KLLA0B09878g (Kluyveromyces lactis)
CCCH ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH) IPR000571 KLLA0B09878g T06238_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
KLLA0B09878g CCCH ZF 87 112
KLLA0B09878g CCCH ZF 117 140

Links

Other CCCH ZF family RBPs
Other Kluyveromyces lactis RBPs

36 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
CHGG_00049 Chaetomium globosum CHGG_00049 N 0.765
estExt_Genewise1.C_60695 Trichoderma atroviride estExt_Genewise1.C_60695 N 0.765
estExt_Genewise1.C_81229 Thielavia terrestris estExt_Genewise1.C_81229 N 0.745
estExt_Genewise1Plus.C_130028 Neurospora discreta estExt_Genewise1Plus.C_130028 N 0.765
gw1.28.197.1 Nectria haematococca gw1.28.197.1 N 0.765
Scas_Contig567.6 Saccharomyces castellii Scas_Contig567.6 N 0.800
22086_YPL054W Saccharomyces mikatae 22086_YPL054W N 0.740
23616_YPL054W Saccharomyces paradoxus 23616_YPL054W N 0.725
25080_YPL054W Saccharomyces bayanus 25080_YPL054W N 0.760
A7TTU4_VANPO Vanderwaltozyma polyspora A7TTU4_VANPO N 0.760
ADR062W Ashbya gossypii ADR062W N 0.780
Cd36_85970 Candida dubliniensis Cd36_85970 N 0.740
e_gw1.10.437.1 Cryphonectria parasitica e_gw1.10.437.1 N 0.725
KLTH0E11836g Kluyveromyces thermotolerans KLTH0E11836g N 0.760
Pa_5_7490 Podospora anserina Pa_5_7490 N 0.765
SAKL0H10846g Lachancea kluyveri SAKL0H10846g N 0.820
XP_002493509.1 Pichia pastoris XP_002493509.1 N 0.700
estExt_Genewise1.C_110035 Neurospora tetrasperma estExt_Genewise1.C_110035 N 0.765
estExt_fgenesh5_pg.C_100355 Trichoderma reesei estExt_fgenesh5_pg.C_100355 N 0.765
CLUG_02022 Candida lusitaniae CLUG_02022 N 0.720
CPAG_02338 Candida parapsilosis CPAG_02338 N 0.740
CTRG_02259 Candida tropicalis CTRG_02259 N 0.700
DEHA0D17303g Debaryomyces hansenii DEHA0D17303g N 0.720
FOXG_04082 Fusarium oxysporum FOXG_04082 N 0.780
FVEG_07196 Fusarium verticillioides FVEG_07196 N 0.780
GLRG_01727 Colletotrichum graminicola GLRG_01727 N 0.745
MGG_03480 Magnaporthe oryzae MGG_03480 N 0.745
orf19.7385 Candida albicans orf19.7385 N 0.760
VDAG_09556 Verticillium dahliae VDAG_09556 N 0.760
VDBG_09822 Verticillium albo atrum VDBG_09822 N 0.760
NCU05007 Neurospora crassa NCU05007 N 0.765
LEE1 Saccharomyces cerevisiae YPL054W N 0.725
e_gw1.29.29.1 Trichoderma virens e_gw1.29.29.1 N 0.765
e_gwh1.2.1.2495.1 Pichia stipitis e_gwh1.2.1.2495.1 N 0.740
estExt_fgenesh1_kg.C_60003 Myceliophthora thermophila estExt_fgenesh1_kg.C_60003 N 0.765
YALI0B12540g Yarrowia lipolytica YALI0B12540g N 0.740