AAN77161 (Xenopus laevis)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 AAN77161 T22146_0.6 Xenbase (2010-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
KHSRP
M342_0.6 		Homo sapiens Sequence logo not available CnsCyUCC RIP-chip
Cook et al.(2011)
906_17437629.3 		0.728
KHSRP
M341_0.6 		Homo sapiens Sequence logo not available nUGUrUrU RIP-chip
Cook et al.(2011)
906_17437629.2 		0.728
KHSRP
M340_0.6 		Homo sapiens Sequence logo not available UwUAUUUw RIP-chip
Cook et al.(2011)
906_17437629.1 		0.728
KHSRP
M339_0.6 		Homo sapiens Sequence logo not available UAUUUAUw RIP-chip
Cook et al.(2011)
906_17437629 		0.728
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
AAN77161 KH 90 152
AAN77161 KH 175 239
AAN77161 KH 266 327
AAN77161 KH 366 431

Links

Other KH family RBPs
Other Xenopus laevis RBPs

102 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AAH44277 Xenopus laevis AAH44277 I 0.930
AAH60400 Xenopus laevis AAH60400 N 0.756
AAH70981 Xenopus laevis AAH70981 I 0.973
AAI61696 Xenopus laevis AAI61696 I 0.716
AAI69815 Xenopus laevis AAI69815 I 0.973
AAI69923 Xenopus laevis AAI69923 I 0.708
AAN77160 Xenopus laevis AAN77160 I 0.708
Ame_R003042 Ailuropoda melanoleuca Ame_R003042 N 0.748
Ame_R010564 Ailuropoda melanoleuca Ame_R010564 I 0.895
Ame_R016412 Ailuropoda melanoleuca Ame_R016412 I 0.728
FUBP1 Anolis carolinensis ENSACAG00000006310 I 0.899
KHSRP Anolis carolinensis ENSACAG00000015398 I 0.732
Q08DJ3_BOVIN Bos taurus ENSBTAG00000008926 I 0.899
A6QP83_BOVIN Bos taurus ENSBTAG00000013072 N 0.744
LOC505564 Bos taurus ENSBTAG00000021018 I 0.728
KHSRP Canis familiaris ENSCAFG00000018667 I 0.728
FUBP3 Canis familiaris ENSCAFG00000019942 N 0.744
FUBP1 Canis familiaris ENSCAFG00000020361 I 0.899
FUBP1 Choloepus hoffmanni ENSCHOG00000008177 I 0.899
FUBP1 Callithrix jacchus ENSCJAG00000007062 I 0.899
KHSRP Callithrix jacchus ENSCJAG00000016627 I 0.728
LOC100399862 Callithrix jacchus ENSCJAG00000020542 N 0.752
FUBP1 Cavia porcellus ENSCPOG00000002757 I 0.899
KHSRP Cavia porcellus ENSCPOG00000005140 I 0.728
FUBP3 Cavia porcellus ENSCPOG00000010315 N 0.752
ENSDARG00000007049 Danio rerio ENSDARG00000007049 N 0.736
KHSRP Danio rerio ENSDARG00000026489 I 0.700
fubp1 Danio rerio ENSDARG00000029248 I 0.848
FUBP3 Dasypus novemcinctus ENSDNOG00000014533 N 0.729
Khsrp Dipodomys ordii ENSDORG00000002447 I 0.724
Fubp1 Dipodomys ordii ENSDORG00000016534 I 0.899
FUBP1 Equus caballus ENSECAG00000010867 I 0.899
LOC100069755 Equus caballus ENSECAG00000011500 N 0.713
LOC100065608 Equus caballus ENSECAG00000018305 I 0.728
KHSRP Felis catus ENSFCAG00000003731 I 0.728
FUBP3 Felis catus ENSFCAG00000005113 N 0.740
KHSRP Homo sapiens ENSG00000088247 D 0.728
FUBP3 Homo sapiens ENSG00000107164 N 0.748
FUBP1 Homo sapiens ENSG00000162613 I 0.903
KHSRP Gasterosteus aculeatus ENSGACG00000012422 I 0.700
ENSGACG00000016563 Gasterosteus aculeatus ENSGACG00000016563 I 0.842
FUBP3 Gasterosteus aculeatus ENSGACG00000016704 N 0.702
Q5ZM76_CHICK Gallus gallus ENSGALG00000003941 N 0.752
Q5ZHW0_CHICK Gallus gallus ENSGALG00000008939 I 0.888
