SB06G021850 (Sorghum bicolor)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 Sb06g021850 T46019_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
Sb06g021850.1 RRM 48 118
Sb06g021850.1 RRM 136 205
Sb06g021850.1 RRM 227 296
Sb06g021850.1 RRM 330 399

Links

Other RRM family RBPs
Other Sorghum bicolor RBPs

42 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
GRMZM2G352129 Zea mays GRMZM2G352129 N 0.972
GRMZM2G013619 Zea mays GRMZM2G013619 N 0.968
BRADI5G14980 Brachypodium distachyon BRADI5G14980 N 0.879
BGIOSIBCE015822 Oryza indica BGIOSIBCE015822 N 0.861
LOC_Os04g42600 Oryza sativa LOC_Os04g42600 N 0.861
Medtr4g130250 Medicago truncatula Medtr4g130250 N 0.747
A9PEX9_POPTR Populus trichocarpa POPTR_0001s31160 N 0.747
Glyma07g33860.1 Glycine max Glyma07g33860.1 N 0.744
Glyma02g11580.1 Glycine max Glyma02g11580.1 N 0.744
PK02172.1 Cannabis sativa PK02172.1 N 0.744
B9HS30_POPTR Populus trichocarpa POPTR_0009s10220 N 0.740
30170.m013847 Ricinus communis 30170.m013847 N 0.740
Glyma14g09300.1 Glycine max Glyma14g09300.1 N 0.740
ppa002620m Prunus persica ppa002620m N 0.737
cassava6947.valid.m1 Manihot esculenta cassava6947.valid.m1 N 0.737
ppa002618m Prunus persica ppa002618m N 0.737
GSVIVG00009455001 Vitis vinifera GSVIVG00009455001 N 0.737
Glyma17g35890.1 Glycine max Glyma17g35890.1 N 0.733
Medtr1g024150 Medicago truncatula Medtr1g024150 N 0.733
B9GNU4_POPTR Populus trichocarpa POPTR_0014s02550 N 0.730
POPTR_0002s12570 Populus trichocarpa POPTR_0002s12570 N 0.730
29801.m003152 Ricinus communis 29801.m003152 N 0.730
Cucsa.244510 Cucumis sativus Cucsa.244510 N 0.730
MDP0000156895 Malus x domestica MDP0000156895 N 0.726
cassava12359.valid.m1 Manihot esculenta cassava12359.valid.m1 N 0.726
MDP0000253709 Malus x domestica MDP0000253709 N 0.726
mgf004973m Mimulus guttatus mgf004973m N 0.722
cassava17495.valid.m1 Manihot esculenta cassava17495.valid.m1 N 0.722
ppa002607m Prunus persica ppa002607m N 0.722
GSVIVG00022079001 Vitis vinifera GSVIVG00022079001 N 0.719
Cucsa.219740 Cucumis sativus Cucsa.219740 N 0.719
mgf005294m Mimulus guttatus mgf005294m N 0.719
MDP0000497543 Malus x domestica MDP0000497543 N 0.719
LOC_Os08g22354 Oryza sativa LOC_Os08g22354 N 0.716
BGIOSIBCE027387 Oryza indica BGIOSIBCE027387 N 0.716
MDP0000283985 Malus x domestica MDP0000283985 N 0.715
mgf009542m Mimulus guttatus mgf009542m N 0.715
Medtr3g147440 Medicago truncatula Medtr3g147440 N 0.712
LOC_Os09g02700 Oryza sativa LOC_Os09g02700 N 0.705
BGIOSIBCE029001 Oryza indica BGIOSIBCE029001 N 0.705
estExt_fgenesh1_pg.C_2570045 Physcomitrella patens estExt_fgenesh1_pg.C_2570045 N 0.701
B9H7X9_POPTR Populus trichocarpa POPTR_0005s22040 N 0.701