PCBP2 (Echinops telfairi)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 ENSETEG00000014741 T18759_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
PCBP2
M043_0.6 		Homo sapiens CCYYCCH RNAcompete
Ray et al.(2013)
RNCMPT00044 		0.887
pcbp2
M211_0.6 		Danio rerio WWUCCC RNAcompete
Ray et al.(2013)
RNCMPT00246 		0.858
Pcbp1
M207_0.6 		Mus musculus CYUUCC RNAcompete
Ray et al.(2013)
RNCMPT00239 		0.833
PCBP1
M177_0.6 		Homo sapiens CCWWHCC RNAcompete
Ray et al.(2013)
RNCMPT00186 		0.833
Pcbp3
M188_0.6 		Mus musculus UUUYCC RNAcompete
Ray et al.(2013)
RNCMPT00215 		0.799
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSETEP00000011950 KH 15 75
ENSETEP00000011950 KH 99 178
ENSETEP00000011950 KH 286 348

Links

Other KH family RBPs
Other Echinops telfairi RBPs

97 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
DGIL_AUG5s5532g9t1 Acyrtosiphon pisum DGIL_AUG5s5532g9t1 I 0.000
Ame_R002707 Ailuropoda melanoleuca Ame_R002707 I 0.833
Ame_R011627 Ailuropoda melanoleuca Ame_R011627 I 0.794
Ame_R007160 Ailuropoda melanoleuca Ame_R007160 I 0.716
PCBP4 Anolis carolinensis ENSACAG00000011701 I 0.000
ENSACAG00000009819 Anolis carolinensis ENSACAG00000009819 I 0.799
ENSACAG00000000783 Anolis carolinensis ENSACAG00000000783 I 0.887
amel4_ncbi_hmm16330 Apis mellifera amel4_ncbi_hmm16330 I 0.000
PCBP4_BOVIN Bos taurus ENSBTAG00000018622 I 0.000
Q3SYT9_BOVIN Bos taurus ENSBTAG00000020757 I 0.887
Q17QV0_BOVIN Bos taurus ENSBTAG00000030775 I 0.789
PCBP1_BOVIN Bos taurus ENSBTAG00000008985 I 0.833
fgenesh2_pg.scaffold_166000022 Branchiostoma floridae fgenesh2_pg.scaffold_166000022 I 0.000
estExt_gwp.C_3950051 Branchiostoma floridae estExt_gwp.C_3950051 I 0.000
LOC100408015 Callithrix jacchus ENSCJAG00000001903 I 0.799
ENSCJAG00000034075 Callithrix jacchus ENSCJAG00000034075 I 0.882
A6MKZ3_CALJA Callithrix jacchus ENSCJAG00000022539 I 0.819
LOC100392590 Callithrix jacchus ENSCJAG00000018590 I 0.877
LOC100409398 Callithrix jacchus ENSCJAG00000007694 I 0.828
A6MK33_CALJA Callithrix jacchus ENSCJAG00000005783 I 0.000
PCBP1 Callithrix jacchus ENSCJAG00000004017 I 0.799
PCBP4 Canis familiaris ENSCAFG00000010019 I 0.000
PCBP2 Canis familiaris ENSCAFG00000006821 I 0.887
PCBP1 Canis familiaris ENSCAFG00000013845 I 0.809
fgenesh1_pm.C_scaffold_76000004 Capitella teleta fgenesh1_pm.C_scaffold_76000004 I 0.000
ENSCPOG00000000967 Cavia porcellus ENSCPOG00000000967 I 0.887
PCBP3 Cavia porcellus ENSCPOG00000003648 I 0.799
PCBP1 Cavia porcellus ENSCPOG00000013511 I 0.833
PCBP4 Cavia porcellus ENSCPOG00000014617 I 0.000
pcbp3 Danio rerio ENSDARG00000054378 I 0.711
pcbp2 Danio rerio ENSDARG00000013184 D 0.858
PASA_GEN_0700132 Daphnia pulex PASA_GEN_0700132 I 0.000
