CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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TEQG_01370
(
Trichophyton equinum
)
S1
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00575 (S1)
IPR003029
TEQG_01370
T60037_0.6
Broad (2011-Oct-27)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
eIF-2alpha
M231_0.6
Drosophila melanogaster
WGCAUG
RNAcompete
Ray et al.(2013)
RNCMPT00273
0.792
For this family, RBPs with RBD identity >
0.7
will likely have a similar motif
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
TEQG_01370T0
S1
14
88
PEIDSFVMVTVKQIAEMGAYVKLLEYDNIDGMILLSELSRRRIRSIQKLIRVGRNEVVVVLRVDKEKGYIDLSKR
Links
Other
S1
family RBPs
Other
Trichophyton equinum
RBPs
255 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
AAH46695
Xenopus laevis
AAH46695
I
0.000
AAH84231
Xenopus laevis
AAH84231
I
0.000
BX511012.1
Homo sapiens
ENSG00000215699
I
0.000
CR293507.1
Danio rerio
ENSDARG00000022415
I
0.000
D3ZB38_RAT
Rattus norvegicus
ENSRNOG00000007992
I
0.000
ENSCAFG00000013066
Canis familiaris
ENSCAFG00000013066
I
0.000
ENSCHOG00000004836
Choloepus hoffmanni
ENSCHOG00000004836
I
0.000
ENSCHOG00000007773
Choloepus hoffmanni
ENSCHOG00000007773
I
0.000
ENSCJAG00000002933
Callithrix jacchus
ENSCJAG00000002933
I
0.000
ENSCJAG00000007019
Callithrix jacchus
ENSCJAG00000007019
I
0.000
ENSCJAG00000010608
Callithrix jacchus
ENSCJAG00000010608
I
0.000
ENSCJAG00000021801
Callithrix jacchus
ENSCJAG00000021801
I
0.000
ENSCPOG00000024533
Cavia porcellus
ENSCPOG00000024533
I
0.000
ENSECAG00000023709
Equus caballus
ENSECAG00000023709
I
0.000
ENSEEUG00000014286
Erinaceus europaeus
ENSEEUG00000014286
I
0.000
ENSGACG00000002231
Gasterosteus aculeatus
ENSGACG00000002231
I
0.000
ENSGGOG00000000392
Gorilla gorilla
ENSGGOG00000000392
I
0.000
ENSLAFG00000026905
Loxodonta africana
ENSLAFG00000026905
I
0.000
ENSMGAG00000005772
Meleagris gallopavo
ENSMGAG00000005772
I
0.000
ENSMICG00000000520
Microcebus murinus
ENSMICG00000000520
I
0.000
ENSMICG00000017029
Microcebus murinus
ENSMICG00000017029
I
0.000
ENSMMUG00000013784
Macaca mulatta
ENSMMUG00000013784
I
0.000
ENSOCUG00000021782
Oryctolagus cuniculus
ENSOCUG00000021782
I
0.000
ENSOCUG00000024013
Oryctolagus cuniculus
ENSOCUG00000024013
I
0.000
ENSOCUG00000028110
Oryctolagus cuniculus
ENSOCUG00000028110
I
0.000
ENSOGAG00000015374
Otolemur garnettii
ENSOGAG00000015374
I
0.000
ENSOPRG00000018613
Ochotona princeps
ENSOPRG00000018613
I
0.000
ENSPCAG00000004059
Procavia capensis
ENSPCAG00000004059
I
0.000
ENSPPYG00000001726
Pongo pygmaeus
ENSPPYG00000001726
I
0.000
ENSPVAG00000013611
Pteropus vampyrus
ENSPVAG00000013611
I
0.000
ENSSTOG00000000956
Spermophilus tridecemlineatus
ENSSTOG00000000956
I
0.000
ENSTSYG00000009439
Tarsius syrichta
ENSTSYG00000009439
I
0.000
ENSTTRG00000016150
Tursiops truncatus
ENSTTRG00000016150
I
0.000
FUSIP1
Taeniopygia guttata
ENSTGUG00000001178
I
0.000
Fusip1
Homo sapiens
ENSG00000188529
D
0.000
LOC100387136
Callithrix jacchus
ENSCJAG00000020883
I
0.000
LOC100396874
Callithrix jacchus
ENSCJAG00000000822
I
0.000
Q3ZBU5_BOVIN
Bos taurus
ENSBTAG00000008072
I
0.000
Q5ZMR4_CHICK
Gallus gallus
ENSGALG00000004133
I
0.000
SLC9A1
Tetraodon nigroviridis
ENSTNIG00000005725
I
0.000
Srrp
Rattus norvegicus
ENSRNOG00000024247
I
0.000
SRSF10
Takifugu rubripes
ENSTRUG00000006317
I
0.000
Srsf10
Mus musculus
ENSMUSG00000028676
I
0.000
SRSF10
Oryzias latipes
ENSORLG00000007691
I
0.000
Srsf10
Dipodomys ordii
ENSDORG00000009136
I
0.000
srsf12
Xenopus tropicalis
ENSXETG00000005385
I
0.000
SRSF12
Vicugna pacos
ENSVPAG00000004175
I
0.000
SRSF12
Macaca mulatta
ENSMMUG00000014941
I
0.000
SRSF12
Tursiops truncatus
ENSTTRG00000003682
I
0.000
SRSF12
Homo sapiens
ENSG00000154548
I
0.000
SRSF12
Procavia capensis
ENSPCAG00000010020
I
0.000
Srsf12
Mus musculus
ENSMUSG00000054679
I
0.000
SRSF12
Oryctolagus cuniculus
ENSOCUG00000000945
I
0.000
SRSF12
Sus scrofa
ENSSSCG00000004313
I
0.000
SRSF12
Erinaceus europaeus
ENSEEUG00000011026
I
0.000
SRSF12
Monodelphis domestica
ENSMODG00000018282
I
0.000
SRSF12
Pan troglodytes
ENSPTRG00000018415
I
0.000
XM_001362581.1
Monodelphis domestica
ENSMODG00000013020
I
0.000
XM_547294.2
Canis familiaris
ENSCAFG00000003095
I
0.000
XR_020461.1
Pan troglodytes
ENSPTRG00000024234
I
0.000