MEX3C (Danio rerio)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 ENSDARG00000068971 T18634_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
CG11360
M122_0.6 		Drosophila melanogaster GAGUDW RNAcompete
Ray et al.(2013)
RNCMPT00129 		0.702
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSDARP00000090749 KH 1 38
ENSDARP00000090749 KH 72 131

Links

Other KH family RBPs
Other Danio rerio RBPs

136 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
A1L3F4 Xenopus laevis A1L3F4 I 0.777
AAEL012708 Aedes aegypti AAEL012708 I 0.000
AAI28670 Xenopus laevis AAI28670 I 0.792
AAI30070 Xenopus laevis AAI30070 I 0.777
AAI30114 Xenopus laevis AAI30114 I 0.752
AAI30196 Xenopus laevis AAI30196 I 0.000
AAI33220 Xenopus laevis AAI33220 I 0.752
AAI42552 Xenopus laevis AAI42552 I 0.760
AGAP013259 Anopheles gambiae AGAP013259 I 0.000
amel4_ncbi_hmm6985 Apis mellifera amel4_ncbi_hmm6985 I 0.736
Ame_R004658 Ailuropoda melanoleuca Ame_R004658 I 0.777
Ame_R007174 Ailuropoda melanoleuca Ame_R007174 I 0.785
Ame_R015561 Ailuropoda melanoleuca Ame_R015561 I 0.000
Aqu1.215178 Amphimedon queenslandica Aqu1.215178 I 0.000
BAH79688 Xenopus laevis BAH79688 I 0.777
CBG05100 Caenorhabditis briggsae CBG05100 I 0.000
CBN20397 Caenorhabditis brenneri CBN20397 I 0.000
CBN24563 Caenorhabditis brenneri CBN24563 I 0.000
CJA18034 Caenorhabditis japonica CJA18034 I 0.000
CPIJ010634 Culex quinquefasciatus CPIJ010634 I 0.000
CpipJ_CPIJ010634 Culex pipiens CpipJ_CPIJ010634 I 0.000
CRE03823 Caenorhabditis remanei CRE03823 I 0.000
MEX3A Anolis carolinensis ENSACAG00000003739 N 0.816
MEX3C Anolis carolinensis ENSACAG00000010265 I 0.922
MEX3B Anolis carolinensis ENSACAG00000011072 I 0.922
Q2YDI4_BOVIN Bos taurus ENSBTAG00000014886 I 0.922
MEX3B Bos taurus ENSBTAG00000016630 I 0.785
MEX3A Bos taurus ENSBTAG00000019158 I 0.000
MEX3C Canis familiaris ENSCAFG00000000162 I 0.783
MEX3B Canis familiaris ENSCAFG00000013759 I 0.931
MEX3C Choloepus hoffmanni ENSCHOG00000004915 I 0.777
ENSCING00000002603 Ciona intestinalis ENSCING00000002603 I 0.736
LOC100410023 Callithrix jacchus ENSCJAG00000001902 I 0.777
LOC100410413 Callithrix jacchus ENSCJAG00000007711 I 0.000
MEX3B Callithrix jacchus ENSCJAG00000008043 I 0.785
ENSCPOG00000008241 Cavia porcellus ENSCPOG00000008241 I 0.779
MEX3C Cavia porcellus ENSCPOG00000009646 I 0.777
MEX3A Cavia porcellus ENSCPOG00000020219 I 0.000
MEX3B Cavia porcellus ENSCPOG00000023663 I 0.760
MEX3B Danio rerio ENSDARG00000058369 I 0.777
MEX3A Danio rerio ENSDARG00000076638 I 0.000
MEX3C Dasypus novemcinctus ENSDNOG00000006544 I 0.777
MEX3B Dasypus novemcinctus ENSDNOG00000012736 I 0.782
Mex3a Dipodomys ordii ENSDORG00000002921 I 0.000
Mex3c Dipodomys ordii ENSDORG00000007962 I 0.931
