ELAVL2 (Procavia capensis)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSPCAG00000014998 T40406_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
ELAVL2
M330_0.6 		Homo sapiens RWUUUAUUUWR SELEX
Cook et al.(2011)
784_7972035 		0.925
ELAVL2
M329_0.6 		Homo sapiens RWUUUAUUUWR SELEX
Cook et al.(2011)
783_7972035 		0.925
ELAVL2
M328_0.6 		Homo sapiens MUYCUUUWUWUUY SELEX
Cook et al.(2011)
782_8497264 		0.925
ELAVL4
M315_0.6 		Homo sapiens Sequence logo not available UUUUUUUUUWAAA RIP-chip
Cook et al.(2011)
619_19846595.2 		0.882
ELAVL4
M314_0.6 		Homo sapiens Sequence logo not available KUUUGUUUKKUUU RIP-chip
Cook et al.(2011)
619_19846595.1 		0.882
ELAVL4
M313_0.6 		Homo sapiens Sequence logo not available CYCUCCYUCYCYC RIP-chip
Cook et al.(2011)
619_19846595 		0.882
ELAVL1
M031_0.6 		Homo sapiens UUDUUUU RNAcompete
Ray et al.(2013)
RNCMPT00032 		0.758
ELAVL1
M327_0.6 		Homo sapiens Sequence logo not available KKNWWDNNNUKNNUUNUNNH RIP-chip
Cook et al.(2011)
714_14981256 		0.758
ELAVL1
M232_0.6 		Homo sapiens UUUUUUK RNAcompete
Ray et al.(2013)
RNCMPT00274 		0.758
ELAVL1
M112_0.6 		Homo sapiens UUURKUU RNAcompete
Ray et al.(2013)
RNCMPT00117 		0.758
ELAVL1
M127_0.6 		Homo sapiens UUKRUUU RNAcompete
Ray et al.(2013)
RNCMPT00136 		0.758
ELAVL1
M108_0.6 		Homo sapiens UUWGUUU RNAcompete
Ray et al.(2013)
RNCMPT00112 		0.758
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSPCAP00000014024 RRM 69 139
ENSPCAP00000014024 RRM 155 223
ENSPCAP00000014024 RRM 306 376

Links

Other RRM family RBPs
Other Procavia capensis RBPs

170 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Ame_R009570 Ailuropoda melanoleuca Ame_R009570 I 0.853
Ame_R004766 Ailuropoda melanoleuca Ame_R004766 I 0.915
Ame_R009760 Ailuropoda melanoleuca Ame_R009760 I 0.873
Ame_R010167 Ailuropoda melanoleuca Ame_R010167 I 0.755
ELAVL4 Anolis carolinensis ENSACAG00000004527 I 0.873
ELAVL3 Anolis carolinensis ENSACAG00000016958 I 0.854
ELAVL2 Anolis carolinensis ENSACAG00000017521 I 0.911
amel4_ncbi_hmm5219 Apis mellifera amel4_ncbi_hmm5219 I 0.712
Q3ZCE2_BOVIN Bos taurus ENSBTAG00000000613 I 0.750
ELAVL3 Bos taurus ENSBTAG00000014412 I 0.853
A2VDK5_BOVIN Bos taurus ENSBTAG00000021046 I 0.873
fgenesh2_pg.scaffold_219000066 Branchiostoma floridae fgenesh2_pg.scaffold_219000066 I 0.728
ELAVL2 Callithrix jacchus ENSCJAG00000008064 I 0.915
ELAVL4 Callithrix jacchus ENSCJAG00000013725 I 0.873
ELAVL2 Canis familiaris ENSCAFG00000001688 I 0.915
ELAVL4 Canis familiaris ENSCAFG00000003927 I 0.873
ELAVL3 Canis familiaris ENSCAFG00000017350 I 0.853
ENSCAFG00000018353 Canis familiaris ENSCAFG00000018353 I 0.755
