GRMZM2G085582 (Zea mays)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 GRMZM2G085582 T21366_0.6 MaizeSequence (2009-Oct-16)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
GRMZM2G085582_P01 KH 139 221
GRMZM2G085582_P02 KH 31 115
GRMZM2G085582_P03 KH 91 175

Links

Other KH family RBPs
Other Zea mays RBPs

51 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
27955.m000377 Ricinus communis 27955.m000377 N 0.711
AC218972.3_FG007 Zea mays AC218972.3_FG007 N 0.859
B9IGX2_POPTR Populus trichocarpa POPTR_0006s11210 N 0.718
B9INJ7_POPTR Populus trichocarpa POPTR_0019s15270 N 0.735
BGIOSIBCE004076 Oryza indica BGIOSIBCE004076 N 0.742
BGIOSIBCE019437 Oryza indica BGIOSIBCE019437 N 0.918
BGIOSIBCE024206 Oryza indica BGIOSIBCE024206 N 0.753
BRADI1G04120 Brachypodium distachyon BRADI1G04120 N 0.735
BRADI1G53760 Brachypodium distachyon BRADI1G53760 N 0.765
BRADI2G22090 Brachypodium distachyon BRADI2G22090 N 0.918
cassava39581.m1 Manihot esculenta cassava39581.m1 N 0.723
chr3.CM0634.210.nc Lotus japonicus chr3.CM0634.210.nc N 0.706
Cucsa.130740 Cucumis sativus Cucsa.130740 N 0.729
Cucsa.177080 Cucumis sativus Cucsa.177080 N 0.723
Glyma02g40440.1 Glycine max Glyma02g40440.1 N 0.706
Glyma03g00370.1 Glycine max Glyma03g00370.1 N 0.788
Glyma09g40820.1 Glycine max Glyma09g40820.1 N 0.741
Glyma11g31530.1 Glycine max Glyma11g31530.1 N 0.723
Glyma14g38730.1 Glycine max Glyma14g38730.1 N 0.706
Glyma16g34750.1 Glycine max Glyma16g34750.1 N 0.735
Glyma18g05680.1 Glycine max Glyma18g05680.1 N 0.765
Glyma18g44980.1 Glycine max Glyma18g44980.1 N 0.753
GRMZM2G063643 Zea mays GRMZM2G063643 N 0.711
GRMZM2G093006 Zea mays GRMZM2G093006 N 0.882
GRMZM2G108677 Zea mays GRMZM2G108677 N 0.711
GRMZM2G122569 Zea mays GRMZM2G122569 N 0.976
GRMZM2G472052 Zea mays GRMZM2G472052 N 0.807
LjT28H07.110.nc Lotus japonicus LjT28H07.110.nc N 0.741
LOC_Os01g60260 Oryza sativa LOC_Os01g60260 N 0.847
LOC_Os03g60110 Oryza sativa LOC_Os03g60110 N 0.711
LOC_Os05g40290 Oryza sativa LOC_Os05g40290 N 0.918
LOC_Os07g12490 Oryza sativa LOC_Os07g12490 N 0.741
MDP0000119110 Malus x domestica MDP0000119110 N 0.723
MDP0000186494 Malus x domestica MDP0000186494 N 0.747
MDP0000501473 Malus x domestica MDP0000501473 N 0.723
MDP0000665847 Malus x domestica MDP0000665847 N 0.747
Medtr3g083820 Medicago truncatula Medtr3g083820 N 0.706
Medtr5g083520 Medicago truncatula Medtr5g083520 N 0.723
Medtr7g080640 Medicago truncatula Medtr7g080640 N 0.706
Medtr8g005290 Medicago truncatula Medtr8g005290 N 0.747
Medtr8g005390 Medicago truncatula Medtr8g005390 N 0.747
PDK_20s1595621g003 Phoenix dactylifera PDK_20s1595621g003 N 0.747
PK22673.1 Cannabis sativa PK22673.1 N 0.729
PK23097.1 Cannabis sativa PK23097.1 N 0.735
POPTR_0016s14760 Populus trichocarpa POPTR_0016s14760 N 0.759
ppa009701m Prunus persica ppa009701m N 0.741
SB01G003680 Sorghum bicolor Sb01g003680 N 0.723
SB02G006770 Sorghum bicolor Sb02g006770 N 0.747
SB03G038070 Sorghum bicolor Sb03g038070 N 0.882
SB09G023640 Sorghum bicolor Sb09g023640 N 0.976