e_gw1.18.222.1 (Chlorella NC64A)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 e_gw1.18.222.1 T20750_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
e_gw1.18.222.1 KH 142 190

Links

Other KH family RBPs
Other Chlorella NC64A RBPs

132 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
DGIL_AUG5s4501g8t1 Acyrtosiphon pisum DGIL_AUG5s4501g8t1 N 0.700
estExt_fgenesh2_kg.C_20130 Agaricus bisporus estExt_fgenesh2_kg.C_20130 N 0.740
Ame_R013855 Ailuropoda melanoleuca Ame_R013855 N 0.720
AMAG_12889 Allomyces macrogynus AMAG_12889 N 0.760
AMAG_14219 Allomyces macrogynus AMAG_14219 N 0.760
PNO1 Anolis carolinensis ENSACAG00000001218 N 0.720
amel4_ncbi_hmm14037 Apis mellifera amel4_ncbi_hmm14037 N 0.700
PNO1_BOVIN Bos taurus ENSBTAG00000010604 N 0.720
fgenesh2_pg.scaffold_196000015 Branchiostoma floridae fgenesh2_pg.scaffold_196000015 N 0.720
fgenesh2_pm.scaffold_78000001 Branchiostoma floridae fgenesh2_pm.scaffold_78000001 N 0.720
LOC100389955 Callithrix jacchus ENSCJAG00000006564 N 0.720
PNO1 Canis familiaris ENSCAFG00000003256 N 0.720
PK08146.1 Cannabis sativa PK08146.1 N 0.700
estExt_Genewise1.C_5820041 Capitella teleta estExt_Genewise1.C_5820041 N 0.700
PNO1 Cavia porcellus ENSCPOG00000010130 N 0.720
Chlre2_kg.scaffold_20000177 Chlamydomonas reinhardtii Chlre2_kg.scaffold_20000177 N 0.840
fgeneshCV_pg.C_scaffold_11000142 Chlorella vulgaris fgeneshCV_pg.C_scaffold_11000142 N 0.760
ENSCING00000009577 Ciona intestinalis ENSCING00000009577 N 0.720
ENSCSAVG00000001303 Ciona savignyi ENSCSAVG00000001303 N 0.720
Genemark1.5719_g Coccomyxa C 169 Genemark1.5719_g N 0.760
estExt_fgenesh1_kg.C_140013 Cochliobolus heterostrophus C5 estExt_fgenesh1_kg.C_140013 N 0.700
CNBG_1323 Cryptococcus neoformans CNBG_1323 N 0.735
Cucsa.201760 Cucumis sativus Cucsa.201760 N 0.700
Cucsa.041830 Cucumis sativus Cucsa.041830 N 0.700
pno1 Danio rerio ENSDARG00000008502 N 0.740
pno1 Dictyostelium discoideum DDB_G0287557 N 0.735
GID1.0042265 Dictyostelium purpureum GID1.0042265 N 0.735
Pno1 Dipodomys ordii ENSDORG00000006867 N 0.720
LOC100061904 Equus caballus ENSECAG00000011263 N 0.720
PNO1 Erinaceus europaeus ENSEEUG00000009611 N 0.720
FGSG_01345 Fusarium graminearum FGSG_01345 N 0.700
FOXG_00036 Fusarium oxysporum FOXG_00036 N 0.700
FVEG_01480 Fusarium verticillioides FVEG_01480 N 0.700
PNO1_CHICK Gallus gallus ENSGALG00000009093 N 0.740
PNO1 Gasterosteus aculeatus ENSGACG00000012047 N 0.700
PNO1 Gorilla gorilla ENSGGOG00000009158 N 0.720
e_gw1.2.756.1 Heterobasidion annosum e_gw1.2.756.1 N 0.740
PNO1 Homo sapiens ENSG00000115946 N 0.720
XP_002162789.1 Hydra magnipapillata XP_002162789.1 N 0.720
PNO1_IXOSC Ixodes scapularis ISCW023560 N 0.735
