hnrnph1l (Danio rerio)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSDARG00000005551 T36042_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
HNRNPH2
M151_0.6 		Homo sapiens GGGAGGG RNAcompete
Ray et al.(2013)
RNCMPT00160 		0.895
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSDARP00000027385 RRM 9 80
ENSDARP00000027385 RRM 109 178
ENSDARP00000027385 RRM 256 323
ENSDARP00000065446 RRM 11 74
ENSDARP00000065446 RRM 152 219

Links

Other RRM family RBPs
Other Danio rerio RBPs

132 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Ame_R001515 Ailuropoda melanoleuca Ame_R001515 N 0.734
Ame_R005224 Ailuropoda melanoleuca Ame_R005224 I 0.833
Ame_R009346 Ailuropoda melanoleuca Ame_R009346 I 0.910
Ame_R018226 Ailuropoda melanoleuca Ame_R018226 I 0.900
HNRNPH3 Anolis carolinensis ENSACAG00000010365 N 0.727
ENSACAG00000016323 Anolis carolinensis ENSACAG00000016323 I 0.876
HNRNPH3 Bos taurus ENSBTAG00000014316 N 0.734
HNRH2_BOVIN Bos taurus ENSBTAG00000007499 I 0.900
HNRPF_BOVIN Bos taurus ENSBTAG00000008853 I 0.829
HNRNPH1 Bos taurus ENSBTAG00000009389 I 0.910
LOC100407750 Callithrix jacchus ENSCJAG00000022707 N 0.719
LOC100392844 Callithrix jacchus ENSCJAG00000019154 N 0.734
HNRNPF Callithrix jacchus ENSCJAG00000016238 I 0.829
HNRNPH2 Callithrix jacchus ENSCJAG00000004908 I 0.895
HNRNPH1 Callithrix jacchus ENSCJAG00000009931 I 0.910
HNRNPH2 Canis familiaris ENSCAFG00000017693 I 0.900
HNRNPH1 Canis familiaris ENSCAFG00000000336 I 0.910
HNRNPF Canis familiaris ENSCAFG00000007044 I 0.833
HNRNPH3 Canis familiaris ENSCAFG00000013619 N 0.734
HNRNPH3 Cavia porcellus ENSCPOG00000006397 N 0.734
HNRNPH2 Cavia porcellus ENSCPOG00000012405 I 0.900
HNRNPF Cavia porcellus ENSCPOG00000003678 I 0.833
HNRNPH1 Cavia porcellus ENSCPOG00000001485 I 0.910
HNRNPH3 Choloepus hoffmanni ENSCHOG00000012954 N 0.735
ENSCHOG00000003841 Choloepus hoffmanni ENSCHOG00000003841 I 0.814
HNRNPH3 Danio rerio ENSDARG00000039466 I 0.748
Hnrnph1 Dipodomys ordii ENSDORG00000005453 I 0.910
ENSDORG00000005431 Dipodomys ordii ENSDORG00000005431 I 0.829
HNRNPH2 Echinops telfairi ENSETEG00000008416 I 0.900
HNRNPH1 Echinops telfairi ENSETEG00000011303 I 0.895
LOC100067495 Equus caballus ENSECAG00000014429 I 0.814
LOC100050002 Equus caballus ENSECAG00000003229 I 0.829
LOC100063127 Equus caballus ENSECAG00000007190 N 0.734
LOC100057665 Equus caballus ENSECAG00000023575 I 0.900
ENSEEUG00000013364 Erinaceus europaeus ENSEEUG00000013364 N 0.835
HNRNPH2 Felis catus ENSFCAG00000015400 I 0.848
HNRNPH1 Felis catus ENSFCAG00000001204 I 0.786
