KHSRP (Ochotona princeps)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 ENSOPRG00000010594 T19259_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
KHSRP
M342_0.6 		Homo sapiens Sequence logo not available CnsCyUCC RIP-chip
Cook et al.(2011)
906_17437629.3 		0.992
KHSRP
M341_0.6 		Homo sapiens Sequence logo not available nUGUrUrU RIP-chip
Cook et al.(2011)
906_17437629.2 		0.992
KHSRP
M340_0.6 		Homo sapiens Sequence logo not available UwUAUUUw RIP-chip
Cook et al.(2011)
906_17437629.1 		0.992
KHSRP
M339_0.6 		Homo sapiens Sequence logo not available UAUUUAUw RIP-chip
Cook et al.(2011)
906_17437629 		0.992
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSOPRP00000009698 KH 165 227
ENSOPRP00000009698 KH 254 318
ENSOPRP00000009698 KH 343 405
ENSOPRP00000009698 KH 444 509

Links

Other KH family RBPs
Other Ochotona princeps RBPs

79 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
KHSRP Homo sapiens ENSG00000088247 D 0.992
FUBP1 Pan troglodytes ENSPTRG00000000888 I 0.770
KHSRP Pan troglodytes ENSPTRG00000010364 I 0.992
KHSRP Pteropus vampyrus ENSPVAG00000007251 I 0.988
ENSSSCG00000003767 Sus scrofa ENSSSCG00000003767 I 0.767
ENSSSCG00000003771 Sus scrofa ENSSSCG00000003771 I 0.767
KHSRP Sus scrofa ENSSSCG00000013538 I 0.992
KHSRP Spermophilus tridecemlineatus ENSSTOG00000002371 I 0.992
FUBP1 Spermophilus tridecemlineatus ENSSTOG00000014312 I 0.759
ENSPPYG00000019172 Pongo pygmaeus ENSPPYG00000019172 I 0.852
ENSPPYG00000009454 Pongo pygmaeus ENSPPYG00000009454 I 0.992
FUBP1 Ornithorhynchus anatinus ENSOANG00000009777 I 0.767
FUBP1 Oryctolagus cuniculus ENSOCUG00000002225 I 0.707
FUBP1 Otolemur garnettii ENSOGAG00000014233 I 0.767
ENSORLG00000003540 Oryzias latipes ENSORLG00000003540 I 0.712
KHSRP Oryzias latipes ENSORLG00000011882 I 0.805
KHSRP Procavia capensis ENSPCAG00000000246 I 0.837
FUBP1 Procavia capensis ENSPCAG00000012617 I 0.767
ENSPPYG00000001219 Pongo pygmaeus ENSPPYG00000001219 I 0.770
AAN77161 Xenopus laevis AAN77161 I 0.724
FUBP1 Taeniopygia guttata ENSTGUG00000006841 I 0.745
Ame_R010564 Ailuropoda melanoleuca Ame_R010564 I 0.764
Ame_R016412 Ailuropoda melanoleuca Ame_R016412 I 0.992
AAH44277 Xenopus laevis AAH44277 I 0.747
AAH70981 Xenopus laevis AAH70981 I 0.743
AAI61696 Xenopus laevis AAI61696 I 0.914
AAI69815 Xenopus laevis AAI69815 I 0.743
AAI69923 Xenopus laevis AAI69923 I 0.918
AAN77160 Xenopus laevis AAN77160 I 0.918
khsrp Xenopus tropicalis ENSXETG00000021862 I 0.833
fubp1 Xenopus tropicalis ENSXETG00000013137 I 0.751
KHSRP Tetraodon nigroviridis ENSTNIG00000014067 I 0.798
ENSTRUG00000004615 Takifugu rubripes ENSTRUG00000004615 I 0.708
KHSRP Takifugu rubripes ENSTRUG00000010395 I 0.805
FUBP1 Tarsius syrichta ENSTSYG00000000148 I 0.759
FUBP1 Tursiops truncatus ENSTTRG00000000096 I 0.767
KHSRP Tursiops truncatus ENSTTRG00000010390 I 0.992
FUBP1 Vicugna pacos ENSVPAG00000004709 I 0.767
KHSRP Vicugna pacos ENSVPAG00000010837 I 0.759
KHSRP Ornithorhynchus anatinus ENSOANG00000000261 I 0.884
Fubp1 Mus musculus ENSMUSG00000028034 I 0.767
LOC100065608 Equus caballus ENSECAG00000018305 I 0.992
FUBP1 Equus caballus ENSECAG00000010867 I 0.767
Fubp1 Dipodomys ordii ENSDORG00000016534 I 0.767
Khsrp Dipodomys ordii ENSDORG00000002447 I 0.988
KHSRP Dasypus novemcinctus ENSDNOG00000009590 I 0.897
fubp1 Danio rerio ENSDARG00000029248 I 0.716
KHSRP Danio rerio ENSDARG00000026489 I 0.911
KHSRP Cavia porcellus ENSCPOG00000005140 I 0.992
FUBP1 Cavia porcellus ENSCPOG00000002757 I 0.767
KHSRP Callithrix jacchus ENSCJAG00000016627 I 0.992
FUBP1 Callithrix jacchus ENSCJAG00000007062 I 0.767
FUBP1 Choloepus hoffmanni ENSCHOG00000008177 I 0.763
FUBP1 Canis familiaris ENSCAFG00000020361 I 0.767
KHSRP Canis familiaris ENSCAFG00000018667 I 0.992
LOC505564 Bos taurus ENSBTAG00000021018 I 0.992
Q08DJ3_BOVIN Bos taurus ENSBTAG00000008926 I 0.767
KHSRP Anolis carolinensis ENSACAG00000015398 I 0.988
KHSRP Echinops telfairi ENSETEG00000004793 I 0.887
KHSRP Felis catus ENSFCAG00000003731 I 0.992
FUBP1 Homo sapiens ENSG00000162613 I 0.770
Khsrp Mus musculus ENSMUSG00000007670 I 0.988
KHSRP Monodelphis domestica ENSMODG00000001952 I 0.926
KHSRP Macaca mulatta ENSMMUG00000005597 I 0.992
FUBP1 Macaca mulatta ENSMMUG00000002899 I 0.770
KHSRP Myotis lucifugus ENSMLUG00000015543 I 0.840
FUBP1 Myotis lucifugus ENSMLUG00000014802 I 0.767
KHSRP Microcebus murinus ENSMICG00000007863 I 0.977
FUBP1 Meleagris gallopavo ENSMGAG00000009424 I 0.755
KHSRP Macropus eugenii ENSMEUG00000016601 I 0.946
FUBP1 Loxodonta africana ENSLAFG00000003273 I 0.767
KHSRP Loxodonta africana ENSLAFG00000002426 I 0.988
FUBP1 Gorilla gorilla ENSGGOG00000027554 I 0.770
KHSRP Gorilla gorilla ENSGGOG00000007028 I 0.992
Q5ZHW0_CHICK Gallus gallus ENSGALG00000008939 I 0.757
KHSRP Gasterosteus aculeatus ENSGACG00000018990 I 0.856
ENSGACG00000016563 Gasterosteus aculeatus ENSGACG00000016563 I 0.710
KHSRP Gasterosteus aculeatus ENSGACG00000012422 I 0.872
FUBP1 Anolis carolinensis ENSACAG00000006310 I 0.759