KLLA0C06446g Kluyveromyces lactis KLLA0C06446g N 0.700
KLTH0G02574g Kluyveromyces thermotolerans KLTH0G02574g N 0.700
Kwal_18864 Kluyveromyces waltii Kwal_18864 N 0.700
e_gwh1.2.512.1 Laccaria bicolor e_gwh1.2.512.1 N 0.740
LmxM34.3540 Leishmania mexicana LmxM34.3540 N 0.714
PNO1 Loxodonta africana ENSLAFG00000000046 N 0.720
XM_001095777.1 Macaca mulatta ENSMMUG00000030357 N 0.720
Q7YRC8_MACMU Macaca mulatta ENSMMUG00000017461 N 0.720
PNO1 Macropus eugenii ENSMEUG00000004504 N 0.720
MGG_05136 Magnaporthe oryzae MGG_05136 N 0.714
EDP42908.1 Malassezia globosa EDP42908.1 N 0.700
MDP0000265633 Malus x domestica MDP0000265633 N 0.700
MDP0000120063 Malus x domestica MDP0000120063 N 0.700
MDP0000754021 Malus x domestica MDP0000754021 N 0.700
MDP0000136407 Malus x domestica MDP0000136407 N 0.700
cassava7030.valid.m1 Manihot esculenta cassava7030.valid.m1 N 0.700
cassava30594.valid.m1 Manihot esculenta cassava30594.valid.m1 N 0.720
Medtr3g080390 Medicago truncatula Medtr3g080390 N 0.700
estExt_Genewise1.C_260084 Melampsora laricis populina estExt_Genewise1.C_260084 N 0.700
PNO1 Meleagris gallopavo ENSMGAG00000004514 N 0.740
PNO1 Microcebus murinus ENSMICG00000010897 N 0.720
e_gw1.4.614.1 Micromonas pusilla e_gw1.4.614.1 N 0.720
PNO1 Monodelphis domestica ENSMODG00000003567 N 0.720
estExt_Genewise1Plus.C_10658 Mucor circinelloides estExt_Genewise1Plus.C_10658 N 0.780
Pno1 Mus musculus ENSMUSG00000020116 N 0.720
PNO1 Myotis lucifugus ENSMLUG00000010850 N 0.720
nasonia_NCBI_hmm120183 Nasonia vitripennis nasonia_NCBI_hmm120183 N 0.740
estExt_fgenesh1_pg.C_sca_1_chr1_3_00036 Nectria haematococca estExt_fgenesh1_pg.C_sca_1_chr1_3_00036 N 0.700
fgenesh1_pg.scaffold_18000119 Nematostella vectensis fgenesh1_pg.scaffold_18000119 N 0.720
NCLIV_012590 Neospora caninum NCLIV_012590 N 0.714
PNO1 Ochotona princeps ENSOPRG00000009643 N 0.720
PNO1 Ornithorhynchus anatinus ENSOANG00000008388 N 0.720
ENSOCUG00000006100 Oryctolagus cuniculus ENSOCUG00000006100 N 0.720
ENSOCUG00000022236 Oryctolagus cuniculus ENSOCUG00000022236 N 0.720
Q6VBQ6_ORYLA Oryzias latipes ENSORLG00000002371 N 0.740
e_gwEuk.7.409.1 Ostreococcus lucimarinus e_gwEuk.7.409.1 N 0.760
e_gw1.7.528.1 Ostreococcus RCC809 e_gw1.7.528.1 N 0.760
0700010277 Ostreococcus tauri 0700010277 N 0.740
PNO1 Pan troglodytes ENSPTRG00000011999 N 0.720
GSPATP00020703001 Paramecium tetraurelia GSPATP00020703001 N 0.760
GSPATP00021981001 Paramecium tetraurelia GSPATP00021981001 N 0.760
e_gww2.1.865.1 Phanerochaete chrysosporium e_gww2.1.865.1 N 0.780
estExt_Genewise1Plus.C_250095 Phycomyces blakesleeanus estExt_Genewise1Plus.C_250095 N 0.755
e_gw1.226.39.1 Physcomitrella patens e_gw1.226.39.1 N 0.700
