Ame_R011627 (Ailuropoda melanoleuca)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 Ame_R011627 T21593_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
PCBP2
M043_0.6 		Homo sapiens CCYYCCH RNAcompete
Ray et al.(2013)
RNCMPT00044 		0.899
pcbp2
M211_0.6 		Danio rerio WWUCCC RNAcompete
Ray et al.(2013)
RNCMPT00246 		0.856
Pcbp1
M207_0.6 		Mus musculus CYUUCC RNAcompete
Ray et al.(2013)
RNCMPT00239 		0.835
PCBP1
M177_0.6 		Homo sapiens CCWWHCC RNAcompete
Ray et al.(2013)
RNCMPT00186 		0.835
Pcbp3
M188_0.6 		Mus musculus UUUYCC RNAcompete
Ray et al.(2013)
RNCMPT00215 		0.782
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
Ame_R011627 KH 1 45
Ame_R011627 KH 69 131
Ame_R011627 KH 255 317

Links

Other KH family RBPs
Other Ailuropoda melanoleuca RBPs

99 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AAH41241 Xenopus laevis AAH41241 I 0.883
AAH84195 Xenopus laevis AAH84195 I 0.883
Ame_R002707 Ailuropoda melanoleuca Ame_R002707 I 0.835
CAB50743 Xenopus laevis CAB50743 I 0.883
CAD29864 Xenopus laevis CAD29864 I 0.883
ENSACAG00000000783 Anolis carolinensis ENSACAG00000000783 I 0.899
PCBP3 Anolis carolinensis ENSACAG00000004607 I 0.782
ENSACAG00000009819 Anolis carolinensis ENSACAG00000009819 I 0.782
PCBP4 Anolis carolinensis ENSACAG00000011701 I 0.000
PCBP1_BOVIN Bos taurus ENSBTAG00000008985 I 0.835
PCBP4_BOVIN Bos taurus ENSBTAG00000018622 I 0.000
Q3SYT9_BOVIN Bos taurus ENSBTAG00000020757 I 0.899
Q17QV0_BOVIN Bos taurus ENSBTAG00000030775 I 0.771
PCBP2 Canis familiaris ENSCAFG00000006821 I 0.899
PCBP4 Canis familiaris ENSCAFG00000010019 I 0.000
LOC100408015 Callithrix jacchus ENSCJAG00000001903 I 0.782
A6MK33_CALJA Callithrix jacchus ENSCJAG00000005783 I 0.000
LOC100392590 Callithrix jacchus ENSCJAG00000018590 I 0.930
ENSCJAG00000034075 Callithrix jacchus ENSCJAG00000034075 I 0.894
ENSCPOG00000000967 Cavia porcellus ENSCPOG00000000967 I 0.899
PCBP3 Cavia porcellus ENSCPOG00000003648 I 0.782
PCBP1 Cavia porcellus ENSCPOG00000013511 I 0.835
PCBP4 Cavia porcellus ENSCPOG00000014617 I 0.000
pcbp2 Danio rerio ENSDARG00000013184 D 0.856
PCBP2 Dasypus novemcinctus ENSDNOG00000008688 I 0.899
Pcbp4 Dipodomys ordii ENSDORG00000000573 N 0.000
LOC100050579 Equus caballus ENSECAG00000002544 I 0.835
LOC100050101 Equus caballus ENSECAG00000012413 I 0.782
PCBP2 Equus caballus ENSECAG00000022389 I 0.899
PCBP4 Homo sapiens ENSG00000090097 I 0.000
PCBP1 Homo sapiens ENSG00000169564 D 0.835
PCBP3 Homo sapiens ENSG00000183570 I 0.782
PCBP2 Homo sapiens ENSG00000197111 D 0.942
PCBP3 Gasterosteus aculeatus ENSGACG00000002266 I 0.771
PCBP4 Gasterosteus aculeatus ENSGACG00000002664 I 0.000
ENSGACG00000003044 Gasterosteus aculeatus ENSGACG00000003044 I 0.000
ENSGACG00000006681 Gasterosteus aculeatus ENSGACG00000006681 I 0.846
PCBP3 Gasterosteus aculeatus ENSGACG00000014955 I 0.771
PCBP3 Gallus gallus ENSGALG00000004394 I 0.745
PCBP3 Gallus gallus ENSGALG00000013155 I 0.787
PCBP3 Gorilla gorilla ENSGGOG00000003683 I 0.782
PCBP4 Gorilla gorilla ENSGGOG00000012474 I 0.000
PCBP2 Gorilla gorilla ENSGGOG00000012613 I 0.899