PCBP2 Dasypus novemcinctus ENSDNOG00000008688 I 0.887
PCBP3 Echinops telfairi ENSETEG00000015988 I 0.000
PCBP2 Equus caballus ENSECAG00000022389 I 0.887
LOC100050101 Equus caballus ENSECAG00000012413 I 0.799
LOC100060660 Equus caballus ENSECAG00000024218 I 0.000
LOC100050579 Equus caballus ENSECAG00000002544 I 0.833
PCBP3 Felis catus ENSFCAG00000014812 I 0.000
PCBP3 Gallus gallus ENSGALG00000013155 I 0.804
PCBP3 Gallus gallus ENSGALG00000004394 I 0.765
PCBP3 Gasterosteus aculeatus ENSGACG00000014955 I 0.789
PCBP3 Gasterosteus aculeatus ENSGACG00000002266 I 0.789
PCBP4 Gasterosteus aculeatus ENSGACG00000002664 I 0.000
ENSGACG00000006681 Gasterosteus aculeatus ENSGACG00000006681 I 0.843
ENSGACG00000003044 Gasterosteus aculeatus ENSGACG00000003044 I 0.000
ENSGACG00000003197 Gasterosteus aculeatus ENSGACG00000003197 I 0.838
PCBP3 Gorilla gorilla ENSGGOG00000003683 I 0.799
PCBP4 Gorilla gorilla ENSGGOG00000012474 I 0.000
PCBP2 Gorilla gorilla ENSGGOG00000012613 I 0.887
PCBP1 Gorilla gorilla ENSGGOG00000028130 I 0.833
PCBP2 Homo sapiens ENSG00000197111 D 0.887
PCBP3 Homo sapiens ENSG00000183570 I 0.799
PCBP1 Homo sapiens ENSG00000169564 D 0.833
PCBP4 Homo sapiens ENSG00000090097 I 0.000
ISCW016289 Ixodes scapularis ISCW016289 I 0.000
ENSLAFG00000013187 Loxodonta africana ENSLAFG00000013187 I 0.887
ENSLAFG00000025534 Loxodonta africana ENSLAFG00000025534 I 0.725
PCBP3 Loxodonta africana ENSLAFG00000020835 I 0.725
PCBP2 Macaca mulatta ENSMMUG00000006608 I 0.887
PCBP3 Macaca mulatta ENSMMUG00000003825 I 0.799
PCBP4 Macaca mulatta ENSMMUG00000022205 I 0.000
PCBP3 Macropus eugenii ENSMEUG00000012960 I 0.760
PCBP2 Macropus eugenii ENSMEUG00000001887 I 0.804
ENSMGAG00000006794 Meleagris gallopavo ENSMGAG00000006794 I 0.760
PCBP3 Meleagris gallopavo ENSMGAG00000001883 I 0.799
PCBP3 Microcebus murinus ENSMICG00000012679 I 0.711
PCBP2 Microcebus murinus ENSMICG00000011651 I 0.887
ENSMODG00000000280 Monodelphis domestica ENSMODG00000000280 I 0.887
ENSMODG00000020653 Monodelphis domestica ENSMODG00000020653 I 0.711
ENSMODG00000017748 Monodelphis domestica ENSMODG00000017748 I 0.809
PCBP4 Monodelphis domestica ENSMODG00000011790 I 0.000
Pcbp3 Mus musculus ENSMUSG00000001120 D 0.799
Pcbp4 Mus musculus ENSMUSG00000023495 I 0.000
Pcbp2 Mus musculus ENSMUSG00000056851 I 0.887
Pcbp1 Mus musculus ENSMUSG00000051695 D 0.833
PCBP3 Myotis lucifugus ENSMLUG00000003074 I 0.000
PCBP2 Myotis lucifugus ENSMLUG00000009971 I 0.755
PCBP1 Myotis lucifugus ENSMLUG00000014173 I 0.833
nasonia_NCBI_hmm938274 Nasonia vitripennis nasonia_NCBI_hmm938274 I 0.000
PCBP2 Ochotona princeps ENSOPRG00000004680 I 0.887
PCBP3 Ochotona princeps ENSOPRG00000003431 I 0.754
PCBP4 Ornithorhynchus anatinus ENSOANG00000014110 I 0.000
