CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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TESG_01120
(
Trichophyton tonsurans
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
TESG_01120
T31143_0.6
Broad (2011-Oct-27)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
TESG_01120T0
RRM
53
123
LYVGNLSFYTTEEQIHELFAKCGEIKRLVMGLDRFQKTPCGFCFVEYYMHQDALDCMKYIGGTKLDERIIR
Links
Other
RRM
family RBPs
Other
Trichophyton tonsurans
RBPs
114 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
NCBP2
Macaca mulatta
ENSMMUG00000007825
N
0.704
NCBP2_IXOSC
Ixodes scapularis
ISCW017479
N
0.718
NCU00210
Neurospora crassa
NCU00210
N
0.930
PHUM535920
Pediculus humanus
PHUM535920
N
0.761
cbc2
Schizosaccharomyces pombe
SPBC13A2.01c
N
0.761
Aqu1.228507
Amphimedon queenslandica
Aqu1.228507
N
0.704
e_gw1.10.746.1
Trichoderma virens
e_gw1.10.746.1
N
0.915
e_gw1.121.83.1
Postia placenta
e_gw1.121.83.1
N
0.000
e_gw1.17.191.1
Trichoderma reesei
e_gw1.17.191.1
N
0.901
e_gw1.18.125.1
Batrachochytrium dendrobatidis
e_gw1.18.125.1
N
0.775
e_gw1.3.1174.1
Thielavia terrestris
e_gw1.3.1174.1
N
0.930
e_gw1.40.70.1
Melampsora laricis populina
e_gw1.40.70.1
N
0.732
e_gw1.80.70.1
Selaginella moellendorfii
e_gw1.80.70.1
N
0.000
NCBP2
Tursiops truncatus
ENSTTRG00000013908
N
0.704
B5G279_TAEGU
Taeniopygia guttata
ENSTGUG00000007323
N
0.732
XM_001373408.1
Monodelphis domestica
ENSMODG00000015908
N
0.718
XM_001371285.1
Monodelphis domestica
ENSMODG00000023276
N
0.704
Ncbp2
Mus musculus
ENSMUSG00000022774
N
0.704
NCBP2
Oryctolagus cuniculus
ENSOCUG00000006738
N
0.704
NCBP2
Otolemur garnettii
ENSOGAG00000005009
N
0.704
ENSPPYG00000014449
Pongo pygmaeus
ENSPPYG00000014449
N
0.704
NCBP2
Pan troglodytes
ENSPTRG00000015789
N
0.704
Pigz
Rattus norvegicus
ENSRNOG00000001746
N
0.704
ENSSSCG00000011835
Sus scrofa
ENSSSCG00000011835
N
0.704
ENSSSCG00000011840
Sus scrofa
ENSSSCG00000011840
N
0.704
ENSSTOG00000001584
Spermophilus tridecemlineatus
ENSSTOG00000001584
N
0.704
NCBP2
Tupaia belangeri
ENSTBEG00000015222
N
0.704
estExt_fgenesh1_kg.C_sca_10_chr8_2_00014
Nectria haematococca
estExt_fgenesh1_kg.C_sca_10_chr8_2_00014
N
0.915
estExt_fgenesh1_pm.C_20437
Schizophyllum commune
estExt_fgenesh1_pm.C_20437
N
0.727
PredSwiss_ASS2010_2397.2
Pneumocystis carinii
PredSwiss_ASS2010_2397.2
N
0.747
PredSwiss_CON682.3
Pneumocystis carinii
PredSwiss_CON682.3
N
0.747
BGIBMGA007585
Bombyx mori
BGIBMGA007585
N
0.704
Ame_R004608
Ailuropoda melanoleuca
Ame_R004608
N
0.704
estExt_fgenesh2_kg.C_120041
Serpula lacrymans
estExt_fgenesh2_kg.C_120041
N
0.701
fgenesh1_pg.C_scaffold_1000747
Cryphonectria parasitica
fgenesh1_pg.C_scaffold_1000747
N
0.873
fgenesh1_pm.00772_#_82
Aspergillus carbonarius
fgenesh1_pm.00772_#_82
N
0.944
GSTUMT00010626001
Tuber melanosporum
GSTUMT00010626001
N
0.915
gw1.1.2136.1
Pleurotus ostreatus
gw1.1.2136.1
N
0.000
Pc13g04070
Penicillium chrysogenum
Pc13g04070
N
0.958
PMAA_070830
Penicillium marneffei
PMAA_070830
N
0.972
XP_001187788.1
Strongylocentrotus purpuratus
XP_001187788.1
N
0.000
EFA74823.1
Polysphondylium pallidum
EFA74823.1
N
0.761
EAT82863.2
Phaeosphaeria nodorum
EAT82863.2
N
0.958
estExt_Genewise1.C_10147
Cochliobolus heterostrophus C5
estExt_Genewise1.C_10147
N
0.958
estExt_Genewise1Plus.C_150343
Trichoderma atroviride
estExt_Genewise1Plus.C_150343
N
0.944
estExt_Genewise1Plus.C_40730
Myceliophthora thermophila
estExt_Genewise1Plus.C_40730
N
0.930
estExt_Genewise1Plus.C_50921
Neurospora discreta
estExt_Genewise1Plus.C_50921
N
0.930
estExt_Genewise1_worm.C_60324
