PCBP2 (Echinops telfairi)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 ENSETEG00000014741 T18759_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
PCBP2
M043_0.6 		Homo sapiens CCYYCCH RNAcompete
Ray et al.(2013)
RNCMPT00044 		0.887
pcbp2
M211_0.6 		Danio rerio WWUCCC RNAcompete
Ray et al.(2013)
RNCMPT00246 		0.858
Pcbp1
M207_0.6 		Mus musculus CYUUCC RNAcompete
Ray et al.(2013)
RNCMPT00239 		0.833
PCBP1
M177_0.6 		Homo sapiens CCWWHCC RNAcompete
Ray et al.(2013)
RNCMPT00186 		0.833
Pcbp3
M188_0.6 		Mus musculus UUUYCC RNAcompete
Ray et al.(2013)
RNCMPT00215 		0.799
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSETEP00000011950 KH 15 75
ENSETEP00000011950 KH 99 178
ENSETEP00000011950 KH 286 348

Links

Other KH family RBPs
Other Echinops telfairi RBPs

97 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
ARB_03865 Arthroderma benhamiae ARB_03865 N 0.000
fgenesh1_pm.00082_#_76 Aspergillus carbonarius fgenesh1_pm.00082_#_76 N 0.000
ACLA_068670 Aspergillus clavatus CADACLAG00006690 N 0.000
AFLA_129820 Aspergillus flavus CADAFLAG00010040 N 0.000
AFUA_2G05670 Aspergillus fumigatus CADAFUAG00003365 N 0.000
ANIA_07480 Aspergillus nidulans CADANIAG00000573 N 0.000
An02g14100 Aspergillus niger CADANGAG00002937 N 0.000
AO090001000681 Aspergillus oryzae CADAORAG00000620 N 0.000
ATEG_06757 Aspergillus terreus CADATEAG00009116 N 0.000
BDBG_09466 Blastomyces dermatitidis BDBG_09466 N 0.000
BC1G_14118 Botrytis cinerea BC1G_14118 N 0.000
CHGG_05709 Chaetomium globosum CHGG_05709 N 0.000
CIMG_00769 Coccidioides immitis CIMG_00769 N 0.000
CPSG_07981 Coccidioides posadasii CPSG_07981 N 0.000
estExt_Genewise1.C_240173 Cochliobolus heterostrophus C5 estExt_Genewise1.C_240173 N 0.000
GLRG_03643 Colletotrichum graminicola GLRG_03643 N 0.000
estExt_fgenesh1_pm.C_10719 Cryphonectria parasitica estExt_fgenesh1_pm.C_10719 N 0.000
FGSG_05444 Fusarium graminearum FGSG_05444 N 0.000
FOXG_09455 Fusarium oxysporum FOXG_09455 N 0.000
FVEG_07083 Fusarium verticillioides FVEG_07083 N 0.000
MGG_08898 Magnaporthe oryzae MGG_08898 N 0.000
MCYG_03534 Microsporum canis MCYG_03534 N 0.000
MGYG_03143 Microsporum gypseum MGYG_03143 N 0.000
fgenesh1_pg.4_#_772 Myceliophthora thermophila fgenesh1_pg.4_#_772 N 0.000
estExt_fgenesh1_pg.C_260060 Mycosphaerella fijiensis estExt_fgenesh1_pg.C_260060 N 0.000
estExt_Genewise1Plus.C_chr_30420 Mycosphaerella graminicola estExt_Genewise1Plus.C_chr_30420 N 0.000
estExt_fgenesh1_pg.C_sca_10_chr8_2_00298 Nectria haematococca estExt_fgenesh1_pg.C_sca_10_chr8_2_00298 N 0.000
NFIA_082390 Neosartorya fischeri CADNFIAG00007689 N 0.000
NCU06459 Neurospora crassa NCU06459 N 0.000
estExt_fgenesh3_kg.C_190032 Neurospora discreta estExt_fgenesh3_kg.C_190032 N 0.000
estExt_fgenesh1_pm.C_60118 Neurospora tetrasperma estExt_fgenesh1_pm.C_60118 N 0.000
PABG_04754 Paracoccidioides brasiliensis PABG_04754 N 0.000
Pc22g08880 Penicillium chrysogenum Pc22g08880 N 0.000
EAT78895.1 Phaeosphaeria nodorum EAT78895.1 N 0.000
Pa_7_9880 Podospora anserina Pa_7_9880 N 0.000
PTRG_09392 Pyrenophora tritici repentis PTRG_09392 N 0.000
SS1G_13716 Sclerotinia sclerotiorum SS1G_13716 N 0.000
SNOG_13871 Stagonospora nodorum SNOG_13871 N 0.000
estExt_Genewise1.C_32212 Thielavia terrestris estExt_Genewise1.C_32212 N 0.000
e_gw1.15.72.1 Trichoderma atroviride e_gw1.15.72.1 N 0.000
e_gw1.17.287.1 Trichoderma reesei e_gw1.17.287.1 N 0.000
e_gw1.10.53.1 Trichoderma virens e_gw1.10.53.1 N 0.000
TEQG_01254 Trichophyton equinum TEQG_01254 N 0.000
TERG_04964 Trichophyton rubrum TERG_04964 N 0.000
TESG_05970 Trichophyton tonsurans TESG_05970 N 0.000
GSTUMT00008077001 Tuber melanosporum GSTUMT00008077001 N 0.000
UREG_00743 Uncinocarpus reesii UREG_00743 N 0.000
VDBG_08703 Verticillium albo atrum VDBG_08703 N 0.000
VDAG_06364 Verticillium dahliae VDAG_06364 N 0.000