PPIE (Gasterosteus aculeatus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSGACG00000007165 T37448_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSGACP00000009493 RRM 8 78

Links

Other RRM family RBPs
Other Gasterosteus aculeatus RBPs

87 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
PPIE Pan troglodytes ENSPTRG00000000577 N 0.944
GF11346 Drosophila ananassae FBgn0088386 N 0.746
GG21795 Drosophila erecta FBgn0113973 N 0.732
GH20760 Drosophila grimshawi FBgn0128223 N 0.746
GI20843 Drosophila mojavensis FBgn0143577 N 0.746
GL11464 Drosophila persimilis FBgn0149073 N 0.732
GM21798 Drosophila sechellia FBgn0176676 N 0.732
GD11288 Drosophila simulans FBgn0183037 N 0.746
GJ20579 Drosophila virilis FBgn0207718 N 0.746
GA18502-RA Drosophila pseudoobscura FBgn0078504 N 0.732
cyp33 Drosophila melanogaster FBgn0028382 N 0.746
PPIE Tursiops truncatus ENSTTRG00000014385 N 0.944
PPIE Pteropus vampyrus ENSPVAG00000002120 N 0.944
Ppie Rattus norvegicus ENSRNOG00000014762 N 0.944
PPIE Sorex araneus ENSSARG00000005703 N 0.944
PPIE Sus scrofa ENSSSCG00000003664 N 0.944
PPIE Spermophilus tridecemlineatus ENSSTOG00000010445 N 0.789
PPIE Taeniopygia guttata ENSTGUG00000001276 N 0.958
PPIE Tetraodon nigroviridis ENSTNIG00000016901 N 0.930
Q8QGJ6_FUGRU Takifugu rubripes ENSTRUG00000006308 N 0.930
GK21899 Drosophila willistoni FBgn0223884 N 0.746
GE11871 Drosophila yakuba FBgn0229657 N 0.746
ISCW002449 Ixodes scapularis ISCW002449 N 0.859
PASA_GEN_6900014 Daphnia pulex PASA_GEN_6900014 N 0.708
BGIBMGA003414 Bombyx mori BGIBMGA003414 N 0.873
Ame_R020475 Ailuropoda melanoleuca Ame_R020475 N 0.901
Smp_094810 Schistosoma mansoni Smp_094810 N 0.718
XP_001175534.1 Strongylocentrotus purpuratus XP_001175534.1 N 0.845
XP_002154334.1 Hydra magnipapillata XP_002154334.1 N 0.845
XP_002168022.1 Hydra magnipapillata XP_002168022.1 N 0.845
XP_799104.2 Strongylocentrotus purpuratus XP_799104.2 N 0.845
estExt_gwp.C_5080019 Branchiostoma floridae estExt_gwp.C_5080019 N 0.831
estExt_gwp.C_2960041 Branchiostoma floridae estExt_gwp.C_2960041 N 0.831
estExt_gwp.C_1130042 Nematostella vectensis estExt_gwp.C_1130042 N 0.859
PHUM293600 Pediculus humanus PHUM293600 N 0.873
Ppa-cyn-13 Pristionchus pacificus PPA01466 N 0.803
cyn-13 Caenorhabditis elegans Y116A8C.34 N 0.732
SNAPOd2T00024835001 Oikopleura dioica SNAPOd2T00024835001 N 0.704
107863 Helobdella robusta 107863 N 0.803
Aqu1.226474 Amphimedon queenslandica Aqu1.226474 N 0.775
estExt_fgenesh2_kg.C_sca_1160007 Lottia gigantea estExt_fgenesh2_kg.C_sca_1160007 N 0.859
estExt_fgeneshTA2_pm.C_70022 Trichoplax adhaerens estExt_fgeneshTA2_pm.C_70022 N 0.746
AAI23372 Xenopus laevis AAI23372 N 0.915
ENSPPYG00000001501 Pongo pygmaeus ENSPPYG00000001501 N 0.915
Bm1_52100 Brugia malayi Bm1_52100 N 0.761
CBG00420 Caenorhabditis briggsae CBG00420 N 0.732
CBN02296 Caenorhabditis brenneri CBN02296 N 0.761
CJA08769 Caenorhabditis japonica CJA08769 N 0.732
CPIJ008841 Culex quinquefasciatus CPIJ008841 N 0.718
CRE28739 Caenorhabditis remanei CRE28739 N 0.746
PPIE Anolis carolinensis ENSACAG00000002688 N 0.958
PPIE Canis familiaris ENSCAFG00000003031 N 0.944
ENSCING00000003116 Ciona intestinalis ENSCING00000003116 N 0.817
AGAP009810 Anopheles gambiae AGAP009810 N 0.761
AAEL013948 Aedes aegypti AAEL013948 N 0.732
nasonia_NCBI_hmm78483 Nasonia vitripennis nasonia_NCBI_hmm78483 N 0.803
CAOG_01587 Capsaspora owczarzaki CAOG_01587 N 0.761
CpipJ_CPIJ008841 Culex pipiens CpipJ_CPIJ008841 N 0.718
LOAG_00807 Loa loa LOAG_00807 N 0.761
WUBG_08965 Wuchereria bancrofti WUBG_08965 N 0.761
amel4_ncbi_hmm1701 Apis mellifera amel4_ncbi_hmm1701 N 0.873
amel4_ncbi_hmm1701 Tribolium castaneum amel4_ncbi_hmm1701 N 0.873
amel4_ncbi_hmm44329 Apis mellifera amel4_ncbi_hmm44329 N 0.845
DGIL_AUG5s585g5t1 Acyrtosiphon pisum DGIL_AUG5s585g5t1 N 0.761
LOC100400545 Callithrix jacchus ENSCJAG00000002589 N 0.944
PPIE Cavia porcellus ENSCPOG00000007365 N 0.931
ENSCSAVG00000006547 Ciona savignyi ENSCSAVG00000006547 N 0.775
PPIE Microcebus murinus ENSMICG00000016676 N 0.944
ENSMLUG00000006201 Myotis lucifugus ENSMLUG00000006201 N 0.704
PPIE Myotis lucifugus ENSMLUG00000016233 N 0.944
PPIE Macaca mulatta ENSMMUG00000018869 N 0.944
PPIE Monodelphis domestica ENSMODG00000017659 N 0.958
Ppie Mus musculus ENSMUSG00000028651 N 0.944
PPIE Ornithorhynchus anatinus ENSOANG00000010003 N 0.958
PPIE Oryctolagus cuniculus ENSOCUG00000007665 N 0.944
PPIE Macropus eugenii ENSMEUG00000005090 N 0.792
PPIE Loxodonta africana ENSLAFG00000028312 N 0.944
PPIE Gorilla gorilla ENSGGOG00000015783 N 0.944
ppie Danio rerio ENSDARG00000059270 N 0.958
PPIE Dasypus novemcinctus ENSDNOG00000002404 N 0.944
LOC100054084 Equus caballus ENSECAG00000008955 N 0.944
LOC100054282 Equus caballus ENSECAG00000024285 N 0.944
PPIE Erinaceus europaeus ENSEEUG00000010232 N 0.789
PPIE Felis catus ENSFCAG00000006027 N 0.901
PPIE Homo sapiens ENSG00000084072 N 0.944
PPIE Gallus gallus ENSGALG00000013383 N 0.958
PPIE Oryzias latipes ENSORLG00000017469 N 0.958