P52299 (Xenopus laevis)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 P52299 T59721_0.6 Xenbase (2010-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
P52299 RRM 39 109

Links

Other RRM family RBPs
Other Xenopus laevis RBPs

134 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
2118330B Xenopus laevis 2118330B N 0.972
91084 Helobdella robusta 91084 N 0.817
AAH72902 Xenopus laevis AAH72902 N 1.000
amel4_ncbi_hmm3188 Apis mellifera amel4_ncbi_hmm3188 N 0.817
Ame_R004608 Ailuropoda melanoleuca Ame_R004608 N 0.873
Aqu1.228507 Amphimedon queenslandica Aqu1.228507 N 0.732
B5G279_TAEGU Taeniopygia guttata ENSTGUG00000007323 N 0.915
BGIBMGA007585 Bombyx mori BGIBMGA007585 N 0.761
Bm1_02935 Brugia malayi Bm1_02935 N 0.761
CAA59259 Xenopus laevis CAA59259 N 0.972
Cbp20 Drosophila melanogaster FBgn0022943 N 0.817
CpipJ_CPIJ003555 Culex pipiens CpipJ_CPIJ003555 N 0.831
DGIL_AUG5s12516g4t1 Acyrtosiphon pisum DGIL_AUG5s12516g4t1 N 0.789
DGIL_AUG5s15103g4t1 Acyrtosiphon pisum DGIL_AUG5s15103g4t1 N 0.761
EAT82863.2 Phaeosphaeria nodorum EAT82863.2 N 0.718
ENSACAG00000015128 Anolis carolinensis ENSACAG00000015128 N 0.887
ENSCHOG00000005967 Choloepus hoffmanni ENSCHOG00000005967 N 0.859
ENSCING00000016926 Ciona intestinalis ENSCING00000016926 N 0.789
ENSCSAVG00000005823 Ciona savignyi ENSCSAVG00000005823 N 0.761
ENSMEUG00000004730 Macropus eugenii ENSMEUG00000004730 N 0.873
ENSMEUG00000008126 Macropus eugenii ENSMEUG00000008126 N 0.887
ENSMGAG00000002257 Meleagris gallopavo ENSMGAG00000002257 N 0.930
ENSMGAG00000006728 Meleagris gallopavo ENSMGAG00000006728 N 0.873
ENSOCUG00000014372 Oryctolagus cuniculus ENSOCUG00000014372 N 0.873
ENSOPRG00000007634 Ochotona princeps ENSOPRG00000007634 N 0.873
ENSPPYG00000014449 Pongo pygmaeus ENSPPYG00000014449 N 0.873
ENSSSCG00000011835 Sus scrofa ENSSSCG00000011835 N 0.873
ENSSSCG00000011840 Sus scrofa ENSSSCG00000011840 N 0.873
ENSSTOG00000001584 Spermophilus tridecemlineatus ENSSTOG00000001584 N 0.887
estExt_fgenesh1_kg.C_1730002 Daphnia pulex estExt_fgenesh1_kg.C_1730002 N 0.789
estExt_Genewise1.C_10147 Cochliobolus heterostrophus C5 estExt_Genewise1.C_10147 N 0.718
estExt_Genewise1.C_5160046 Capitella teleta estExt_Genewise1.C_5160046 N 0.831
estExt_Genewise1.C_sca_180152 Lottia gigantea estExt_Genewise1.C_sca_180152 N 0.803
estExt_gwp.C_920142 Nematostella vectensis estExt_gwp.C_920142 N 0.761
e_gw1.3.1174.1 Thielavia terrestris e_gw1.3.1174.1 N 0.704
GA11577-RA Drosophila pseudoobscura FBgn0071628 N 0.817
GD19204 Drosophila simulans FBgn0190709 N 0.817
GE25514 Drosophila yakuba FBgn0242580 N 0.817
GF16759 Drosophila ananassae FBgn0093780 N 0.845
GG22670 Drosophila erecta FBgn0114835 N 0.831
GH15101 Drosophila grimshawi FBgn0122576 N 0.845
GI23717 Drosophila mojavensis FBgn0146442 N 0.845
GJ18756 Drosophila virilis FBgn0205908 N 0.803
GJ23276 Drosophila virilis FBgn0210378 N 0.845
GK11244 Drosophila willistoni FBgn0213255 N 0.831
GL12592 Drosophila persimilis FBgn0150198 N 0.817
GLRG_00177 Colletotrichum graminicola GLRG_00177 N 0.000
GM15280 Drosophila sechellia FBgn0170200 N 0.817
gw.81.90.1 Branchiostoma floridae gw.81.90.1 N 0.775
