mgf007385m (Mimulus guttatus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 mgf007385m T53648_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
mgf007385m RRM 240 265
mgf007385m RRM 271 315
mgf007385m RRM 360 430
mgf007385m RRM 495 556

Links

Other RRM family RBPs
Other Mimulus guttatus RBPs

48 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
ppa006486m Prunus persica ppa006486m N 0.801
mgf009246m Mimulus guttatus mgf009246m N 0.751
mgf004253m Mimulus guttatus mgf004253m N 1.000
gw1.88.127.1 Physcomitrella patens gw1.88.127.1 N 0.780
gw1.42.85.1 Selaginella moellendorfii gw1.42.85.1 N 0.733
Glyma06g48230.1 Glycine max Glyma06g48230.1 N 0.841
Glyma04g43500.1 Glycine max Glyma04g43500.1 N 0.840
estExt_gwp_gw1.C_2700027 Physcomitrella patens estExt_gwp_gw1.C_2700027 N 0.768
estExt_Genewise1.C_1000126 Selaginella moellendorfii estExt_Genewise1.C_1000126 N 0.776
e_gw1.98.112.1 Physcomitrella patens e_gw1.98.112.1 N 0.743
e_gw1.79.119.1 Physcomitrella patens e_gw1.79.119.1 N 0.772
mgf010551m Mimulus guttatus mgf010551m N 0.927
GRMZM2G022763 Zea mays GRMZM2G022763 N 0.828
MDP0000306572 Malus x domestica MDP0000306572 N 0.907
MDP0000288579 Malus x domestica MDP0000288579 N 0.795
MDP0000194332 Malus x domestica MDP0000194332 N 0.898
chr6.LjT04E21.260.nc Lotus japonicus chr6.LjT04E21.260.nc N 0.756
chr3.CM0129.150.nc Lotus japonicus chr3.CM0129.150.nc N 0.854
Medtr4g032620 Medicago truncatula Medtr4g032620 N 0.868
Medtr4g032540 Medicago truncatula Medtr4g032540 N 0.868
Medtr3g013160 Medicago truncatula Medtr3g013160 N 0.851
GRMZM2G093256 Zea mays GRMZM2G093256 N 0.838
GRMZM2G057450 Zea mays GRMZM2G057450 N 0.839
e_gw1.58.41.1 Physcomitrella patens e_gw1.58.41.1 N 0.772
Cucsa.365600 Cucumis sativus Cucsa.365600 N 0.893
LOC_Os11g41820 Oryza sativa LOC_Os11g41820 N 0.789
GSVIVG00018993001 Vitis vinifera GSVIVG00018993001 N 0.877
XM_002866951.1 Arabidopsis lyrata fgenesh2_kg.7__398__AT4G36690.1 N 0.850
XM_002888074.1 Arabidopsis lyrata fgenesh2_kg.2__371__AT1G60900.1 N 0.863
BRADI4G38060 Brachypodium distachyon BRADI4G38060 N 0.760
BRADI4G12260 Brachypodium distachyon BRADI4G12260 N 0.839
BRADI4G09940 Brachypodium distachyon BRADI4G09940 N 0.834
BGIOSIBCE035101 Oryza indica BGIOSIBCE035101 N 0.716
BGIOSIBCE008762 Oryza indica BGIOSIBCE008762 N 0.828
ATU2AF65A Arabidopsis thaliana AT4G36690-TAIR-G N 0.845
LOC_Os11g45590 Oryza sativa LOC_Os11g45590 N 0.833
B9H2X2_POPTR Populus trichocarpa POPTR_0004s04100 N 0.794
cassava40785.m1 Manihot esculenta cassava40785.m1 N 0.888
cassava40784.m1 Manihot esculenta cassava40784.m1 N 0.888
cassava40783.m1 Manihot esculenta cassava40783.m1 N 0.888
cassava37462.valid.m1 Manihot esculenta cassava37462.valid.m1 N 0.888
cassava37461.valid.m1 Manihot esculenta cassava37461.valid.m1 N 0.888
cassava35938.valid.m1 Manihot esculenta cassava35938.valid.m1 N 0.893
cassava35937.valid.m1 Manihot esculenta cassava35937.valid.m1 N 0.893
SB05G026740 Sorghum bicolor Sb05g026740 N 0.844
B9HEU4_POPTR Populus trichocarpa POPTR_0007s12550 N 0.888
B9MXR1_POPTR Populus trichocarpa POPTR_0005s12700 N 0.888
AT1G60900 Arabidopsis thaliana AT1G60900-TAIR-G N 0.859