CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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KLTH0B02002g
(
Kluyveromyces thermotolerans
)
S1
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00575 (S1)
IPR003029
KLTH0B02002g
T61573_0.6
Superfamily (2011-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
eIF-2alpha
M231_0.6
Drosophila melanogaster
WGCAUG
RNAcompete
Ray et al.(2013)
RNCMPT00273
0.842
For this family, RBPs with RBD identity >
0.7
will likely have a similar motif
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
KLTH0B02002g
S1
13
88
YPEVDDVVMVNVQQIAEMGAYVKLLEYDNIEGMVLLSELSRRRIRSIQKLIRVGRNEVVVVLRVDKEKGYIDLSKR
Links
Other
S1
family RBPs
Other
Kluyveromyces thermotolerans
RBPs
258 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
3821.m00489
Tetrahymena thermophila
3821.m00489
N
0.000
ENSOANG00000001063
Ornithorhynchus anatinus
ENSOANG00000001063
N
0.000
estExt_fgenesh2_pm.C_1170007
Branchiostoma floridae
estExt_fgenesh2_pm.C_1170007
N
0.000
estExt_Genewise1.C_23809
Thielavia terrestris
estExt_Genewise1.C_23809
N
0.000
estExt_Genewise1.C_30053
Myceliophthora thermophila
estExt_Genewise1.C_30053
N
0.000
MGG_10681
Magnaporthe oryzae
MGG_10681
N
0.000
PPIL4
Taeniopygia guttata
ENSTGUG00000010655
N
0.000
PPIL4
Meleagris gallopavo
ENSMGAG00000012596
N
0.000
PPIL4
Takifugu rubripes
ENSTRUG00000006670
N
0.000
PPIL4
Gallus gallus
ENSGALG00000012364
N
0.000
ppil4
Danio rerio
ENSDARG00000043854
N
0.000
PPIL4
Tetraodon nigroviridis
ENSTNIG00000002706
N
0.000
PTSG_07932
Salpingoeca rosetta
PTSG_07932
N
0.000
Sjc_0091550
Schistosoma japonicum
Sjc_0091550
N
0.000