gw.93.114.1 Branchiostoma floridae gw.93.114.1 N 0.775
LOAG_03270 Loa loa LOAG_03270 N 0.775
LOC100020122 Monodelphis domestica ENSMODG00000024608 N 0.859
LOC100404338 Callithrix jacchus ENSCJAG00000013735 N 0.873
MGG_06296 Magnaporthe oryzae MGG_06296 N 0.000
Minc02990 Meloidogyne incognita Minc02990 N 0.000
Minc06129 Meloidogyne incognita Minc06129 N 0.000
nasonia_NCBI_hmm134534 Nasonia vitripennis nasonia_NCBI_hmm134534 N 0.789
nasonia_NCBI_hmm1532803 Nasonia vitripennis nasonia_NCBI_hmm1532803 N 0.831
NCBP2 Equus caballus ENSECAG00000016153 N 0.873
NCBP2 Homo sapiens ENSG00000114503 N 0.873
NCBP2 Gasterosteus aculeatus ENSGACG00000006238 N 0.873
NCBP2 Canis familiaris ENSCAFG00000013100 N 0.873
ncbp2 Xenopus tropicalis ENSXETG00000019384 N 0.944
NCBP2 Gallus gallus ENSGALG00000006843 N 0.873
NCBP2 Macaca mulatta ENSMMUG00000007825 N 0.873
NCBP2 Myotis lucifugus ENSMLUG00000017500 N 0.873
NCBP2 Loxodonta africana ENSLAFG00000006372 N 0.859
NCBP2 Microcebus murinus ENSMICG00000003162 N 0.873
NCBP2 Cavia porcellus ENSCPOG00000002976 N 0.873
ncbp2 Danio rerio ENSDARG00000014898 N 0.873
Ncbp2 Mus musculus ENSMUSG00000022774 N 0.873
NCBP2 Otolemur garnettii ENSOGAG00000005009 N 0.873
NCBP2 Pteropus vampyrus ENSPVAG00000017273 N 0.859
NCBP2 Oryzias latipes ENSORLG00000011235 N 0.873
NCBP2 Sorex araneus ENSSARG00000014294 N 0.775
NCBP2 Oryctolagus cuniculus ENSOCUG00000006738 N 0.887
NCBP2 Procavia capensis ENSPCAG00000003219 N 0.873
NCBP2 Tupaia belangeri ENSTBEG00000015222 N 0.873
NCBP2 Taeniopygia guttata ENSTGUG00000008864 N 0.859
NCBP2 Vicugna pacos ENSVPAG00000010369 N 0.859
NCBP2 Tursiops truncatus ENSTTRG00000013908 N 0.873
NCBP2 Takifugu rubripes ENSTRUG00000018355 N 0.915
NCBP2 Tetraodon nigroviridis ENSTNIG00000006065 N 0.901
NCBP2 Pan troglodytes ENSPTRG00000015789 N 0.873
NCBP2L Sus scrofa ENSSSCG00000012562 N 0.761
NCBP2L Loxodonta africana ENSLAFG00000027581 N 0.789
NCBP2L Canis familiaris ENSCAFG00000017990 N 0.732
NCBP2_AEDAE Aedes aegypti AAEL006135 N 0.845
NCBP2_ANOGA Anopheles gambiae AGAP002547 N 0.859
NCBP2_BOVIN Bos taurus ENSBTAG00000008873 N 0.873
NCBP2_CHICK Gallus gallus ENSGALG00000005753 N 0.930
NCBP2_CULQU Culex quinquefasciatus CPIJ003555 N 0.831
NCBP2_IXOSC Ixodes scapularis ISCW017479 N 0.761
PHUM535920 Pediculus humanus PHUM535920 N 0.803
Pigz Rattus norvegicus ENSRNOG00000001746 N 0.873
Ppa-ncbp-2 Pristionchus pacificus PPA17381 N 0.704
PTRG_00402 Pyrenophora tritici repentis PTRG_00402 N 0.718
Sjc_0008080 Schistosoma japonicum Sjc_0008080 N 0.704
SNAPOd2T00014922001 Oikopleura dioica SNAPOd2T00014922001 N 0.000
SNOG_09598 Stagonospora nodorum SNOG_09598 N 0.718
SPPG_00516 Spizellomyces punctatus SPPG_00516 N 0.746
WUBG_16568 Wuchereria bancrofti WUBG_16568 N 0.775
XM_001367531.1 Monodelphis domestica ENSMODG00000024607 N 0.859
XM_001371285.1 Monodelphis domestica ENSMODG00000023276 N 0.887
XM_001373408.1 Monodelphis domestica ENSMODG00000015908 N 0.887
XP_001187788.1 Strongylocentrotus purpuratus XP_001187788.1 N 0.704
XP_002160076.1 Hydra magnipapillata XP_002160076.1 N 0.803
XP_002166119.1 Hydra magnipapillata XP_002166119.1 N 0.817
XP_802051.1 Strongylocentrotus purpuratus XP_802051.1 N 0.704