Q5F3I8_CHICK Gallus gallus ENSGALG00000005955 I 0.905
Q5F3D2_CHICK Gallus gallus ENSGALG00000003947 N 0.727
HNRNPH1 Gasterosteus aculeatus ENSGACG00000018352 I 0.919
HNRNPH3 Gasterosteus aculeatus ENSGACG00000016118 I 0.748
HNRNPH2 Gorilla gorilla ENSGGOG00000008096 I 0.895
HNRNPF Gorilla gorilla ENSGGOG00000010867 I 0.829
HNRNPH3 Gorilla gorilla ENSGGOG00000025378 N 0.734
HNRNPH1 Gorilla gorilla ENSGGOG00000025844 I 0.910
HNRNPH1 Homo sapiens ENSG00000169045 I 0.910
HNRNPF Homo sapiens ENSG00000169813 I 0.829
HNRNPH3 Homo sapiens ENSG00000096746 N 0.734
HNRNPH2 Homo sapiens ENSG00000126945 D 0.895
HNRNPF Loxodonta africana ENSLAFG00000000424 I 0.829
HNRNPH1 Loxodonta africana ENSLAFG00000015766 I 0.919
HNRNPH3 Loxodonta africana ENSLAFG00000012955 N 0.734
HNRNPF Macaca mulatta ENSMMUG00000020982 I 0.829
HNRNPH2 Macaca mulatta ENSMMUG00000019580 I 0.895
ENSMMUG00000017392 Macaca mulatta ENSMMUG00000017392 I 0.757
HNRNPH1 Macaca mulatta ENSMMUG00000010843 N 0.835
HNRNPH3 Macaca mulatta ENSMMUG00000009792 N 0.734
HNRNPH3 Macropus eugenii ENSMEUG00000013139 N 0.719
ENSMGAG00000007328 Meleagris gallopavo ENSMGAG00000007328 I 0.905
ENSMICG00000016899 Microcebus murinus ENSMICG00000016899 N 0.719
HNRNPF Microcebus murinus ENSMICG00000001490 I 0.833
ENSMICG00000014218 Microcebus murinus ENSMICG00000014218 I 0.800
ENSMODG00000009436 Monodelphis domestica ENSMODG00000009436 I 0.914
HNRNPH3 Monodelphis domestica ENSMODG00000017283 N 0.727
Hnrnph2 Mus musculus ENSMUSG00000045427 I 0.900
Hnrnpf Mus musculus ENSMUSG00000042079 I 0.833
Hnrnph1 Mus musculus ENSMUSG00000007850 I 0.910
Hnrnph3 Mus musculus ENSMUSG00000020069 N 0.734
HNRNPF Myotis lucifugus ENSMLUG00000007261 I 0.729
HNRNPH3 Myotis lucifugus ENSMLUG00000000143 N 0.734
HNRNPH3 Ochotona princeps ENSOPRG00000014850 N 0.727
HNRNPH2 Ochotona princeps ENSOPRG00000007985 I 0.900
HNRNPH1 Ochotona princeps ENSOPRG00000003513 N 0.848
ENSOANG00000010222 Ornithorhynchus anatinus ENSOANG00000010222 I 0.914
HNRNPH3 Ornithorhynchus anatinus ENSOANG00000002260 N 0.727
ENSOCUG00000024719 Oryctolagus cuniculus ENSOCUG00000024719 I 0.833
HNRNPH3 Oryctolagus cuniculus ENSOCUG00000004443 N 0.734
ENSOCUG00000006387 Oryctolagus cuniculus ENSOCUG00000006387 I 0.900
ENSOCUG00000010629 Oryctolagus cuniculus ENSOCUG00000010629 I 0.900
ENSOCUG00000024604 Oryctolagus cuniculus ENSOCUG00000024604 I 0.786
HNRNPH1 Oryctolagus cuniculus ENSOCUG00000017150 I 0.910
HNRNPH1 Oryzias latipes ENSORLG00000006932 I 0.905
HNRNPH3 Oryzias latipes ENSORLG00000010499 I 0.743
