSMICG00000011651 I 0.793
Pcbp2 Mus musculus ENSMUSG00000056851 I 0.793
PCBP2 Ochotona princeps ENSOPRG00000004680 I 0.793
PCBP2 Gorilla gorilla ENSGGOG00000012613 I 0.793
PCBP2 Procavia capensis ENSPCAG00000005154 I 0.793
PCBP2 Homo sapiens ENSG00000197111 D 0.831
PCBP2 Pan troglodytes ENSPTRG00000005018 I 0.793
PCBP2 Equus caballus ENSECAG00000022389 I 0.793
PCBP2 Tursiops truncatus ENSTTRG00000017174 I 0.793
pcbp3 Xenopus tropicalis ENSXETG00000012658 I 0.787
Q3SYT9_BOVIN Bos taurus ENSBTAG00000020757 I 0.793