NCBP2 (Takifugu rubripes)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSTRUG00000018355 T42387_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSTRUP00000046974 RRM 42 112

Links

Other RRM family RBPs
Other Takifugu rubripes RBPs

104 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
DGIL_AUG5s12516g4t1 Acyrtosiphon pisum DGIL_AUG5s12516g4t1 N 0.761
DGIL_AUG5s15103g4t1 Acyrtosiphon pisum DGIL_AUG5s15103g4t1 N 0.732
NCBP2_AEDAE Aedes aegypti AAEL006135 N 0.775
Ame_R004608 Ailuropoda melanoleuca Ame_R004608 N 0.873
Aqu1.228507 Amphimedon queenslandica Aqu1.228507 N 0.704
ENSACAG00000015128 Anolis carolinensis ENSACAG00000015128 N 0.859
NCBP2_ANOGA Anopheles gambiae AGAP002547 N 0.817
amel4_ncbi_hmm3188 Apis mellifera amel4_ncbi_hmm3188 N 0.817
BGIBMGA007585 Bombyx mori BGIBMGA007585 N 0.761
NCBP2_BOVIN Bos taurus ENSBTAG00000008873 N 0.873
gw.93.114.1 Branchiostoma floridae gw.93.114.1 N 0.775
gw.81.90.1 Branchiostoma floridae gw.81.90.1 N 0.775
Bm1_02935 Brugia malayi Bm1_02935 N 0.761
LOC100404338 Callithrix jacchus ENSCJAG00000013735 N 0.873
NCBP2 Canis familiaris ENSCAFG00000013100 N 0.873
NCBP2L Canis familiaris ENSCAFG00000017990 N 0.718
estExt_Genewise1.C_5160046 Capitella teleta estExt_Genewise1.C_5160046 N 0.789
NCBP2 Cavia porcellus ENSCPOG00000002976 N 0.873
ENSCHOG00000005967 Choloepus hoffmanni ENSCHOG00000005967 N 0.859
ENSCING00000016926 Ciona intestinalis ENSCING00000016926 N 0.746
ENSCING00000003079 Ciona intestinalis ENSCING00000003079 N 0.746
ENSCSAVG00000005823 Ciona savignyi ENSCSAVG00000005823 N 0.718
CpipJ_CPIJ003555 Culex pipiens CpipJ_CPIJ003555 N 0.761
NCBP2_CULQU Culex quinquefasciatus CPIJ003555 N 0.761
ncbp2 Danio rerio ENSDARG00000014898 N 0.930
estExt_fgenesh1_kg.C_1730002 Daphnia pulex estExt_fgenesh1_kg.C_1730002 N 0.761
GF16759 Drosophila ananassae FBgn0093780 N 0.817
GG22670 Drosophila erecta FBgn0114835 N 0.803
GH15101 Drosophila grimshawi FBgn0122576 N 0.817
Cbp20 Drosophila melanogaster FBgn0022943 N 0.789
GI23717 Drosophila mojavensis FBgn0146442 N 0.817
GL12592 Drosophila persimilis FBgn0150198 N 0.789
GA11577-RA Drosophila pseudoobscura FBgn0071628 N 0.789
GM15280 Drosophila sechellia FBgn0170200 N 0.789
GD19204 Drosophila simulans FBgn0190709 N 0.789
GJ18756 Drosophila virilis FBgn0205908 N 0.775
GJ23276 Drosophila virilis FBgn0210378 N 0.817
GK11244 Drosophila willistoni FBgn0213255 N 0.803
GE25514 Drosophila yakuba FBgn0242580 N 0.789
NCBP2L Equus caballus ENSECAG00000003478 N 0.761
NCBP2 Equus caballus ENSECAG00000016153 N 0.873
NCBP2 Gallus gallus ENSGALG00000006843 N 0.873
NCBP2_CHICK Gallus gallus ENSGALG00000005753 N 0.859
NCBP2 Gasterosteus aculeatus ENSGACG00000006238 N 0.930
91084 Helobdella robusta 91084 N 0.817
NCBP2 Homo sapiens ENSG00000114503 N 0.873
XP_002166119.1 Hydra magnipapillata XP_002166119.1 N 0.817
XP_002160076.1 Hydra magnipapillata XP_002160076.1 N 0.803
NCBP2_IXOSC Ixodes scapularis ISCW017479 N 0.761
LOAG_03270 Loa loa LOAG_03270 N 0.775
estExt_Genewise1.C_sca_180152 Lottia gigantea estExt_Genewise1.C_sca_180152 N 0.803
