CC1G_06273 (Coprinopsis cinerea)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 CC1G_06273 T28543_0.6 Broad (2011-Oct-27)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
CC1G_06273T0 RRM 253 323

Links

Other RRM family RBPs
Other Coprinopsis cinerea RBPs

60 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
estExt_Genewise1Plus.C_30445 Agaricus bisporus estExt_Genewise1Plus.C_30445 N 0.859
AMAG_03225 Allomyces macrogynus AMAG_03225 N 0.761
AB03792.1 Alternaria brassicicola AB03792.1 N 0.704
ARB_01674 Arthroderma benhamiae ARB_01674 N 0.761
fgenesh1_pm.00609_#_590 Aspergillus carbonarius fgenesh1_pm.00609_#_590 N 0.775
ACLA_045660 Aspergillus clavatus CADACLAG00004652 N 0.761
AFLA_113610 Aspergillus flavus CADAFLAG00005095 N 0.761
AFUA_4G06350 Aspergillus fumigatus CADAFUAG00008260 N 0.775
ANIA_04346 Aspergillus nidulans CADANIAG00006114 N 0.775
An04g00680 Aspergillus niger CADANGAG00003776 N 0.775
AO090023000955 Aspergillus oryzae CADAORAG00008034 N 0.761
ATEG_05588 Aspergillus terreus CADATEAG00005000 N 0.775
BRADI3G35650 Brachypodium distachyon BRADI3G35650 N 0.704
PK02111.1 Cannabis sativa PK02111.1 N 0.704
CIMG_04180 Coccidioides immitis CIMG_04180 N 0.761
CPSG_03082 Coccidioides posadasii CPSG_03082 N 0.761
DEHA0A05764g Debaryomyces hansenii DEHA0A05764g N 0.746
Glyma09g17080.1 Glycine max Glyma09g17080.1 N 0.704
Glyma02g29190.1 Glycine max Glyma02g29190.1 N 0.704
gw1.11.934.1 Heterobasidion annosum gw1.11.934.1 N 0.775
eu2.Lbscf0011g04470 Laccaria bicolor eu2.Lbscf0011g04470 N 0.831
EDP41651.1 Malassezia globosa EDP41651.1 N 0.732
Medtr1g137330 Medicago truncatula Medtr1g137330 N 0.746
Medtr8g129780 Medicago truncatula Medtr8g129780 N 0.746
MCYG_01275 Microsporum canis MCYG_01275 N 0.732
MGYG_01823 Microsporum gypseum MGYG_01823 N 0.732
e_gw1.10.335.1 Mucor circinelloides e_gw1.10.335.1 N 0.761
NFIA_109800 Neosartorya fischeri CADNFIAG00009499 N 0.746
LOC_Os08g31810 Oryza sativa LOC_Os08g31810 N 0.704
PABG_04180 Paracoccidioides brasiliensis PABG_04180 N 0.718
Pc22g17020 Penicillium chrysogenum Pc22g17020 N 0.732
PMAA_027560 Penicillium marneffei PMAA_027560 N 0.746
fgenesh1_pg.C_scaffold_4000265 Phanerochaete chrysosporium fgenesh1_pg.C_scaffold_4000265 N 0.845
e_gw1.1.503.1 Phycomyces blakesleeanus e_gw1.1.503.1 N 0.704
gw1.198.122.1 Physcomitrella patens gw1.198.122.1 N 0.704
e_gw1.35.197.1 Physcomitrella patens e_gw1.35.197.1 N 0.704
genemark.9207_g Pleurotus ostreatus genemark.9207_g N 0.789
B9HW06_POPTR Populus trichocarpa POPTR_0010s24120 N 0.718
e_gw1.87.91.1 Postia placenta e_gw1.87.91.1 N 0.845
estExt_Genewise1Plus.C_200094 Postia placenta estExt_Genewise1Plus.C_200094 N 0.845
ppa025985m Prunus persica ppa025985m N 0.704
PGTG_07909 Puccinia graminis PGTG_07909 N 0.718
RO3G_08088 Rhizopus oryzae RO3G_08088 N 0.746
29428.m000321 Ricinus communis 29428.m000321 N 0.704
augustus-scaffold_1.g441 Schizophyllum commune augustus-scaffold_1.g441 N 0.859
SOCG_03680 Schizosaccharomyces octosporus SOCG_03680 N 0.704
SPCC1827.05c Schizosaccharomyces pombe SPCC1827.05c N 0.718
estExt_fgenesh2_pg.C_120136 Selaginella moellendorfii estExt_fgenesh2_pg.C_120136 N 0.718
estExt_fgenesh2_kg.C_71062 Serpula lacrymans estExt_fgenesh2_kg.C_71062 N 0.789
Sb03g045720 Sorghum bicolor Sb03g045720 N 0.704
SPPG_07834 Spizellomyces punctatus SPPG_07834 N 0.789
fgenesh1_pg.C_scaffold_1000567 Sporobolomyces roseus fgenesh1_pg.C_scaffold_1000567 N 0.761
fgeneshTM_pg.1_#_1063 Tremella mesenterica fgeneshTM_pg.1_#_1063 N 0.732
TEQG_06916 Trichophyton equinum TEQG_06916 N 0.761
TERG_07689 Trichophyton rubrum TERG_07689 N 0.761
TESG_01475 Trichophyton tonsurans TESG_01475 N 0.761
TRV_00034 Trichophyton verrucosum TRV_00034 N 0.761
GSTUMT00006382001 Tuber melanosporum GSTUMT00006382001 N 0.761
GSVIVG00021851001 Vitis vinifera GSVIVG00021851001 N 0.732
YALI0F14245g Yarrowia lipolytica YALI0F14245g N 0.732