BRADI5G14980 (Brachypodium distachyon)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 BRADI5G14980 T33312_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
BRADI5G14980.1 RRM 39 109
BRADI5G14980.1 RRM 127 196
BRADI5G14980.1 RRM 218 287
BRADI5G14980.1 RRM 321 390

Links

Other RRM family RBPs
Other Brachypodium distachyon RBPs

42 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
29801.m003152 Ricinus communis 29801.m003152 N 0.744
30170.m013847 Ricinus communis 30170.m013847 N 0.737
BGIOSIBCE015822 Oryza indica BGIOSIBCE015822 N 0.886
BGIOSIBCE027387 Oryza indica BGIOSIBCE027387 N 0.727
BGIOSIBCE029001 Oryza indica BGIOSIBCE029001 N 0.722
BRADI3G20460 Brachypodium distachyon BRADI3G20460 N 0.706
cassava12359.valid.m1 Manihot esculenta cassava12359.valid.m1 N 0.737
cassava17495.valid.m1 Manihot esculenta cassava17495.valid.m1 N 0.730
cassava6947.valid.m1 Manihot esculenta cassava6947.valid.m1 N 0.744
Cucsa.219740 Cucumis sativus Cucsa.219740 N 0.712
Cucsa.244510 Cucumis sativus Cucsa.244510 N 0.733
Glyma02g11580.1 Glycine max Glyma02g11580.1 N 0.740
Glyma07g33860.1 Glycine max Glyma07g33860.1 N 0.740
Glyma14g09300.1 Glycine max Glyma14g09300.1 N 0.737
Glyma17g35890.1 Glycine max Glyma17g35890.1 N 0.730
GRMZM2G013619 Zea mays GRMZM2G013619 N 0.865
GRMZM2G352129 Zea mays GRMZM2G352129 N 0.883
GSVIVG00009455001 Vitis vinifera GSVIVG00009455001 N 0.747
GSVIVG00022079001 Vitis vinifera GSVIVG00022079001 N 0.740
LOC_Os04g42600 Oryza sativa LOC_Os04g42600 N 0.886
LOC_Os08g22354 Oryza sativa LOC_Os08g22354 N 0.727
LOC_Os09g02700 Oryza sativa LOC_Os09g02700 N 0.722
MDP0000156895 Malus x domestica MDP0000156895 N 0.737
MDP0000253709 Malus x domestica MDP0000253709 N 0.737
MDP0000283985 Malus x domestica MDP0000283985 N 0.705
MDP0000497543 Malus x domestica MDP0000497543 N 0.730
Medtr1g024150 Medicago truncatula Medtr1g024150 N 0.715
Medtr3g147440 Medicago truncatula Medtr3g147440 N 0.708
Medtr4g130250 Medicago truncatula Medtr4g130250 N 0.751
mgf004973m Mimulus guttatus mgf004973m N 0.722
mgf005294m Mimulus guttatus mgf005294m N 0.708
mgf009542m Mimulus guttatus mgf009542m N 0.733
PK02172.1 Cannabis sativa PK02172.1 N 0.744
A9PEX9_POPTR Populus trichocarpa POPTR_0001s31160 N 0.758
POPTR_0002s12570 Populus trichocarpa POPTR_0002s12570 N 0.733
B9HS30_POPTR Populus trichocarpa POPTR_0009s10220 N 0.740
B9GNU4_POPTR Populus trichocarpa POPTR_0014s02550 N 0.744
ppa002607m Prunus persica ppa002607m N 0.733
ppa002618m Prunus persica ppa002618m N 0.733
ppa002620m Prunus persica ppa002620m N 0.733
Sb02g017910 Sorghum bicolor Sb02g017910 N 0.701
SB06G021850 Sorghum bicolor Sb06g021850 N 0.879