PITG_01680 Phytophthora infestans PITG_01680 N 0.700
fgenesh1_pm.C_scaffold_5000030 Phytophthora ramorum fgenesh1_pm.C_scaffold_5000030 N 0.700
s_468317 Phytophthora sojae s_468317 N 0.700
gw1.1.2472.1 Pleurotus ostreatus gw1.1.2472.1 N 0.760
EFA79428.1 Polysphondylium pallidum EFA79428.1 N 0.735
ENSPPYG00000012353 Pongo pygmaeus ENSPPYG00000012353 N 0.720
B9N5M8_POPTR Populus trichocarpa POPTR_0011s16880 N 0.720
B9GHH7_POPTR Populus trichocarpa POPTR_0001s47320 N 0.720
fgenesh3_pm.54__15 Postia placenta fgenesh3_pm.54__15 N 0.780
PNO1 Procavia capensis ENSPCAG00000016146 N 0.720
ppa011086m Prunus persica ppa011086m N 0.700
ppa009897m Prunus persica ppa009897m N 0.700
PNO1 Pteropus vampyrus ENSPVAG00000012695 N 0.720
PTTG_01898 Puccinia triticina PTTG_01898 N 0.700
Pno1 Rattus norvegicus ENSRNOG00000005524 N 0.720
RO3G_00885 Rhizopus oryzae RO3G_00885 N 0.760
RO3G_05288 Rhizopus oryzae RO3G_05288 N 0.760
28525.m000262 Ricinus communis 28525.m000262 N 0.720
Scas_Contig632.19 Saccharomyces castellii Scas_Contig632.19 N 0.700
PNO1 Saccharomyces cerevisiae YOR145C N 0.700
Skud_Contig1833.8 Saccharomyces kudriavzevii Skud_Contig1833.8 N 0.700
20872_YOR145C Saccharomyces paradoxus 20872_YOR145C N 0.700
PTSG_04415 Salpingoeca rosetta PTSG_04415 N 0.700
SPRG_02415 Saprolegnia parasitica SPRG_02415 N 0.700
e_gw1.2.2126.1 Schizophyllum commune e_gw1.2.2126.1 N 0.740
e_gw1.12.287.1 Serpula lacrymans e_gw1.12.287.1 N 0.760
XP_001202155.1 Strongylocentrotus purpuratus XP_001202155.1 N 0.740
XP_791733.2 Strongylocentrotus purpuratus XP_791733.2 N 0.740
XP_798188.2 Strongylocentrotus purpuratus XP_798188.2 N 0.740
XP_001202160.1 Strongylocentrotus purpuratus XP_001202160.1 N 0.740
PNO1 Sus scrofa ENSSSCG00000008352 N 0.720
PNO1 Taeniopygia guttata ENSTGUG00000002369 N 0.760
PNO1 Takifugu rubripes ENSTRUG00000012470 N 0.720
PNO1 Tetraodon nigroviridis ENSTNIG00000009825 N 0.720
TGGT1_015210 Toxoplasma gondii TGGT1_015210 N 0.714
TGME49_020490 Toxoplasma gondii TGME49_020490 N 0.714
TGVEG_087040 Toxoplasma gondii TGVEG_087040 N 0.714
e_gw1.15.315.1 Tremella mesenterica e_gw1.15.315.1 N 0.720
fgeneshTA2_pg.C_scaffold_14000176 Trichoplax adhaerens fgeneshTA2_pg.C_scaffold_14000176 N 0.720
TvY486_0905560 Trypanosoma vivax TvY486_0905560 N 0.714
PNO1 Tursiops truncatus ENSTTRG00000014002 N 0.720
PNO1 Vicugna pacos ENSVPAG00000012083 N 0.720
estExt_Genewise1Plus.C_600117 Volvox carteri estExt_Genewise1Plus.C_600117 N 0.840
e_gw1.13.100.1 Volvox carteri e_gw1.13.100.1 N 0.796
AAH42279 Xenopus laevis AAH42279 N 0.700
AAQ24169 Xenopus laevis AAQ24169 N 0.700
Q8AVH4 Xenopus laevis Q8AVH4 N 0.700
pno1 Xenopus tropicalis ENSXETG00000017349 N 0.740