Laccaria bicolor
estExt_Genewise1_worm.C_60324
N
0.701
fgeneshMC_pm.5_#_40
Mucor circinelloides
fgeneshMC_pm.5_#_40
N
0.831
GID1.0044779
Dictyostelium purpureum
GID1.0044779
N
0.775
gw1.1.1171.1
Sporobolomyces roseus
gw1.1.1171.1
N
0.718
gw1.29.143.1
Phycomyces blakesleeanus
gw1.29.143.1
N
0.831
gw.81.90.1
Branchiostoma floridae
gw.81.90.1
N
0.746
gw.93.114.1
Branchiostoma floridae
gw.93.114.1
N
0.746
gwh2.1.1054.1
Phanerochaete chrysosporium
gwh2.1.1054.1
N
0.000
XP_802051.1
Strongylocentrotus purpuratus
XP_802051.1
N
0.000
AMAG_02834
Allomyces macrogynus
AMAG_02834
N
0.761
MGG_06296
Magnaporthe oryzae
MGG_06296
N
0.901
MGYG_02166
Microsporum gypseum
MGYG_02166
N
0.986
PABG_07236
Paracoccidioides brasiliensis
PABG_07236
N
0.972
PGTG_01720
Puccinia graminis
PGTG_01720
N
0.732
PTRG_00402
Pyrenophora tritici repentis
PTRG_00402
N
0.958
SJAG_01064
Schizosaccharomyces japonicus
SJAG_01064
N
0.775
SNOG_09598
Stagonospora nodorum
SNOG_09598
N
0.958
SOCG_01831
Schizosaccharomyces octosporus
SOCG_01831
N
0.775
SPOG_01217
Schizosaccharomyces cryophilus
SPOG_01217
N
0.789
SPPG_00516
Spizellomyces punctatus
SPPG_00516
N
0.845
SS1G_13629
Sclerotinia sclerotiorum
SS1G_13629
N
0.958
TEQG_01953
Trichophyton equinum
TEQG_01953
N
0.986
MCYG_04468
Microsporum canis
MCYG_04468
N
0.986
LOAG_03270
Loa loa
LOAG_03270
N
0.704
BC1G_04395
Botrytis cinerea
BC1G_04395
N
0.958
BDBG_08091
Blastomyces dermatitidis
BDBG_08091
N
0.972
Bm1_02935
Brugia malayi
Bm1_02935
N
0.000
CAOG_06930
Capsaspora owczarzaki
CAOG_06930
N
0.000
CHGG_03355
Chaetomium globosum
CHGG_03355
N
0.833
CIMG_00837
Coccidioides immitis
CIMG_00837
N
0.972
CPSG_08054
Coccidioides posadasii
CPSG_08054
N
0.972
FGSG_05488
Fusarium graminearum
FGSG_05488
N
0.915
FOXG_09405
Fusarium oxysporum
FOXG_09405
N
0.833
FVEG_07036
Fusarium verticillioides
FVEG_07036
N
0.915
GLRG_00177
Colletotrichum graminicola
GLRG_00177
N
0.915
HCAG_07341
Histoplasma capsulatum
HCAG_07341
N
0.972
TERG_03424
Trichophyton rubrum
TERG_03424
N
0.986
ncbp2
Dictyostelium discoideum
DDB_G0287197
N
0.775
ENSACAG00000015128
Anolis carolinensis
ENSACAG00000015128
N
0.732
NCBP2_BOVIN
Bos taurus
ENSBTAG00000008873
N
0.704
NCBP2
Canis familiaris
ENSCAFG00000013100
N
0.704
LOC100404338
Callithrix jacchus
ENSCJAG00000013735
N
0.704
NCBP2
Equus caballus
ENSECAG00000016153
N
0.704
NCBP2
Homo sapiens
ENSG00000114503
N
0.704
NCBP2_CHICK
Gallus gallus
ENSGALG00000005753
N
0.718
NCBP2
Loxodonta africana
ENSLAFG00000006372
N
0.704
ENSMEUG00000008126
Macropus eugenii
ENSMEUG00000008126
N
0.704
ENSMGAG00000002257
Meleagris gallopavo
ENSMGAG00000002257
N
0.718
NCBP2
Microcebus murinus
ENSMICG00000003162
N
0.704
NFIA_084190
Neosartorya fischeri
CADNFIAG00008064
N
0.930
ATEG_09693
Aspergillus terreus
CADATEAG00004149
N
0.000
VDAG_05874
Verticillium dahliae
VDAG_05874
N
0.915
VDBG_06810
Verticillium albo atrum
VDBG_06810
N
0.915
WUBG_16568
Wuchereria bancrofti
WUBG_16568
N
0.704
amel4_ncbi_hmm3188
Apis mellifera
amel4_ncbi_hmm3188
N
0.746
DGIL_AUG5s12516g4t1
Acyrtosiphon pisum
DGIL_AUG5s12516g4t1
N
0.000
nasonia_NCBI_hmm134534
Nasonia vitripennis
nasonia_NCBI_hmm134534
N
0.718
nasonia_NCBI_hmm1532803
Nasonia vitripennis
nasonia_NCBI_hmm1532803
N
0.746
NCBP2_AEDAE
Aedes aegypti
AAEL006135
N
0.732
ACLA_080400
Aspergillus clavatus
CADACLAG00007885
N
0.845
AFLA_046450
Aspergillus flavus
CADAFLAG00005972
N
0.915
AFUA_2G08570
Aspergillus fumigatus
CADAFUAG00004718
N
0.930
An12g03930
Aspergillus niger
CADANGAG00009835
N
0.944
NCBP2
Myotis lucifugus
ENSMLUG00000017500
N
0.704