ENSCPOG00000022816 Cavia porcellus ENSCPOG00000022816 I 0.722
ENSCPOG00000002044 Cavia porcellus ENSCPOG00000002044 I 0.873
ELAVL2 Cavia porcellus ENSCPOG00000010472 I 0.915
ELAVL4 Choloepus hoffmanni ENSCHOG00000002464 I 0.873
ELAVL2 Choloepus hoffmanni ENSCHOG00000000635 I 0.769
elavl2 Danio rerio ENSDARG00000040732 I 0.883
elavl4 Danio rerio ENSDARG00000045639 I 0.865
hug Danio rerio ENSDARG00000016405 I 0.768
elavl3 Danio rerio ENSDARG00000014420 I 0.863
elavl1 Danio rerio ENSDARG00000038695 I 0.754
ELAVL4 Dasypus novemcinctus ENSDNOG00000002932 I 0.873
ELAVL1 Dasypus novemcinctus ENSDNOG00000008797 I 0.745
ELAVL2 Dasypus novemcinctus ENSDNOG00000016605 I 0.750
Elavl1 Dipodomys ordii ENSDORG00000009158 I 0.755
Elavl2 Dipodomys ordii ENSDORG00000010437 I 0.915
Elavl4 Dipodomys ordii ENSDORG00000012729 I 0.873
Elavl3 Dipodomys ordii ENSDORG00000002538 I 0.844
ELAVL4 Echinops telfairi ENSETEG00000013779 I 0.736
ELAVL2 Echinops telfairi ENSETEG00000006134 I 0.915
ELAVL2 Equus caballus ENSECAG00000020142 I 0.915
LOC100051268 Equus caballus ENSECAG00000022284 I 0.873
LOC100060819 Equus caballus ENSECAG00000019459 I 0.750
LOC100056901 Equus caballus ENSECAG00000020594 I 0.773
ELAVL4 Erinaceus europaeus ENSEEUG00000008766 I 0.873
ELAVL2 Erinaceus europaeus ENSEEUG00000008733 I 0.750
ELAVL1 Felis catus ENSFCAG00000014947 I 0.755
ELAVL2 Gallus gallus ENSGALG00000015799 I 0.892
Q9PW22_CHICK Gallus gallus ENSGALG00000010533 I 0.873
Q9PW24_CHICK Gallus gallus ENSGALG00000000726 I 0.750
ELAVL2 Gasterosteus aculeatus ENSGACG00000019484 I 0.892
ELAVL3 Gasterosteus aculeatus ENSGACG00000013839 I 0.863
ELAVL1 Gasterosteus aculeatus ENSGACG00000013329 I 0.706
ELAVL4 Gasterosteus aculeatus ENSGACG00000011152 I 0.869
ELAVL1 Gasterosteus aculeatus ENSGACG00000010657 I 0.748
ELAVL3 Gorilla gorilla ENSGGOG00000008635 I 0.853
ELAVL1 Gorilla gorilla ENSGGOG00000006100 I 0.755
ELAVL2 Gorilla gorilla ENSGGOG00000003678 I 0.915
ELAVL4 Gorilla gorilla ENSGGOG00000000634 I 0.873
ELAVL2 Homo sapiens ENSG00000107105 D 0.915
ELAVL4 Homo sapiens ENSG00000162374 D 0.873
ELAVL3 Homo sapiens ENSG00000196361 I 0.853
ELAVL1 Homo sapiens ENSG00000066044 D 0.755
fgenesh2_pg.C_sca_14000012 Lottia gigantea fgenesh2_pg.C_sca_14000012 I 0.703
ELAVL2 Loxodonta africana ENSLAFG00000009938 I 0.915
ELAVL1 Loxodonta africana ENSLAFG00000004219 I 0.755
ELAVL4 Loxodonta africana ENSLAFG00000001087 I 0.873
ELAVL3 Loxodonta africana ENSLAFG00000005013 I 0.853
ELAVL4 Macaca mulatta ENSMMUG00000021933 I 0.873
LOC708195 Macaca mulatta ENSMMUG00000010038 I 0.915
ELAVL1 Macaca mulatta ENSMMUG00000006544 I 0.755
