CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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Kwal_15422
(
Kluyveromyces waltii
)
S1
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00575 (S1)
IPR003029
Kwal_15422
T61578_0.6
Superfamily (2011-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
eIF-2alpha
M231_0.6
Drosophila melanogaster
WGCAUG
RNAcompete
Ray et al.(2013)
RNCMPT00273
0.842
For this family, RBPs with RBD identity >
0.7
will likely have a similar motif
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
Kwal_15422
S1
13
88
YPEVDDVVMVNVQQIAEMGAYVKLLEYDNIEGMVLLSELSRRRIRSIQKLIRVGRNEVVVVLRVDKEKGYIDLSKR
Links
Other
S1
family RBPs
Other
Kluyveromyces waltii
RBPs
258 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
AAEL002879
Aedes aegypti
AAEL002879
I
0.000
AGAP001419
Anopheles gambiae
AGAP001419
I
0.000
amel4_ncbi_hmm4283
Apis mellifera
amel4_ncbi_hmm4283
I
0.000
CG17838
Drosophila melanogaster
FBgn0038826
D
0.000
GA27045-RA
Drosophila pseudoobscura
FBgn0248416
I
0.000
GE25686
Drosophila yakuba
FBgn0242747
I
0.000
GF16693
Drosophila ananassae
FBgn0093714
I
0.000
GG24121
Drosophila erecta
FBgn0116260
I
0.000
GH17270
Drosophila grimshawi
FBgn0124740
I
0.000
GI10594
Drosophila mojavensis
FBgn0133358
I
0.000
GJ22950
Drosophila virilis
FBgn0210053
I
0.000
GM23135
Drosophila sechellia
FBgn0178003
I
0.000
ISCW004858
Ixodes scapularis
ISCW004858
I
0.000
nasonia_NCBI_hmm256414
Nasonia vitripennis
nasonia_NCBI_hmm256414
I
0.000
NCBI_GNO_2900131
Daphnia pulex
NCBI_GNO_2900131
I
0.000
PHUM268060
Pediculus humanus
PHUM268060
I
0.000