A6MK33_CALJA (Callithrix jacchus)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 ENSCJAG00000005783 T18531_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
Pcbp3
M188_0.6 		Mus musculus UUUYCC RNAcompete
Ray et al.(2013)
RNCMPT00215 		0.742
pcbp2
M211_0.6 		Danio rerio WWUCCC RNAcompete
Ray et al.(2013)
RNCMPT00246 		0.716
PCBP2
M043_0.6 		Homo sapiens CCYYCCH RNAcompete
Ray et al.(2013)
RNCMPT00044 		0.716
Pcbp1
M207_0.6 		Mus musculus CYUUCC RNAcompete
Ray et al.(2013)
RNCMPT00239 		0.705
PCBP1
M177_0.6 		Homo sapiens CCWWHCC RNAcompete
Ray et al.(2013)
RNCMPT00186 		0.705
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSCJAP00000010746 KH 19 79
ENSCJAP00000010746 KH 103 131
ENSCJAP00000010746 KH 200 262
ENSCJAP00000010762 KH 26 57
ENSCJAP00000010762 KH 83 145
ENSCJAP00000010776 KH 11 45
ENSCJAP00000010776 KH 69 132
ENSCJAP00000010776 KH 209 271
ENSCJAP00000010813 KH 19 79
ENSCJAP00000010813 KH 103 166
ENSCJAP00000010813 KH 243 305
ENSCJAP00000010833 KH 19 79
ENSCJAP00000010833 KH 103 166
ENSCJAP00000010833 KH 243 305