ELAVL3 Macropus eugenii ENSMEUG00000016706 I 0.854
ELAVL4 Macropus eugenii ENSMEUG00000007145 I 0.873
ELAVL2 Macropus eugenii ENSMEUG00000006499 I 0.829
ELAVL4 Meleagris gallopavo ENSMGAG00000010928 I 0.873
ELAVL1 Meleagris gallopavo ENSMGAG00000001015 I 0.750
ELAVL1 Microcebus murinus ENSMICG00000009699 I 0.755
ELAVL4 Microcebus murinus ENSMICG00000003286 I 0.873
ELAVL2 Microcebus murinus ENSMICG00000001558 I 0.744
ELAVL3 Monodelphis domestica ENSMODG00000006653 I 0.825
ELAVL1 Monodelphis domestica ENSMODG00000005041 I 0.755
LOC100015949 Monodelphis domestica ENSMODG00000003936 I 0.911
ELAVL4 Monodelphis domestica ENSMODG00000001300 I 0.873
Elavl1 Mus musculus ENSMUSG00000040028 I 0.755
Elavl2 Mus musculus ENSMUSG00000008489 I 0.915
Elavl3 Mus musculus ENSMUSG00000003410 I 0.844
Elavl4 Mus musculus ENSMUSG00000028546 I 0.873
ELAVL4 Myotis lucifugus ENSMLUG00000006226 I 0.873
ELAVL1 Myotis lucifugus ENSMLUG00000008101 I 0.759
ELAVL2 Myotis lucifugus ENSMLUG00000014210 I 0.911
nasonia_NCBI_hmm330804 Nasonia vitripennis nasonia_NCBI_hmm330804 I 0.717
ELAVL4 Ochotona princeps ENSOPRG00000015300 I 0.873
ELAVL1 Ochotona princeps ENSOPRG00000009691 I 0.764
ELAVL2 Ochotona princeps ENSOPRG00000012874 I 0.915
ELAVL2 Ornithorhynchus anatinus ENSOANG00000009634 I 0.863
ELAVL4 Oryctolagus cuniculus ENSOCUG00000016262 I 0.873
ELAVL2 Oryctolagus cuniculus ENSOCUG00000005891 I 0.915
D7R608_RABIT Oryctolagus cuniculus ENSOCUG00000015871 I 0.764
ELAVL3 Oryzias latipes ENSORLG00000005379 I 0.854
ELAVL1 Oryzias latipes ENSORLG00000012435 I 0.755
ELAVL2 Oryzias latipes ENSORLG00000004217 I 0.901
ELAVL1 Oryzias latipes ENSORLG00000000087 I 0.701
ELAVL4 Oryzias latipes ENSORLG00000017130 I 0.869
ELAVL3 Otolemur garnettii ENSOGAG00000007072 I 0.853
ELAVL1 Otolemur garnettii ENSOGAG00000012877 I 0.755
ELAVL2 Otolemur garnettii ENSOGAG00000016228 I 0.764
ELAVL4 Otolemur garnettii ENSOGAG00000016990 I 0.873
ELAVL1 Pan troglodytes ENSPTRG00000010413 I 0.755
ELAVL4 Pan troglodytes ENSPTRG00000000723 I 0.873
ELAVL2 Pan troglodytes ENSPTRG00000020830 I 0.915
ELAVL3 Pan troglodytes ENSPTRG00000010506 I 0.848
ENSPPYG00000009496 Pongo pygmaeus ENSPPYG00000009496 I 0.755
ENSPPYG00000001367 Pongo pygmaeus ENSPPYG00000001367 I 0.873
ENSPPYG00000019166 Pongo pygmaeus ENSPPYG00000019166 I 0.915
ELAVL4 Procavia capensis ENSPCAG00000008215 I 0.873
ELAVL3 Pteropus vampyrus ENSPVAG00000014893 I 0.853
ELAVL4 Pteropus vampyrus ENSPVAG00000003632 I 0.820
ELAVL2 Pteropus vampyrus ENSPVAG00000002688 I 0.915
Elavl3 Rattus norvegicus ENSRNOG00000013752 I 0.844