HNRNPH1 Otolemur garnettii ENSOGAG00000012631 I 0.800
HNRNPF Otolemur garnettii ENSOGAG00000013734 I 0.833
HNRNPH2 Pan troglodytes ENSPTRG00000022107 I 0.895
HNRNPH1 Pan troglodytes ENSPTRG00000017617 I 0.910
HNRNPH3 Pan troglodytes ENSPTRG00000002553 N 0.734
HNRNPF Pan troglodytes ENSPTRG00000002446 I 0.829
ENSPPYG00000020553 Pongo pygmaeus ENSPPYG00000020553 I 0.895
ENSPPYG00000002212 Pongo pygmaeus ENSPPYG00000002212 I 0.829
ENSPPYG00000002397 Pongo pygmaeus ENSPPYG00000002397 N 0.734
ENSPPYG00000016121 Pongo pygmaeus ENSPPYG00000016121 I 0.910
HNRNPH2 Procavia capensis ENSPCAG00000003333 I 0.900
HNRNPH3 Procavia capensis ENSPCAG00000000111 N 0.705
HNRNPH1 Procavia capensis ENSPCAG00000006715 N 0.835
HNRNPF Procavia capensis ENSPCAG00000013169 I 0.833
HNRNPH3 Pteropus vampyrus ENSPVAG00000008037 N 0.734
HNRNPH1 Pteropus vampyrus ENSPVAG00000007670 I 0.719
HNRNPH2 Pteropus vampyrus ENSPVAG00000001571 I 0.900
HNRNPF Pteropus vampyrus ENSPVAG00000011646 I 0.843
Hnrnph3 Rattus norvegicus ENSRNOG00000026849 N 0.734
ENSRNOG00000015533 Rattus norvegicus ENSRNOG00000015533 I 0.733
Hnrnpf Rattus norvegicus ENSRNOG00000014562 I 0.833
Hnrnph2 Rattus norvegicus ENSRNOG00000011661 I 0.900
Hnrph1 Rattus norvegicus ENSRNOG00000003399 I 0.910
HNRNPH2 Sorex araneus ENSSARG00000014182 I 0.900
HNRNPH1 Sorex araneus ENSSARG00000003024 I 0.805
HNRNPF Sorex araneus ENSSARG00000010059 I 0.833
HNRNPH3 Sorex araneus ENSSARG00000013863 N 0.727
HNRNPH3 Spermophilus tridecemlineatus ENSSTOG00000011676 N 0.734
HNRNPF Sus scrofa ENSSSCG00000010203 I 0.829
HNRNPH1 Sus scrofa ENSSSCG00000014022 I 0.910
HNRNPH3 Sus scrofa ENSSSCG00000010238 N 0.734
HNRNPH1 Taeniopygia guttata ENSTGUG00000001085 I 0.810
HNRNPH3 Taeniopygia guttata ENSTGUG00000003609 N 0.727
HNRNPH3 Takifugu rubripes ENSTRUG00000005350 I 0.752
HNRNPH1 Takifugu rubripes ENSTRUG00000001031 I 0.929
HNRNPH2 Tarsius syrichta ENSTSYG00000007811 I 0.900
HNRNPH1 Tarsius syrichta ENSTSYG00000006417 I 0.814
HNRNPH3 Tetraodon nigroviridis ENSTNIG00000013788 I 0.757
HNRNPH1 Tursiops truncatus ENSTTRG00000000470 I 0.795
HNRNPH2 Tursiops truncatus ENSTTRG00000012786 I 0.900
HNRNPH3 Tursiops truncatus ENSTTRG00000013322 N 0.734
HNRNPH3 Vicugna pacos ENSVPAG00000011814 N 0.734
HNRNPH1 Vicugna pacos ENSVPAG00000007485 I 0.705
AAH82630 Xenopus laevis AAH82630 N 0.712
AAH77770 Xenopus laevis AAH77770 I 0.881
AAH70969 Xenopus laevis AAH70969 I 0.871
AAI10708 Xenopus laevis AAI10708 I 0.881
hnrnph3 Xenopus tropicalis ENSXETG00000023567 N 0.719
hnrnph2 Xenopus tropicalis ENSXETG00000018321 I 0.886