PCBP1 Gorilla gorilla ENSGGOG00000028130 I 0.835
PCBP4 Loxodonta africana ENSLAFG00000010732 N 0.000
ENSLAFG00000013187 Loxodonta africana ENSLAFG00000013187 I 0.899
PCBP3 Macropus eugenii ENSMEUG00000012960 I 0.739
PCBP3 Meleagris gallopavo ENSMGAG00000001883 I 0.782
ENSMGAG00000006794 Meleagris gallopavo ENSMGAG00000006794 I 0.791
PCBP2 Microcebus murinus ENSMICG00000011651 I 0.899
PCBP1 Myotis lucifugus ENSMLUG00000014173 I 0.835
PCBP3 Macaca mulatta ENSMMUG00000003825 I 0.782
PCBP2 Macaca mulatta ENSMMUG00000006608 I 0.923
PCBP4 Macaca mulatta ENSMMUG00000022205 I 0.000
ENSMODG00000000280 Monodelphis domestica ENSMODG00000000280 I 0.899
PCBP4 Monodelphis domestica ENSMODG00000011790 I 0.000
Pcbp3 Mus musculus ENSMUSG00000001120 D 0.782
Pcbp4 Mus musculus ENSMUSG00000023495 I 0.000
Pcbp1 Mus musculus ENSMUSG00000051695 D 0.835
Pcbp2 Mus musculus ENSMUSG00000056851 I 0.899
PCBP4 Ornithorhynchus anatinus ENSOANG00000014110 I 0.000
PCBP3 Oryctolagus cuniculus ENSOCUG00000002696 I 0.782
PCBP1_RABIT Oryctolagus cuniculus ENSOCUG00000003634 I 0.835
ENSOCUG00000022490 Oryctolagus cuniculus ENSOCUG00000022490 I 0.899
PCBP4 Oryctolagus cuniculus ENSOCUG00000025336 I 0.000
PCBP2 Ochotona princeps ENSOPRG00000004680 I 0.899
PCBP3 Oryzias latipes ENSORLG00000000059 I 0.741
PCBP4 Oryzias latipes ENSORLG00000003061 I 0.000
ENSORLG00000005176 Oryzias latipes ENSORLG00000005176 I 0.856
ENSORLG00000012872 Oryzias latipes ENSORLG00000012872 I 0.856
ENSORLG00000014385 Oryzias latipes ENSORLG00000014385 I 0.707
PCBP2 Procavia capensis ENSPCAG00000005154 I 0.899
ENSPPYG00000004581 Pongo pygmaeus ENSPPYG00000004581 I 0.899
ENSPPYG00000012328 Pongo pygmaeus ENSPPYG00000012328 I 0.835
ENSPPYG00000013822 Pongo pygmaeus ENSPPYG00000013822 I 0.000
PCBP2 Pan troglodytes ENSPTRG00000005018 I 0.899
PCBP1 Pan troglodytes ENSPTRG00000012025 I 0.835
PCBP3 Pan troglodytes ENSPTRG00000014010 I 0.782
PCBP4 Pan troglodytes ENSPTRG00000014983 I 0.000
PCBP2 Pteropus vampyrus ENSPVAG00000012284 I 0.899
Pcbp3 Rattus norvegicus ENSRNOG00000001245 I 0.782
Pcbp4 Rattus norvegicus ENSRNOG00000012406 I 0.000
Pcbp1 Rattus norvegicus ENSRNOG00000017708 I 0.835
D3ZWQ9_RAT Rattus norvegicus ENSRNOG00000038946 N 0.000
PCBP2 Sus scrofa ENSSSCG00000000274 I 0.899
PCBP4 Taeniopygia guttata ENSTGUG00000006393 I 0.000
PCBP3-2 Taeniopygia guttata ENSTGUG00000008158 I 0.787
PCBP3 Tetraodon nigroviridis ENSTNIG00000010615 I 0.771
PCBP1 Tetraodon nigroviridis ENSTNIG00000012585 I 0.856
PCBP4 Tetraodon nigroviridis ENSTNIG00000017887 I 0.000
PCBP3 Takifugu rubripes ENSTRUG00000006280 I 0.771
PCBP4 Takifugu rubripes ENSTRUG00000007426 I 0.000
ENSTRUG00000009361 Takifugu rubripes ENSTRUG00000009361 I 0.862
ENSTRUG00000011419 Takifugu rubripes ENSTRUG00000011419 I 0.858
PCBP3 Takifugu rubripes ENSTRUG00000013604 I 0.792
ENSTRUG00000017789 Takifugu rubripes ENSTRUG00000017789 I 0.000
PCBP3 Tursiops truncatus ENSTTRG00000015075 I 0.782
PCBP2 Tursiops truncatus ENSTTRG00000017174 I 0.899
pcbp3 Xenopus tropicalis ENSXETG00000012658 I 0.883