LOC100063974 Equus caballus ENSECAG00000007279 N 0.814
MEX3B Equus caballus ENSECAG00000013497 I 0.785
MEX3C Equus caballus ENSECAG00000021727 I 0.777
MEX3C Erinaceus europaeus ENSEEUG00000010864 I 0.931
MEX3C Echinops telfairi ENSETEG00000003647 I 0.941
MEX3C Homo sapiens ENSG00000176624 I 0.777
MEX3D Homo sapiens ENSG00000181588 I 0.760
MEX3B Homo sapiens ENSG00000183496 I 0.785
MEX3C Gasterosteus aculeatus ENSGACG00000007490 I 0.769
MEX3B Gasterosteus aculeatus ENSGACG00000012530 I 0.744
MEX3A Gasterosteus aculeatus ENSGACG00000013282 N 0.822
MEX3D Gasterosteus aculeatus ENSGACG00000015299 I 0.760
MEX3D Gallus gallus ENSGALG00000001106 I 0.922
MEX3A Gallus gallus ENSGALG00000014016 N 0.816
MEX3B Gorilla gorilla ENSGGOG00000000597 I 0.785
MEX3D Gorilla gorilla ENSGGOG00000001083 I 0.760
MEX3A Gorilla gorilla ENSGGOG00000004513 I 0.000
MEX3C Gorilla gorilla ENSGGOG00000014875 I 0.777
MEX3B Loxodonta africana ENSLAFG00000006027 I 0.931
MEX3A Loxodonta africana ENSLAFG00000009220 N 0.814
MEX3C Loxodonta africana ENSLAFG00000027818 I 0.777
MEX3B Macropus eugenii ENSMEUG00000002402 I 0.777
MEX3C Macropus eugenii ENSMEUG00000015929 I 0.931
MEX3D Macropus eugenii ENSMEUG00000016404 I 0.777
MEX3D Meleagris gallopavo ENSMGAG00000002325 I 0.922
MEX3A Meleagris gallopavo ENSMGAG00000015563 N 0.816
MEX3A Microcebus murinus ENSMICG00000002233 I 0.000
MEX3C Microcebus murinus ENSMICG00000005815 I 0.931
MEX3A Myotis lucifugus ENSMLUG00000010185 N 0.822
MEX3C Myotis lucifugus ENSMLUG00000012585 I 0.931
MEX3B Macaca mulatta ENSMMUG00000018639 I 0.785
MEX3A Macaca mulatta ENSMMUG00000022307 I 0.000
MEX3C Macaca mulatta ENSMMUG00000023652 I 0.777
MEX3D Monodelphis domestica ENSMODG00000004116 I 0.777
MEX3C Monodelphis domestica ENSMODG00000011001 I 0.777
MEX3A Monodelphis domestica ENSMODG00000016954 I 0.000
MEX3B Monodelphis domestica ENSMODG00000019387 I 0.931
Mex3c Mus musculus ENSMUSG00000037253 I 0.777
Mex3d Mus musculus ENSMUSG00000048696 I 0.760
Mex3b Mus musculus ENSMUSG00000057706 I 0.931
MEX3C Ornithorhynchus anatinus ENSOANG00000008116 I 0.922
MEX3D Ornithorhynchus anatinus ENSOANG00000011764 I 0.744
MEX3B Oryctolagus cuniculus ENSOCUG00000011603 I 0.931
ENSOCUG00000012549 Oryctolagus cuniculus ENSOCUG00000012549 I 0.777
ENSOCUG00000014295 Oryctolagus cuniculus ENSOCUG00000014295 I 0.000
MEX3A Ochotona princeps ENSOPRG00000002937 I 0.000
MEX3B Ochotona princeps ENSOPRG00000009604 I 0.785
MEX3C Oryzias latipes ENSORLG00000004985 I 0.785
MEX3C Procavia capensis ENSPCAG00000009258 I 0.785
MEX3B Procavia capensis ENSPCAG00000014150 I 0.941
ENSPPYG00000000729 Pongo pygmaeus ENSPPYG00000000729 I 0.000
ENSPPYG00000006723 Pongo pygmaeus ENSPPYG00000006723 I 0.785
ENSPPYG00000009324 Pongo pygmaeus ENSPPYG00000009324 I 0.760
