Aqu1.226881 (Amphimedon queenslandica)
CCHC ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC) IPR001878 Aqu1.226881 T13312_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
Aqu1.226881 CCHC ZF 145 161

Links

Other CCHC ZF family RBPs
Other Amphimedon queenslandica RBPs

10 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AAB97457 Xenopus laevis AAB97457 I 0.000
AAC18597 Xenopus laevis AAC18597 I 0.000
AAC18598 Xenopus laevis AAC18598 I 0.000
AAC41285 Xenopus laevis AAC41285 I 0.000
AAH57700 Xenopus laevis AAH57700 I 0.000
AAI70196 Xenopus laevis AAI70196 I 0.000
AAI70224 Xenopus laevis AAI70224 I 0.000
AAI70477 Xenopus laevis AAI70477 I 0.000
AAI70479 Xenopus laevis AAI70479 I 0.000
Ame_R004727 Ailuropoda melanoleuca Ame_R004727 I 0.000
D3ZB84_RAT Rattus norvegicus ENSRNOG00000009052 I 0.000
ENSGGOG00000024907 Gorilla gorilla ENSGGOG00000024907 I 0.000
ENSPPYG00000008913 Pongo pygmaeus ENSPPYG00000008913 I 0.000
ENSPPYG00000017730 Pongo pygmaeus ENSPPYG00000017730 I 0.000
IF2B1_CHICK Gallus gallus ENSGALG00000001293 I 0.000
IF2B3_CHICK Gallus gallus ENSGALG00000010961 I 0.000
IGF2BP1 Oryctolagus cuniculus ENSOCUG00000004411 I 0.000
IGF2BP1 Pteropus vampyrus ENSPVAG00000001718 I 0.000
Igf2bp1 Mus musculus ENSMUSG00000013415 I 0.000
IGF2BP1 Monodelphis domestica ENSMODG00000012268 I 0.000
IGF2BP1 Otolemur garnettii ENSOGAG00000001270 I 0.000
IGF2BP1 Pan troglodytes ENSPTRG00000009368 I 0.000
Igf2bp1 Rattus norvegicus ENSRNOG00000006122 I 0.000
IGF2BP1 Tetraodon nigroviridis ENSTNIG00000013986 I 0.000
IGF2BP1 Tarsius syrichta ENSTSYG00000003912 I 0.000
IGF2BP1 Tursiops truncatus ENSTTRG00000007197 I 0.000
IGF2BP1 Macaca mulatta ENSMMUG00000011533 I 0.000
IGF2BP1 Bos taurus ENSBTAG00000011736 I 0.000
igf2bp1 Danio rerio ENSDARG00000061478 I 0.000
IGF2BP1 Homo sapiens ENSG00000159217 D 0.000
IGF2BP1 Gorilla gorilla ENSGGOG00000008872 I 0.000
IGF2BP1 Loxodonta africana ENSLAFG00000002048 I 0.000
IGF2BP1 Cavia porcellus ENSCPOG00000020174 I 0.000
IGF2BP1 Gasterosteus aculeatus ENSGACG00000005318 I 0.000
Igf2bp1 Dipodomys ordii ENSDORG00000014371 I 0.000
IGF2BP1 Microcebus murinus ENSMICG00000013324 I 0.000
IGF2BP1 Equus caballus ENSECAG00000009723 I 0.000
IGF2BP1 Canis familiaris ENSCAFG00000016907 I 0.000
Igf2bp2 Rattus norvegicus ENSRNOG00000025946 I 0.000
IGF2BP2 Oryctolagus cuniculus ENSOCUG00000005057 I 0.000
IGF2BP2 Pteropus vampyrus ENSPVAG00000011494 I 0.000
IGF2BP2 Tetraodon nigroviridis ENSTNIG00000016472 I 0.000
IGF2BP2 Homo sapiens ENSG00000073792 D 0.000
IGF2BP2 Gasterosteus aculeatus ENSGACG00000005991 I 0.000
IGF2BP2 Macaca mulatta ENSMMUG00000023416 I 0.000
Igf2bp2 Mus musculus ENSMUSG00000033581 I 0.000
IGF2BP2 Takifugu rubripes ENSTRUG00000009908 I 0.000
IGF2BP2 Oryzias latipes ENSORLG00000016532 I 0.000
igf2bp2a Danio rerio ENSDARG00000003421 I 0.000
igf2bp3 Xenopus tropicalis ENSXETG00000007396 I 0.000
IGF2BP3 Tetraodon nigroviridis ENSTNIG00000017755 I 0.000
Igf2bp3 Dipodomys ordii ENSDORG00000014185 I 0.000
IGF2BP3 Callithrix jacchus ENSCJAG00000001499 I 0.000
IGF2BP3 Choloepus hoffmanni ENSCHOG00000002341 I 0.000
igf2bp3 Danio rerio ENSDARG00000010266 I 0.000
IGF2BP3 Tursiops truncatus ENSTTRG00000008921 I 0.000
IGF2BP3 Ornithorhynchus anatinus ENSOANG00000014203 I 0.000
IGF2BP3 Microcebus murinus ENSMICG00000013683 I 0.000
Igf2bp3 Mus musculus ENSMUSG00000029814 I 0.000
IGF2BP3 Macaca mulatta ENSMMUG00000004839 I 0.000
IGF2BP3 Oryzias latipes ENSORLG00000004712 I 0.000
IGF2BP3 Anolis carolinensis ENSACAG00000013538 I 0.000
IGF2BP3 Homo sapiens ENSG00000136231 D 0.000
IGF2BP3 Takifugu rubripes ENSTRUG00000006094 I 0.000
IGF2BP3 Taeniopygia guttata ENSTGUG00000002773 I 0.000
IGF2BP3 Monodelphis domestica ENSMODG00000001014 I 0.000
LOC100395821 Callithrix jacchus ENSCJAG00000007258 I 0.000
LOC424865 Gallus gallus ENSGALG00000006523 I 0.000
O57526 Xenopus laevis O57526 I 0.000
O73932 Xenopus laevis O73932 I 0.000
XR_022832.1 Pan troglodytes ENSPTRG00000018986 I 0.000
XR_025001.1 Pan troglodytes ENSPTRG00000015705 I 0.000