NCBP2L Loxodonta africana ENSLAFG00000027581 N 0.775
NCBP2 Loxodonta africana ENSLAFG00000006372 N 0.859
NCBP2 Macaca mulatta ENSMMUG00000007825 N 0.873
ENSMEUG00000004730 Macropus eugenii ENSMEUG00000004730 N 0.873
ENSMEUG00000008126 Macropus eugenii ENSMEUG00000008126 N 0.887
ENSMGAG00000002257 Meleagris gallopavo ENSMGAG00000002257 N 0.859
ENSMGAG00000006728 Meleagris gallopavo ENSMGAG00000006728 N 0.873
NCBP2 Microcebus murinus ENSMICG00000003162 N 0.873
XM_001371285.1 Monodelphis domestica ENSMODG00000023276 N 0.887
LOC100020122 Monodelphis domestica ENSMODG00000024608 N 0.859
XM_001367531.1 Monodelphis domestica ENSMODG00000024607 N 0.859
XM_001373408.1 Monodelphis domestica ENSMODG00000015908 N 0.859
Ncbp2 Mus musculus ENSMUSG00000022774 N 0.873
NCBP2 Myotis lucifugus ENSMLUG00000017500 N 0.873
nasonia_NCBI_hmm1532803 Nasonia vitripennis nasonia_NCBI_hmm1532803 N 0.831
nasonia_NCBI_hmm134534 Nasonia vitripennis nasonia_NCBI_hmm134534 N 0.803
estExt_gwp.C_920142 Nematostella vectensis estExt_gwp.C_920142 N 0.761
ENSOPRG00000007634 Ochotona princeps ENSOPRG00000007634 N 0.873
SNAPOd2T00014922001 Oikopleura dioica SNAPOd2T00014922001 N 0.704
ENSOCUG00000014372 Oryctolagus cuniculus ENSOCUG00000014372 N 0.873
NCBP2 Oryctolagus cuniculus ENSOCUG00000006738 N 0.887
NCBP2 Oryzias latipes ENSORLG00000011235 N 0.930
NCBP2 Otolemur garnettii ENSOGAG00000005009 N 0.873
NCBP2 Pan troglodytes ENSPTRG00000015789 N 0.873
PHUM535920 Pediculus humanus PHUM535920 N 0.789
ENSPPYG00000014449 Pongo pygmaeus ENSPPYG00000014449 N 0.873
Ppa-ncbp-2 Pristionchus pacificus PPA17381 N 0.746
NCBP2 Procavia capensis ENSPCAG00000003219 N 0.873
NCBP2 Pteropus vampyrus ENSPVAG00000017273 N 0.859
Pigz Rattus norvegicus ENSRNOG00000001746 N 0.873
Sjc_0008080 Schistosoma japonicum Sjc_0008080 N 0.718
NCBP2 Sorex araneus ENSSARG00000014294 N 0.789
ENSSTOG00000001584 Spermophilus tridecemlineatus ENSSTOG00000001584 N 0.887
SPPG_00516 Spizellomyces punctatus SPPG_00516 N 0.732
ENSSSCG00000011835 Sus scrofa ENSSSCG00000011835 N 0.873
NCBP2L Sus scrofa ENSSSCG00000012562 N 0.746
ENSSSCG00000011840 Sus scrofa ENSSSCG00000011840 N 0.873
B5G279_TAEGU Taeniopygia guttata ENSTGUG00000007323 N 0.873
NCBP2 Taeniopygia guttata ENSTGUG00000008864 N 0.859
NCBP2 Tetraodon nigroviridis ENSTNIG00000006065 N 0.986
estExt_Genewise1Plus.C_150343 Trichoderma atroviride estExt_Genewise1Plus.C_150343 N 0.704
e_gw1.17.191.1 Trichoderma reesei e_gw1.17.191.1 N 0.718
e_gw1.10.746.1 Trichoderma virens e_gw1.10.746.1 N 0.704
e_gw1.1.927.1 Trichoplax adhaerens e_gw1.1.927.1 N 0.704
NCBP2 Tupaia belangeri ENSTBEG00000015222 N 0.873
NCBP2 Tursiops truncatus ENSTTRG00000013908 N 0.873
NCBP2 Vicugna pacos ENSVPAG00000010369 N 0.859
WUBG_16568 Wuchereria bancrofti WUBG_16568 N 0.775
2118330B Xenopus laevis 2118330B N 0.901
AAH72902 Xenopus laevis AAH72902 N 0.915
CAA59259 Xenopus laevis CAA59259 N 0.901
P52299 Xenopus laevis P52299 N 0.915
ncbp2 Xenopus tropicalis ENSXETG00000019384 N 0.887