MEX3B Pan troglodytes ENSPTRG00000007373 I 0.785
MEX3C Pan troglodytes ENSPTRG00000010029 I 0.777
MEX3D Pan troglodytes ENSPTRG00000010208 I 0.760
MEX3A Pan troglodytes ENSPTRG00000030373 N 0.822
MEX3B Pteropus vampyrus ENSPVAG00000000093 I 0.785
MEX3A Pteropus vampyrus ENSPVAG00000010333 I 0.709
MEX3C Pteropus vampyrus ENSPVAG00000015135 I 0.777
Mex3c Rattus norvegicus ENSRNOG00000015777 I 0.777
D3ZFL6_RAT Rattus norvegicus ENSRNOG00000025142 I 0.931
Mex3d Rattus norvegicus ENSRNOG00000030830 I 0.760
MEX3B Sorex araneus ENSSARG00000006007 I 0.941
MEX3C Sorex araneus ENSSARG00000006940 I 0.931
MEX3A Sorex araneus ENSSARG00000009868 N 0.822
MEX3C Tupaia belangeri ENSTBEG00000014438 I 0.931
MEX3D Taeniopygia guttata ENSTGUG00000000201 I 0.785
MEX3A Taeniopygia guttata ENSTGUG00000003692 N 0.808
MEX3B Tetraodon nigroviridis ENSTNIG00000003398 I 0.769
MEX3A Tetraodon nigroviridis ENSTNIG00000004473 N 0.798
MEX3D Tetraodon nigroviridis ENSTNIG00000015325 I 0.769
MEX3B Takifugu rubripes ENSTRUG00000000367 I 0.903
MEX3A Takifugu rubripes ENSTRUG00000007796 N 0.798
MEX3D Takifugu rubripes ENSTRUG00000007986 I 0.921
MEX3C Takifugu rubripes ENSTRUG00000011888 I 0.895
MEX3C Tursiops truncatus ENSTTRG00000004570 I 0.777
MEX3D Tursiops truncatus ENSTTRG00000008132 I 0.760
MEX3A Tursiops truncatus ENSTTRG00000013346 I 0.000
MEX3C Vicugna pacos ENSVPAG00000003137 I 0.931
mex3a Xenopus tropicalis ENSXETG00000012704 N 0.816
mex3c Xenopus tropicalis ENSXETG00000022367 I 0.792
estExt_fgenesh2_pg.C_2010087 Branchiostoma floridae estExt_fgenesh2_pg.C_2010087 I 0.793
estExt_Genewise1.C_sca_540218 Lottia gigantea estExt_Genewise1.C_sca_540218 I 0.752
e_gw1.15.409.1 Daphnia pulex e_gw1.15.409.1 I 0.719
e_gw1.3.1475.1 Trichoplax adhaerens e_gw1.3.1475.1 I 0.853
mex-3 Caenorhabditis elegans F53G12.5 I 0.000
CG11360 Drosophila melanogaster FBgn0039920 D 0.702
GA10947-RA Drosophila pseudoobscura FBgn0071003 I 0.702
GF20555 Drosophila ananassae FBgn0097561 I 0.000
GG16398 Drosophila erecta FBgn0108630 I 0.702
GH23938 Drosophila grimshawi FBgn0131395 I 0.702
GL18139 Drosophila persimilis FBgn0155742 I 0.702
GM26809 Drosophila sechellia FBgn0181661 I 0.702
GD24410 Drosophila simulans FBgn0195748 I 0.702
GJ18673 Drosophila virilis FBgn0205827 I 0.702
GK13594 Drosophila willistoni FBgn0215602 I 0.702
GE14558 Drosophila yakuba FBgn0232157 I 0.702
gw.320.9.1 Nematostella vectensis gw.320.9.1 I 0.719
nasonia_NCBI_hmm456104 Nasonia vitripennis nasonia_NCBI_hmm456104 I 0.736
SNAPOd2T00016811001 Oikopleura dioica SNAPOd2T00016811001 I 0.000
XP_001175528.1 Strongylocentrotus purpuratus XP_001175528.1 I 0.727
XP_002168292.1 Hydra magnipapillata XP_002168292.1 I 0.702
XP_786425.2 Strongylocentrotus purpuratus XP_786425.2 I 0.727