Links

Other KH family RBPs
Other Callithrix jacchus RBPs

100 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AAH41241 Xenopus laevis AAH41241 I 0.721
AAH84195 Xenopus laevis AAH84195 I 0.721
Ame_R002707 Ailuropoda melanoleuca Ame_R002707 I 0.705
CAB50743 Xenopus laevis CAB50743 I 0.721
CAD29864 Xenopus laevis CAD29864 I 0.721
D3ZWQ9_RAT Rattus norvegicus ENSRNOG00000038946 N 0.825
ENSACAG00000000783 Anolis carolinensis ENSACAG00000000783 I 0.716
ENSACAG00000009819 Anolis carolinensis ENSACAG00000009819 I 0.779
ENSCJAG00000034075 Callithrix jacchus ENSCJAG00000034075 I 0.711
ENSCPOG00000000967 Cavia porcellus ENSCPOG00000000967 I 0.716
ENSGACG00000003044 Gasterosteus aculeatus ENSGACG00000003044 I 0.720
ENSGACG00000006681 Gasterosteus aculeatus ENSGACG00000006681 I 0.700
ENSLAFG00000013187 Loxodonta africana ENSLAFG00000013187 I 0.716
ENSMGAG00000006794 Meleagris gallopavo ENSMGAG00000006794 I 0.742
ENSMODG00000000280 Monodelphis domestica ENSMODG00000000280 I 0.716
ENSOCUG00000022490 Oryctolagus cuniculus ENSOCUG00000022490 I 0.716
ENSORLG00000005176 Oryzias latipes ENSORLG00000005176 I 0.711
ENSORLG00000012872 Oryzias latipes ENSORLG00000012872 I 0.705
ENSORLG00000014385 Oryzias latipes ENSORLG00000014385 I 0.737
ENSPPYG00000004581 Pongo pygmaeus ENSPPYG00000004581 I 0.716
ENSPPYG00000012328 Pongo pygmaeus ENSPPYG00000012328 I 0.705
ENSPPYG00000013822 Pongo pygmaeus ENSPPYG00000013822 I 1.000
ENSTRUG00000009361 Takifugu rubripes ENSTRUG00000009361 I 0.700
ENSTRUG00000011419 Takifugu rubripes ENSTRUG00000011419 I 0.711
ENSTRUG00000017789 Takifugu rubripes ENSTRUG00000017789 I 0.714
LOC100050101 Equus caballus ENSECAG00000012413 I 0.742
LOC100050579 Equus caballus ENSECAG00000002544 I 0.705
LOC100060660 Equus caballus ENSECAG00000024218 I 1.000
LOC100392590 Callithrix jacchus ENSCJAG00000018590 I 0.705
LOC100408015 Callithrix jacchus ENSCJAG00000001903 I 0.742
PCBP1 Gorilla gorilla ENSGGOG00000028130 I 0.705
Pcbp1 Rattus norvegicus ENSRNOG00000017708 I 0.705
Pcbp1 Mus musculus ENSMUSG00000051695 D 0.705
PCBP1 Tetraodon nigroviridis ENSTNIG00000012585 I 0.700
PCBP1 Cavia porcellus ENSCPOG00000013511 I 0.705
PCBP1 Homo sapiens ENSG00000169564 D 0.705
PCBP1 Pan troglodytes ENSPTRG00000012025 I 0.705
PCBP1 Myotis lucifugus ENSMLUG00000014173 I 0.705
PCBP1_BOVIN Bos taurus ENSBTAG00000008985 I 0.705
PCBP1_RABIT Oryctolagus cuniculus ENSOCUG00000003634 I 0.705
Pcbp2 Mus musculus ENSMUSG00000056851 I 0.716
PCBP2 Sus scrofa ENSSSCG00000000274 I 0.716
PCBP2 Tursiops truncatus ENSTTRG00000017174 I 0.716
PCBP2 Ochotona princeps ENSOPRG00000004680 I 0.716
PCBP2 Procavia capensis ENSPCAG00000005154 I 0.716
PCBP2 Pan troglodytes ENSPTRG00000005018 I 0.716
PCBP2 Pteropus vampyrus ENSPVAG00000012284 I 0.716
PCBP2 Gorilla gorilla ENSGGOG00000012613 I 0.716
PCBP2 Microcebus murinus ENSMICG00000011651 I 0.716
PCBP2 Macaca mulatta ENSMMUG00000006608 I 0.716
PCBP2 Canis familiaris ENSCAFG00000006821 I 0.716
pcbp2 Danio rerio ENSDARG00000013184 D 0.716
PCBP2 Equus caballus ENSECAG00000022389 I 0.716
PCBP2 Dasypus novemcinctus ENSDNOG00000008688 I 0.716
PCBP2 Homo sapiens ENSG00000197111 D 0.716
PCBP3 Gallus gallus ENSGALG00000004394 I 0.716
PCBP3 Gasterosteus aculeatus ENSGACG00000002266 I 0.732
PCBP3 Homo sapiens ENSG00000183570 I 0.742
PCBP3 Pan troglodytes ENSPTRG00000014010 I 0.742
PCBP3 Cavia porcellus ENSCPOG00000003648 I 0.742
Pcbp3 Rattus norvegicus ENSRNOG00000001245 I 0.742
PCBP3 Takifugu rubripes ENSTRUG00000006280 I 0.726
PCBP3 Tetraodon nigroviridis ENSTNIG00000010615 I 0.732
PCBP3 Gallus gallus ENSGALG00000013155 I 0.774
PCBP3 Gorilla gorilla ENSGGOG00000003683 I 0.742
PCBP3 Takifugu rubripes ENSTRUG00000013604 I 0.732
PCBP3 Anolis carolinensis ENSACAG00000004607 I 0.742
Pcbp3 Mus musculus ENSMUSG00000001120 D 0.742
PCBP3 Macaca mulatta ENSMMUG00000003825 I 0.742
PCBP3 Gasterosteus aculeatus ENSGACG00000014955 I 0.732
pcbp3 Xenopus tropicalis ENSXETG00000012658 I 0.721
PCBP3 Oryctolagus cuniculus ENSOCUG00000002696 I 0.742
PCBP3 Meleagris gallopavo ENSMGAG00000001883 I 0.742
PCBP3 Macropus eugenii ENSMEUG00000012960 I 0.721
PCBP3 Oryzias latipes ENSORLG00000000059 I 0.707
PCBP3 Tursiops truncatus ENSTTRG00000015075 I 0.742
PCBP3-2 Taeniopygia guttata ENSTGUG00000008158 I 0.768
PCBP4 Canis familiaris ENSCAFG00000010019 I 1.000
PCBP4 Tetraodon nigroviridis ENSTNIG00000017887 I 0.772
PCBP4 Takifugu rubripes ENSTRUG00000007426 I 0.778
PCBP4 Cavia porcellus ENSCPOG00000014617 I 0.995
PCBP4 Anolis carolinensis ENSACAG00000011701 I 0.941
PCBP4 Taeniopygia guttata ENSTGUG00000006393 I 0.899
PCBP4 Monodelphis domestica ENSMODG00000011790 I 0.941
Pcbp4 Mus musculus ENSMUSG00000023495 I 1.000
PCBP4 Ornithorhynchus anatinus ENSOANG00000014110 I 0.968
PCBP4 Oryctolagus cuniculus ENSOCUG00000025336 I 1.000
PCBP4 Loxodonta africana ENSLAFG00000010732 N 0.994
PCBP4 Oryzias latipes ENSORLG00000003061 I 0.725
PCBP4 Gorilla gorilla ENSGGOG00000012474 I 1.000
PCBP4 Gasterosteus aculeatus ENSGACG00000002664 I 0.778
PCBP4 Macaca mulatta ENSMMUG00000022205 I 1.000
PCBP4 Homo sapiens ENSG00000090097 I 1.000
Pcbp4 Rattus norvegicus ENSRNOG00000012406 I 1.000
Pcbp4 Dipodomys ordii ENSDORG00000000573 N 0.827
PCBP4 Pan troglodytes ENSPTRG00000014983 I 1.000
PCBP4_BOVIN Bos taurus ENSBTAG00000018622 I 1.000
Q17QV0_BOVIN Bos taurus ENSBTAG00000030775 I 0.732
Q3SYT9_BOVIN Bos taurus ENSBTAG00000020757 I 0.716