PCBP3 Oryctolagus cuniculus ENSOCUG00000002696 I 0.799
PCBP1_RABIT Oryctolagus cuniculus ENSOCUG00000003634 I 0.833
ENSOCUG00000022490 Oryctolagus cuniculus ENSOCUG00000022490 I 0.887
PCBP4 Oryctolagus cuniculus ENSOCUG00000025336 I 0.000
PCBP3 Oryzias latipes ENSORLG00000000059 I 0.761
ENSORLG00000014385 Oryzias latipes ENSORLG00000014385 I 0.716
ENSORLG00000012872 Oryzias latipes ENSORLG00000012872 I 0.853
ENSORLG00000005176 Oryzias latipes ENSORLG00000005176 I 0.853
PCBP4 Oryzias latipes ENSORLG00000003061 I 0.000
PCBP3 Otolemur garnettii ENSOGAG00000008044 I 0.706
PCBP2 Pan troglodytes ENSPTRG00000005018 I 0.887
PCBP1 Pan troglodytes ENSPTRG00000012025 I 0.833
PCBP3 Pan troglodytes ENSPTRG00000014010 I 0.799
PCBP4 Pan troglodytes ENSPTRG00000014983 I 0.000
ENSPPYG00000013822 Pongo pygmaeus ENSPPYG00000013822 I 0.000
ENSPPYG00000012328 Pongo pygmaeus ENSPPYG00000012328 I 0.833
ENSPPYG00000004581 Pongo pygmaeus ENSPPYG00000004581 I 0.887
PCBP3 Procavia capensis ENSPCAG00000001454 I 0.000
PCBP2 Procavia capensis ENSPCAG00000005154 I 0.887
PCBP2 Pteropus vampyrus ENSPVAG00000012284 I 0.887
PCBP3 Pteropus vampyrus ENSPVAG00000000832 I 0.000
Pcbp1 Rattus norvegicus ENSRNOG00000017708 I 0.833
ENSRNOG00000019487 Rattus norvegicus ENSRNOG00000019487 I 0.784
D4ADH2_RAT Rattus norvegicus ENSRNOG00000039295 I 0.789
Pcbp4 Rattus norvegicus ENSRNOG00000012406 I 0.000
D4A8D6_RAT Rattus norvegicus ENSRNOG00000006713 I 0.735
Pcbp3 Rattus norvegicus ENSRNOG00000001245 I 0.799
PCBP2 Sus scrofa ENSSSCG00000000274 I 0.887
PCBP4 Taeniopygia guttata ENSTGUG00000006393 I 0.000
PCBP3-2 Taeniopygia guttata ENSTGUG00000008158 I 0.804
PCBP1 Taeniopygia guttata ENSTGUG00000016232 I 0.716
PCBP4 Takifugu rubripes ENSTRUG00000007426 I 0.000
ENSTRUG00000017789 Takifugu rubripes ENSTRUG00000017789 I 0.000
PCBP3 Takifugu rubripes ENSTRUG00000013604 I 0.789
PCBP3 Takifugu rubripes ENSTRUG00000006280 I 0.789
ENSTRUG00000011419 Takifugu rubripes ENSTRUG00000011419 I 0.843
ENSTRUG00000009361 Takifugu rubripes ENSTRUG00000009361 I 0.853
PCBP2 Tarsius syrichta ENSTSYG00000009771 I 0.843
PCBP4 Tetraodon nigroviridis ENSTNIG00000017887 I 0.000
PCBP3 Tetraodon nigroviridis ENSTNIG00000010615 I 0.789
PCBP3 Tetraodon nigroviridis ENSTNIG00000008872 I 0.000
PCBP1 Tetraodon nigroviridis ENSTNIG00000012585 I 0.848
PCBP2 Tupaia belangeri ENSTBEG00000015592 I 0.716
PCBP2 Tursiops truncatus ENSTTRG00000017174 I 0.887
PCBP3 Tursiops truncatus ENSTTRG00000015075 I 0.799
AAH41241 Xenopus laevis AAH41241 I 0.873
AAH84195 Xenopus laevis AAH84195 I 0.873
CAB50743 Xenopus laevis CAB50743 I 0.873
CAD29864 Xenopus laevis CAD29864 I 0.873
pcbp3 Xenopus tropicalis ENSXETG00000012658 I 0.873