KLLA0B09878g (Kluyveromyces lactis)
CCCH ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH) IPR000571 KLLA0B09878g T06238_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
KLLA0B09878g CCCH ZF 87 112
KLLA0B09878g CCCH ZF 117 140

Links

Other CCCH ZF family RBPs
Other Kluyveromyces lactis RBPs

36 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
PK23881.1 Cannabis sativa PK23881.1 N 0.000
Glyma10g31370.1 Glycine max Glyma10g31370.1 N 0.000
Glyma18g47660.1 Glycine max Glyma18g47660.1 N 0.000
Glyma20g36140.1 Glycine max Glyma20g36140.1 N 0.000
gw1.102.25.1 Physcomitrella patens gw1.102.25.1 N 0.000
mgf007299m Mimulus guttatus mgf007299m N 0.000
GRMZM2G087032 Zea mays GRMZM2G087032 N 0.000
GRMZM2G100794 Zea mays GRMZM2G100794 N 0.000
GRMZM2G107491 Zea mays GRMZM2G107491 N 0.000
GRMZM2G146514 Zea mays GRMZM2G146514 N 0.000
chr1.CM1413.200.nd Lotus japonicus chr1.CM1413.200.nd N 0.000
MDP0000207283 Malus x domestica MDP0000207283 N 0.000
ppa005229m Prunus persica ppa005229m N 0.000
Glyma09g38650.1 Glycine max Glyma09g38650.1 N 0.000
cassava29576.valid.m1 Manihot esculenta cassava29576.valid.m1 N 0.000
BRADI2G58770 Brachypodium distachyon BRADI2G58770 N 0.000
BRADI4G08050 Brachypodium distachyon BRADI4G08050 N 0.000
BRADI4G19010 Brachypodium distachyon BRADI4G19010 N 0.000
LOC_Os01g68860 Oryza sativa LOC_Os01g68860 N 0.000
LOC_Os11g28270 Oryza sativa LOC_Os11g28270 N 0.000
LOC_Os12g21700 Oryza sativa LOC_Os12g21700 N 0.000
Sb03g043810 Sorghum bicolor Sb03g043810 N 0.000
SB05G013190 Sorghum bicolor Sb05g013190 N 0.000
30128.m009030 Ricinus communis 30128.m009030 N 0.000
cassava12889.valid.m1 Manihot esculenta cassava12889.valid.m1 N 0.000
cassava12890.valid.m1 Manihot esculenta cassava12890.valid.m1 N 0.000
cassava17662.valid.m1 Manihot esculenta cassava17662.valid.m1 N 0.000
ppa005813m Prunus persica ppa005813m N 0.000