KHSRP Gorilla gorilla ENSGGOG00000007028 I 0.728
FUBP3 Gorilla gorilla ENSGGOG00000011318 N 0.748
FUBP1 Gorilla gorilla ENSGGOG00000027554 I 0.903
KHSRP Loxodonta africana ENSLAFG00000002426 I 0.728
FUBP1 Loxodonta africana ENSLAFG00000003273 I 0.899
FUBP3 Loxodonta africana ENSLAFG00000011611 N 0.744
FUBP3 Meleagris gallopavo ENSMGAG00000005342 N 0.752
FUBP1 Meleagris gallopavo ENSMGAG00000009424 I 0.887
KHSRP Microcebus murinus ENSMICG00000007863 I 0.719
FUBP1 Microcebus murinus ENSMICG00000014463 N 0.755
FUBP3 Microcebus murinus ENSMICG00000015452 N 0.752
FUBP3 Myotis lucifugus ENSMLUG00000008743 N 0.709
FUBP1 Myotis lucifugus ENSMLUG00000014802 I 0.899
FUBP1 Macaca mulatta ENSMMUG00000002899 I 0.903
KHSRP Macaca mulatta ENSMMUG00000005597 I 0.728
FUBP3 Macaca mulatta ENSMMUG00000008249 N 0.748
FUBP3 Monodelphis domestica ENSMODG00000012105 N 0.740
Khsrp Mus musculus ENSMUSG00000007670 I 0.728
Fubp3 Mus musculus ENSMUSG00000026843 N 0.740
Fubp1 Mus musculus ENSMUSG00000028034 I 0.895
FUBP3 Ornithorhynchus anatinus ENSOANG00000001042 N 0.756
FUBP1 Ornithorhynchus anatinus ENSOANG00000009777 I 0.899
FUBP1 Oryctolagus cuniculus ENSOCUG00000002225 I 0.842
FUBP1 Otolemur garnettii ENSOGAG00000014233 I 0.899
FUBP1 Ochotona princeps ENSOPRG00000001175 N 0.806
FUBP3 Ochotona princeps ENSOPRG00000008648 N 0.744
KHSRP Ochotona princeps ENSOPRG00000010594 I 0.724
ENSORLG00000003540 Oryzias latipes ENSORLG00000003540 I 0.837
FUBP3 Oryzias latipes ENSORLG00000017565 N 0.721
FUBP3 Procavia capensis ENSPCAG00000001717 N 0.729
FUBP1 Procavia capensis ENSPCAG00000012617 I 0.899
ENSPPYG00000001219 Pongo pygmaeus ENSPPYG00000001219 I 0.903
ENSPPYG00000009454 Pongo pygmaeus ENSPPYG00000009454 I 0.728
ENSPPYG00000019693 Pongo pygmaeus ENSPPYG00000019693 N 0.748
FUBP1 Pan troglodytes ENSPTRG00000000888 I 0.903
KHSRP Pan troglodytes ENSPTRG00000010364 I 0.728
FUBP3 Pan troglodytes ENSPTRG00000021474 N 0.748
FUBP3 Pteropus vampyrus ENSPVAG00000001510 N 0.752
KHSRP Pteropus vampyrus ENSPVAG00000007251 I 0.728
FUBP1 Pteropus vampyrus ENSPVAG00000014637 N 0.739
Fubp3 Rattus norvegicus ENSRNOG00000009139 N 0.744
ENSSSCG00000003767 Sus scrofa ENSSSCG00000003767 I 0.899
ENSSSCG00000003771 Sus scrofa ENSSSCG00000003771 I 0.899
KHSRP Sus scrofa ENSSSCG00000013538 I 0.728
KHSRP Spermophilus tridecemlineatus ENSSTOG00000002371 I 0.728
FUBP1 Spermophilus tridecemlineatus ENSSTOG00000014312 I 0.891
FUBP3 Taeniopygia guttata ENSTGUG00000004662 N 0.752
FUBP1 Taeniopygia guttata ENSTGUG00000006841 I 0.875
FUBP3 Tetraodon nigroviridis ENSTNIG00000005858 N 0.728
ENSTRUG00000004615 Takifugu rubripes ENSTRUG00000004615 I 0.840
FUBP3 Takifugu rubripes ENSTRUG00000013259 N 0.721
FUBP3 Takifugu rubripes ENSTRUG00000018658 N 0.702
FUBP1 Tarsius syrichta ENSTSYG00000000148 I 0.891
FUBP1 Tursiops truncatus ENSTTRG00000000096 I 0.899
KHSRP Tursiops truncatus ENSTTRG00000010390 I 0.728
FUBP1 Vicugna pacos ENSVPAG00000004709 I 0.899
fubp3 Xenopus tropicalis ENSXETG00000001344 N 0.752
fubp1 Xenopus tropicalis ENSXETG00000013137 I 0.953