Elavl4 Rattus norvegicus ENSRNOG00000023601 I 0.873
Elavl1 Rattus norvegicus ENSRNOG00000001069 I 0.755
Elavl2 Rattus norvegicus ENSRNOG00000006853 I 0.915
ELAVL3 Sorex araneus ENSSARG00000005949 I 0.768
ELAVL2 Sorex araneus ENSSARG00000005702 I 0.915
ELAVL4 Sorex araneus ENSSARG00000010733 I 0.873
ELAVL2 Spermophilus tridecemlineatus ENSSTOG00000007792 I 0.725
ELAVL4 Spermophilus tridecemlineatus ENSSTOG00000002834 I 0.791
ELAVL1 Spermophilus tridecemlineatus ENSSTOG00000009130 I 0.741
ELAVL2 Sus scrofa ENSSSCG00000005130 I 0.915
ELAVL1 Sus scrofa ENSSSCG00000013592 I 0.759
ELAVL3 Sus scrofa ENSSSCG00000013617 I 0.853
ELAVL2 Taeniopygia guttata ENSTGUG00000001349 I 0.887
ELAVL1 Taeniopygia guttata ENSTGUG00000000118 I 0.750
ELAVL4 Taeniopygia guttata ENSTGUG00000008597 I 0.873
ELAVL3 Takifugu rubripes ENSTRUG00000010719 I 0.863
ELAVL2 Takifugu rubripes ENSTRUG00000007867 I 0.896
ELAVL1 Takifugu rubripes ENSTRUG00000004559 I 0.725
ELAVL4 Takifugu rubripes ENSTRUG00000000523 I 0.864
ELAVL4 Tarsius syrichta ENSTSYG00000004130 I 0.873
ELAVL1 Tarsius syrichta ENSTSYG00000008248 I 0.755
ELAVL2 Tarsius syrichta ENSTSYG00000013066 I 0.900
ELAVL1 Tetraodon nigroviridis ENSTNIG00000019823 I 0.726
ELAVL3 Tetraodon nigroviridis ENSTNIG00000018572 I 0.850
ELAVL2 Tetraodon nigroviridis ENSTNIG00000011312 I 0.892
ELAVL4 Tetraodon nigroviridis ENSTNIG00000015485 I 0.864
ELAVL3 Tupaia belangeri ENSTBEG00000006133 I 0.716
ELAVL4 Tupaia belangeri ENSTBEG00000011730 I 0.736
ELAVL2 Tupaia belangeri ENSTBEG00000017759 I 0.782
ELAVL3 Tursiops truncatus ENSTTRG00000001789 I 0.853
ELAVL2 Tursiops truncatus ENSTTRG00000011656 I 0.911
ELAVL4 Vicugna pacos ENSVPAG00000011606 I 0.873
ELAVL2 Vicugna pacos ENSVPAG00000005109 I 0.915
AAI16460 Xenopus laevis AAI16460 I 0.716
AAI69769 Xenopus laevis AAI69769 I 0.854
AAI70539 Xenopus laevis AAI70539 I 0.911
CAA59430 Xenopus laevis CAA59430 I 0.906
CBF67567 Xenopus laevis CBF67567 I 0.869
Q91584 Xenopus laevis Q91584 I 0.854
Q5U259 Xenopus laevis Q5U259 I 0.745
Q1JQ73 Xenopus laevis Q1JQ73 I 0.716
CBU92440 Xenopus laevis CBU92440 I 0.869
AAH99348 Xenopus laevis AAH99348 I 0.869
AAH94189 Xenopus laevis AAH94189 I 0.911
AAA96942 Xenopus laevis AAA96942 I 0.750
AAA96943 Xenopus laevis AAA96943 I 0.911
AAA96944 Xenopus laevis AAA96944 I 0.854
AAA96945 Xenopus laevis AAA96945 I 0.869
AAH86269 Xenopus laevis AAH86269 I 0.745
Q91903 Xenopus laevis Q91903 I 0.911
elavl3 Xenopus tropicalis ENSXETG00000016741 I 0.850
elavl2 Xenopus tropicalis ENSXETG00000009387 I 0.750
elavl1 Xenopus tropicalis ENSXETG00000008752 I 0.750
elavl4 Xenopus tropicalis ENSXETG00000008680 I 0.869